prot_C-linearis_contig74.15060.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig74.15060.1
Unique Nameprot_C-linearis_contig74.15060.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length481
Homology
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BLAST of mRNA_C-linearis_contig74.15060.1 vs. uniprot
Match: D7G1Q6_ECTSI (EF hand family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1Q6_ECTSI)

HSP 1 Score: 627 bits (1618), Expect = 1.130e-221
Identity = 332/486 (68.31%), Postives = 377/486 (77.57%), Query Frame = 0 
Query:    4 SLSSSMFAGYNKFDEAKIRIGSWREELALKELTGVTRLANPRNKAVFNATDVRVLYHADNPGAKNANEGKSVSETSFVHPQKVSATKDRAAYIQPGPRAVRAKQAAIAIVEAEEAEQASLETEN--EGDFDTTFRQSYKRYSNAAAKEAKQESVKPKPHGSEQTP----KALVLDNDRSANCTTTAAPETETTIRHYSTGATVTLWNTGGMAPGGTHGKDSFGRKSRFTEPGVHPSFSQEVWPDPGPHHSSLPRGLSDLEAASLMFLKRRVIERVQEKPLPSIRGLWCLLWARTYRDAVGKIGPREFQGGMAAFEVPVTQCEVWAVTTAFDTDGSGQICLDKLIHFFRAGGFSETRRQTTHKLFRDLDPTNAGAVYLDRIRAACDFSSLPAVANGKAREEEATAAFLAHFNKNNRGDRHDEGSMMVSVEHFQEGFRDIGTACIPLEACSWEAERPRERAKLEG---IDADMDRDDATFVGVVSCLG 480
            SL S+MFAGYNKFD+AK+RIGSWREELA+KELTGVTRLANPRN+AVFNATDVRVLYHAD PGAK+A  GKS S TS++HP+KV+ATK+R+AYI+PGPRAVR++QAA  IV+AEEAE+ +LE E   +GDFDTTFRQSYKRYS+ A++ AKQ+SVKP+P  + Q P    KA      RS +  +         + HYSTG TVTLWNTGGMAPGGT  + SFGR SRFTEPGVHPSF QEVW DPGPHH+SLPRGLSDLEA SLMFLK RVIER QEKPLPS+RGLW LLW RTY DAVGK+GP EF+ GMA FEVPVT+CEVWAVTTAFDTD  GQICLDKL+HFFRAGG SE RR+  HKLFR LD  N GAV L  IRAACDFSS PAV  GKA EEE T  FL H  +NN  +   E S MV+ EHFQ+ FRDIGTAC  L ACSWEA   +E  K  G    DAD +  +A F+GVVS +G
Sbjct:    3 SLRSAMFAGYNKFDDAKVRIGSWREELAMKELTGVTRLANPRNRAVFNATDVRVLYHADKPGAKDAGRGKSESHTSYIHPEKVAATKERSAYIRPGPRAVRSRQAAKEIVQAEEAEREALEREKKKDGDFDTTFRQSYKRYSDEASRAAKQDSVKPQPENAPQAPAPTTKAFKNSMRRSGDVMSEIGE-----VGHYSTGTTVTLWNTGGMAPGGTADRASFGRTSRFTEPGVHPSFFQEVWRDPGPHHASLPRGLSDLEARSLMFLKNRVIERAQEKPLPSVRGLWRLLWPRTYVDAVGKVGPAEFREGMAEFEVPVTKCEVWAVTTAFDTDNRGQICLDKLMHFFRAGGLSEARRKVVHKLFRGLDSANTGAVPLSSIRAACDFSSSPAVIEGKACEEEITTEFLQHL-QNNEQEGLGESSSMVTAEHFQDAFRDIGTACTSLAACSWEAASLQEEKKDRGHLDTDADGNAGEALFMGVVSSVG 482
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BLAST of mRNA_C-linearis_contig74.15060.1 vs. uniprot
Match: A0A6H5L3H9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3H9_9PHAE)

HSP 1 Score: 497 bits (1279), Expect = 1.260e-170
Identity = 280/455 (61.54%), Postives = 315/455 (69.23%), Query Frame = 0 
Query:    4 SLSSSMFAGYNKFDEAKIRIGSWREELALKELTGVTRLANPRNKAVFNATDVRVLYHADNPGAKNANEGKSVSETSFVHPQKVSATKDRAAYIQPGPRAVRAKQAAIAIVEAEEAEQASLETEN--EGDFDTTFRQSYKRYSNAAAKEAKQESVKPKPHGSEQ--------------TPK-------ALVLDNDRSANCTTTAAPETETTIR------------------HYSTGATVTLWNTGGMAPGGTHGKDSFGRKSRFTEPGVHPSFSQEVWPDPGPHHSSLPRGLSDLEAASLMFLKRRVIERVQEKPLPSIRGLWCLLWARTYRDAVGKIGPREFQGGMAAFEVPVTQCEVWAVTTAFDTDGSGQ-------------------------ICLDKLIHFFRAGGFSETRRQTTHKLFRDLDPTNAGAVYLDRIRAACDFSSLPAVANG 392
            SL S+MFAGYNKFD+AK+RIGSWREELA+KELTGVTRLANPRNKAVFNATDVRVLYHAD PGAK+A  G S S TS++HP+KV+ATK+R+AYI+PGPRAVR++ AA  IV AEEAE+ +LE E   +GDFDTTFRQSYKRYS+ A++ AKQ+SVKP+P  + Q               PK          L +  +A    T AP   T +                   HYSTG TVTLWNTGGMA GG   + S GR SRFTEPGVHPSFSQEVWPD GPHH+SLPRGLSDLEA SLMFLK+RVIER QEKPLPS+RGLW     RTY DAVGKIGP EF+ GMA FEVPVT+CEVW VTTAFDT+  GQ                         ICLDKLIHFFRAGG SE RR+  H+LFR LD  N GAV L  IRA CDFSS PAV  G
Sbjct:    3 SLRSAMFAGYNKFDDAKVRIGSWREELAMKELTGVTRLANPRNKAVFNATDVRVLYHADKPGAKDAGRGTSESHTSYIHPEKVAATKERSAYIRPGPRAVRSRLAAKEIVLAEEAEREALEREKKKDGDFDTTFRQSYKRYSDEASRAAKQDSVKPQPENAPQGNHPTDIFKPTWQPIPKLPADLFVTKYLCSGHAARAVPTKAPAPSTKVLKNGMTRGGDAMSEIGEGGHYSTGTTVTLWNTGGMARGGKADRASLGRTSRFTEPGVHPSFSQEVWPDAGPHHASLPRGLSDLEARSLMFLKKRVIERAQEKPLPSMRGLW----PRTYADAVGKIGPAEFREGMAEFEVPVTKCEVWVVTTAFDTNNRGQEDAQRHGLHRSFKTKATNDFPVILQICLDKLIHFFRAGGLSEARRKVVHELFRGLDSANTGAVPLSSIRAVCDFSSSPAVIRG 453
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig74.15060.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G1Q6_ECTSI1.130e-22168.31EF hand family protein n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5L3H9_9PHAE1.260e-17061.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 350..442
e-value: 1.1E-9
score: 40.7
NoneNo IPR availablePANTHERPTHR34524FAMILY NOT NAMEDcoord: 279..430
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 296..430

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig74contigC-linearis_contig74:841107..847116 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig74.15060.1mRNA_C-linearis_contig74.15060.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig74 841107..847116 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig74.15060.1 ID=prot_C-linearis_contig74.15060.1|Name=mRNA_C-linearis_contig74.15060.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=481bp
MPSSLSSSMFAGYNKFDEAKIRIGSWREELALKELTGVTRLANPRNKAVF
NATDVRVLYHADNPGAKNANEGKSVSETSFVHPQKVSATKDRAAYIQPGP
RAVRAKQAAIAIVEAEEAEQASLETENEGDFDTTFRQSYKRYSNAAAKEA
KQESVKPKPHGSEQTPKALVLDNDRSANCTTTAAPETETTIRHYSTGATV
TLWNTGGMAPGGTHGKDSFGRKSRFTEPGVHPSFSQEVWPDPGPHHSSLP
RGLSDLEAASLMFLKRRVIERVQEKPLPSIRGLWCLLWARTYRDAVGKIG
PREFQGGMAAFEVPVTQCEVWAVTTAFDTDGSGQICLDKLIHFFRAGGFS
ETRRQTTHKLFRDLDPTNAGAVYLDRIRAACDFSSLPAVANGKAREEEAT
AAFLAHFNKNNRGDRHDEGSMMVSVEHFQEGFRDIGTACIPLEACSWEAE
RPRERAKLEGIDADMDRDDATFVGVVSCLG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011992EF-hand-dom_pair