prot_C-linearis_contig74.15047.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig74.15047.1
Unique Nameprot_C-linearis_contig74.15047.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length766
Homology
BLAST of mRNA_C-linearis_contig74.15047.1 vs. uniprot
Match: A0A6H5KU86_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU86_9PHAE)

HSP 1 Score: 437 bits (1123), Expect = 1.340e-135
Identity = 340/598 (56.86%), Postives = 370/598 (61.87%), Query Frame = 0
Query:   62 APDNGGRENGSSAGDRGREARAGQHNRGGSPPRDRQNEAGKRSREELSLSPPNGPVKYAARSDRDPRAXXXXXXXXXXXXXXXXXXXXXXXXAGSKDSRSPPAGQGFDWQPDHPPPFLSLPSPAAQGXXXXXXXXXXXXRYGPPSVLPGAGA--------------SYVSLPR----PPPAXXXPLSQPPQGSMRVVYTTMPPQQXXXXXXXXXXXXXXXXXXX---FISRPATTLGTTXXXXXXXXXXXXXXXXXXXXXXXXXXLFTPPXAXXXXXXXXXXXXXXXXXXXXXXXXXXXLPMMMRATPXXXXXXXXXXXXXXAAAAXTTAATSTPATRRRGGLKKSSS---PGGPKLRVRVSDAEPEAQEAPIFSSDXXXXXXXXXX--RDMRGEWPHEFKFRPQVGG-RKECTVCGKDFVRICTACGKCMECFRGGDRECVEGATASKPTPRRLSPPPDDVLDERDWPEYPRTMTRNVDGTSVLEKRMERAIYEAIRSGDTEPIVGLIRAGVSPNFKRPAGETCLHAAAYCGSLGLVKDLIARNADASLKDSHGNLPVDLAAMQGKDEVVGFLQPLAPSKTPFTIAAHQRHRRVAQE 632
            +P  GGR NG+      R +     +RGGSP R   + +GKR RE+ SLSPP GP KY ARS RDPR  XXXXXXXXXXXXXXXXXXXXXXX       S  AGQ  DW+ +  PP L+LPSPAAQ           XX      + P  GA              S+VSLP     PPP     L  PP G  R++Y  +PP  XXXXXX   XXXX          ++ P TTLG                            LFTPP    XXXX                     +PM   A P  X  XXXXXXXXX                RRGGLKK S      G KL VRVSDAEP AQEAP+FSSD            RD RGEWPHEFKFRPQ+GG RK C VCGKDFVRICTACGKCMECFR GDR+CVEGA  + P PRRLSPPP+ + DER+WPEYP+TMTRN DGTSVLEKRMERAIYEAIR GDTEPIVGLIRAGVSPNFKRPAGETCLHAAAYCG+L LVKDL  R AD ++KDSHGNLPVDLAAMQGKDEVVGFLQPLAPSKTPFTIAAHQRHRRV+QE
Sbjct:  448 SPSGGGRANGN------RSSSTWDGSRGGSPTRP-PSTSGKRGREQSSLSPPRGPAKYTARSGRDPRGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS--AGQ--DWRQERRPPSLALPSPAAQAAATAPGTSPSXXXX--QQLQPSYGAXXXXXXXXXXXXXVSFVSLPAASPAPPPRPLLSLPHPPHGPPRLMYAVLPPXXXXXXXXPQPXXXXPQFVIQPGMTVTVPGTTLGAAAGPIMLRPPAPL--------------LFTPPPVTAXXXXVAPSTAVPLSLP---------MPMAPAAPPRPXTFXXXXXXXXXXXRKP-----------RRGGLKKPSQGXXXXGLKLTVRVSDAEPSAQEAPVFSSDDEDDDKPGRVSRRDTRGEWPHEFKFRPQLGGSRKVCAVCGKDFVRICTACGKCMECFRAGDRDCVEGAVNNTP-PRRLSPPPEALPDEREWPEYPKTMTRNKDGTSVLEKRMERAIYEAIRLGDTEPIVGLIRAGVSPNFKRPAGETCLHAAAYCGALDLVKDLAERKADPAVKDSHGNLPVDLAAMQGKDEVVGFLQPLAPSKTPFTIAAHQRHRRVSQE 997          
BLAST of mRNA_C-linearis_contig74.15047.1 vs. uniprot
Match: D8LD31_ECTSI (Ankyrin repeat-containing protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD31_ECTSI)

HSP 1 Score: 375 bits (964), Expect = 7.270e-122
Identity = 187/231 (80.95%), Postives = 199/231 (86.15%), Query Frame = 0
Query:  393 KLRVRVSDAEPEAQEAPIFSSDXXXXXXXXXXR-DMRGEWPHEFKFRPQVGG-RKECTVCGKDFVRICTACGKCMECFRGGDRECVEGATASKPTPRRLSPPPDDVLDERDWPEYPRTMTRNVDGTSVLEKRMERAIYEAIRSGDTEPIVGLIRAGVSPNFKRPAGETCLHAAAYCGSLGLVKDLIARNADASLKDSHGNLPVDLAAMQGKDEVVGFLQPLAPSKTPFTIA 621
            KL VRVSDAEP AQEAP+FSSD          R D RGEWPHEFKFRPQ+GG RK C VCGKDFVRICTACGKCMECFR G+R+CVEGA  + P PRRLSPPP+ + DER+WPEYP+TMTRN DGTSVLEKRMERAIYEAIR GDTEPIVGLIRAGVSPNFKRPAGETCLHAAAYCG+L LVKDL  R AD ++KDSHGNLPVDLAAMQGKD VVGFLQPLAPSKTPFTIA
Sbjct:   46 KLTVRVSDAEPSAQEAPVFSSDDDDDKPGGVSRRDTRGEWPHEFKFRPQLGGSRKVCAVCGKDFVRICTACGKCMECFRAGNRDCVEGAVNNTP-PRRLSPPPEALPDEREWPEYPKTMTRNKDGTSVLEKRMERAIYEAIRLGDTEPIVGLIRAGVSPNFKRPAGETCLHAAAYCGALDLVKDLAERKADPAVKDSHGNLPVDLAAMQGKDAVVGFLQPLAPSKTPFTIA 275          
BLAST of mRNA_C-linearis_contig74.15047.1 vs. uniprot
Match: A0A7S3NJJ4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NJJ4_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 2.140e-12
Identity = 41/95 (43.16%), Postives = 59/95 (62.11%), Query Frame = 0
Query:  517 SVLEKRMERAIYEAIRSGDTEPIVGLIRAGVSPNFKRPAGETCLHAAAYCGSLGLVKDLIARNADASLKDSHGNLPVDLAAMQGKDEVVGFLQPL 611
            S+L KRM+RAI++A RS + EP++ L+  G S N+ R + ET L AAAYCG   + K L+   AD    DS GN  V LA +QG +++  ++  L
Sbjct:  471 SILAKRMDRAIWDAFRSAEFEPLLSLLDHGASANYSRLSKETALMAAAYCGRDDVAKRLLELGADPEATDSQGNTAVTLARVQGHNQLAEYIHGL 565          
BLAST of mRNA_C-linearis_contig74.15047.1 vs. uniprot
Match: A0A835YL10_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL10_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 2.960e-9
Identity = 61/224 (27.23%), Postives = 88/224 (39.29%), Query Frame = 0
Query:  433 HEFKFRPQVGGRKECTVCGKDFVRICTACGKCMECFRG---GDRECVEGATASKPTPRR--------------------------LSPPPDDVLDERDWPEYPRTMTRNVDGTS----------------------VLEKRMERAIYEAIRSGDTEP----IVGLIRAGVSPNFKRPAGETCLHAAAYCGSLGLVKDLIARNADASLKDSHGNLPVDLAAMQGK 601
            H F++R        CT+C    VRIC+AC +C+ C+R    G   C  G  + + +P                            L  P  ++  +   P   R       G                         L+ R++RAIY A  S   E     ++ L+R     N++R  GET LHAAAY G+L   + ++   ADA   DSHGN P+DLA   G+
Sbjct:  700 HRFRYRNVTA--PGCTLCELTHVRICSACSRCVCCYREERFGPACCETGDESGRWSPPTDASSXXXXXXXXXXXXXXXXXXXXXILRKPKPEIAGDAWRPGGKRDAGGGGGGNDXXXXXXXXXXXXXXPAGAPKLHTLQGRVDRAIYAAFTSDGKEERFAALLALLRHSGLHNYRRQTGETALHAAAYHGALRAARAMLDGGADADASDSHGNTPLDLARQHGR 921          
BLAST of mRNA_C-linearis_contig74.15047.1 vs. uniprot
Match: A0A836C7D4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7D4_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 2.070e-6
Identity = 34/83 (40.96%), Postives = 47/83 (56.63%), Query Frame = 0
Query:  518 VLEKRMERAIYEAIRSGDTEP----IVGLIRAGVSPNFKRPAGETCLHAAAYCGSLGLVKDLIARNADASLKDSHGNLPVDLA 596
             L+ R++RAIY A  S   E     ++ L+R     N++R  GET LHAAAY G+L   + ++   A     DSHGN P+DLA
Sbjct:  798 ALQGRVDRAIYAAFTSDGKEESFAALLALLRHSALHNYRRQTGETALHAAAYHGALRAARAMLDGGAAPGAADSHGNTPLDLA 880          
BLAST of mRNA_C-linearis_contig74.15047.1 vs. uniprot
Match: A0A672H3I0_SALFA (Uncharacterized protein n=1 Tax=Salarias fasciatus TaxID=181472 RepID=A0A672H3I0_SALFA)

HSP 1 Score: 53.9 bits (128), Expect = 4.690e-5
Identity = 33/91 (36.26%), Postives = 44/91 (48.35%), Query Frame = 0
Query:  522 RMERAIYEAIRSGDTEPIVGLIRAGVSPNFK-RPAGETCLHAAAYCGSLGLVKDLIARNADASLKDSHGNLPVDLAAMQGKDEVVGFLQPL 611
            R  R   + +  G T     L++ G  PN   R  G T LH AA  G L  V+ L+   AD   +D   ++P DLAA  G ++V  FLQ L
Sbjct:   36 RFGRTALQVMMMGSTPVAQVLLKHGADPNVADRSTGATPLHDAARTGFLDTVRLLVHFGADPRARDHANDVPADLAAQHGHEDVASFLQTL 126          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig74.15047.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5KU86_9PHAE1.340e-13556.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LD31_ECTSI7.270e-12280.95Ankyrin repeat-containing protein, putative n=1 Ta... [more]
A0A7S3NJJ4_9STRA2.140e-1243.16Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A835YL10_9STRA2.960e-927.23Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836C7D4_9STRA2.070e-640.96Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A672H3I0_SALFA4.690e-536.26Uncharacterized protein n=1 Tax=Salarias fasciatus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 620..662
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 293..318
score: 34.62
coord: 189..210
score: 39.09
coord: 217..233
score: 32.94
coord: 173..185
score: 30.77
NoneNo IPR availablePFAMPF13857Ank_5coord: 542..596
e-value: 4.6E-11
score: 42.7
NoneNo IPR availablePANTHERPTHR14445:SF41coord: 141..311
coord: 394..668
NoneNo IPR availablePANTHERPTHR14445GRB10 INTERACTING GYF PROTEINcoord: 141..311
coord: 394..668
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 555..584
e-value: 0.18
score: 20.9
coord: 522..551
e-value: 1300.0
score: 4.1
coord: 588..617
e-value: 960.0
score: 5.1
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 555..587
score: 10.846
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 508..671
e-value: 1.1E-22
score: 82.2
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 526..631
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 522..608
score: 19.624

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig74contigC-linearis_contig74:697102..699859 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig74.15047.1mRNA_C-linearis_contig74.15047.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig74 696130..700574 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig74.15047.1 ID=prot_C-linearis_contig74.15047.1|Name=mRNA_C-linearis_contig74.15047.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=766bp
MKEGDNSEQRGEKPLTPPEGGRRREGRGEEAEEDGEGESRWQSSPLRALK
KAKTIRDGDNTAPDNGGRENGSSAGDRGREARAGQHNRGGSPPRDRQNEA
GKRSREELSLSPPNGPVKYAARSDRDPRAARAAAAASEAPGQQQQQQQQE
RGDAGSKDSRSPPAGQGFDWQPDHPPPFLSLPSPAAQGPAPAPSLPVPQP
RYGPPSVLPGAGASYVSLPRPPPAPPQPLSQPPQGSMRVVYTTMPPQQQR
QQQQQQQQQHQQQHQQQFISRPATTLGTTTTTTATARTLSAAPAAATTLP
RPPPPLFTPPPAPAPAPAPVSVSVAVSAAPAAGAGVSVSLPMMMRATPPR
PPPPFLAPVPAPAAAAATTAATSTPATRRRGGLKKSSSPGGPKLRVRVSD
AEPEAQEAPIFSSDDEDGGGGSRRRDMRGEWPHEFKFRPQVGGRKECTVC
GKDFVRICTACGKCMECFRGGDRECVEGATASKPTPRRLSPPPDDVLDER
DWPEYPRTMTRNVDGTSVLEKRMERAIYEAIRSGDTEPIVGLIRAGVSPN
FKRPAGETCLHAAAYCGSLGLVKDLIARNADASLKDSHGNLPVDLAAMQG
KDEVVGFLQPLAPSKTPFTIAAHQRHRRVAQEQKQKQQEKEKEKEQKQQQ
QQQQQQQQQQQQPQQQQAVLSAPPRLHQVVVGFTPPPPPPPPHQPQLQAF
HQHQQQQQQQPQHLPMQLQQRPPLFAPPPVLPLQYHVQYAPEQQPQQQPQ
PQRPESGGAQQPEQR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom