prot_C-linearis_contig74.15036.1 (polypeptide) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig74.15036.1 vs. uniprot
Match: D8LD43_ECTSI (Small nuclear ribonucleoprotein E n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD43_ECTSI) HSP 1 Score: 180 bits (457), Expect = 2.310e-57 Identity = 94/97 (96.91%), Postives = 95/97 (97.94%), Query Frame = 0
Query: 1 MSGFGGG-RGGGARVKKVMTQPISLIFRFLQNRTRVQIWLYENTKMRIEGQILGFDEYMNLVLDEAEEVDMKSDERKQLGRIMLKGDTITLMQSVEV 96
MSGFGGG RGGG RVKKVMTQPISLIFRFLQNRTRVQIWLYENTKMRIEGQILGFDEYMNLVLDEAEEVDMK+DERKQLGRIMLKGDTITLMQSVEV
Sbjct: 1 MSGFGGGGRGGGGRVKKVMTQPISLIFRFLQNRTRVQIWLYENTKMRIEGQILGFDEYMNLVLDEAEEVDMKNDERKQLGRIMLKGDTITLMQSVEV 97
BLAST of mRNA_C-linearis_contig74.15036.1 vs. uniprot
Match: A0A835YX06_9STRA (Small nuclear ribonucleoprotein E n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX06_9STRA) HSP 1 Score: 150 bits (378), Expect = 2.750e-45 Identity = 78/98 (79.59%), Postives = 86/98 (87.76%), Query Frame = 0
Query: 1 MSGFGGGRG---GGARVKKVMTQPISLIFRFLQNRTRVQIWLYENTKMRIEGQILGFDEYMNLVLDEAEEVDMKSDERKQLGRIMLKGDTITLMQSVE 95
MSG+GG G GG R+KKVMTQPISLIFRFLQNRTRVQIWLYENT MRIEG+I GFDEYMNLVLDEAEEVD+K + R Q+GRI+LKGDTITLMQ V+
Sbjct: 1 MSGYGGRGGPPVGGQRMKKVMTQPISLIFRFLQNRTRVQIWLYENTTMRIEGRISGFDEYMNLVLDEAEEVDLKKNVRTQVGRILLKGDTITLMQGVD 98
BLAST of mRNA_C-linearis_contig74.15036.1 vs. uniprot
Match: A0A6U0Y1E1_9STRA (Small nuclear ribonucleoprotein E n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U0Y1E1_9STRA) HSP 1 Score: 137 bits (344), Expect = 3.940e-40 Identity = 68/95 (71.58%), Postives = 80/95 (84.21%), Query Frame = 0
Query: 1 MSGFGGGRGGGARVKKVMTQPISLIFRFLQNRTRVQIWLYENTKMRIEGQILGFDEYMNLVLDEAEEVDMKSDERKQLGRIMLKGDTITLMQSVE 95
MSG+G G GG RVKKVMTQPI+LIFRFLQNRTR+ IWLYEN+ IEG+I+GFDEYMNLVLD+A+E+D K + R LGRI+LKGDTITLMQ +
Sbjct: 1 MSGYGPG-GGSTRVKKVMTQPINLIFRFLQNRTRILIWLYENSNTMIEGRIVGFDEYMNLVLDDAQEIDQKQETRTDLGRILLKGDTITLMQEAQ 94
BLAST of mRNA_C-linearis_contig74.15036.1 vs. uniprot
Match: R1EMN3_EMIHU (Small nuclear ribonucleoprotein E n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1EMN3_EMIHU) HSP 1 Score: 132 bits (333), Expect = 1.430e-38 Identity = 63/83 (75.90%), Postives = 77/83 (92.77%), Query Frame = 0
Query: 13 RVKKVMTQPISLIFRFLQNRTRVQIWLYENTKMRIEGQILGFDEYMNLVLDEAEEVDMKSDERKQLGRIMLKGDTITLMQSVE 95
+V+K+MTQPI+LIFRFLQN+TRVQIWLYENT++RIEG+I+GFDEYMNLVLDEAEE+ MK ERK LGRI+LKGD+ITLM + +
Sbjct: 4 KVQKIMTQPINLIFRFLQNKTRVQIWLYENTELRIEGKIIGFDEYMNLVLDEAEELLMKKKERKPLGRILLKGDSITLMMTAQ 86
BLAST of mRNA_C-linearis_contig74.15036.1 vs. uniprot
Match: A0A6P8W5V7_GYMAC (Small nuclear ribonucleoprotein E n=6 Tax=Clupeocephala TaxID=186625 RepID=A0A6P8W5V7_GYMAC) HSP 1 Score: 132 bits (332), Expect = 2.290e-38 Identity = 65/89 (73.03%), Postives = 76/89 (85.39%), Query Frame = 0
Query: 8 RGGGARVKKVMTQPISLIFRFLQNRTRVQIWLYENTKMRIEGQILGFDEYMNLVLDEAEEVDMKSDERKQLGRIMLKGDTITLMQSVEV 96
RG G +V+KVM QPI+LIFR+LQNR+R+Q+WLYE MRIEG I+GFDEYMNLVLD+AEEV MK+ RK LGRIMLKGD ITL+QSV V
Sbjct: 4 RGQGQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEVHMKTKNRKPLGRIMLKGDNITLLQSVTV 92
BLAST of mRNA_C-linearis_contig74.15036.1 vs. uniprot
Match: Q6AZK6_XENTR (Small nuclear ribonucleoprotein E n=2 Tax=Tetrapoda TaxID=32523 RepID=Q6AZK6_XENTR) HSP 1 Score: 132 bits (331), Expect = 3.250e-38 Identity = 63/87 (72.41%), Postives = 76/87 (87.36%), Query Frame = 0
Query: 8 RGGGARVKKVMTQPISLIFRFLQNRTRVQIWLYENTKMRIEGQILGFDEYMNLVLDEAEEVDMKSDERKQLGRIMLKGDTITLMQSV 94
RG G +V+KVM QPI+LIFR+LQNR+R+Q+WLYE MRIEG I+GFDEYMNLVLD+AEE+ +K+ RKQLGRIMLKGD ITL+QSV
Sbjct: 4 RGQGQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHLKTKSRKQLGRIMLKGDNITLLQSV 90
BLAST of mRNA_C-linearis_contig74.15036.1 vs. uniprot
Match: A0A821IDN7_9NEOB (Small nuclear ribonucleoprotein E n=5 Tax=Euteleostomi TaxID=117571 RepID=A0A821IDN7_9NEOB) HSP 1 Score: 132 bits (331), Expect = 3.250e-38 Identity = 63/87 (72.41%), Postives = 76/87 (87.36%), Query Frame = 0
Query: 8 RGGGARVKKVMTQPISLIFRFLQNRTRVQIWLYENTKMRIEGQILGFDEYMNLVLDEAEEVDMKSDERKQLGRIMLKGDTITLMQSV 94
RG G +V+KVM QPI+LIFR+LQNR+R+Q+WLYE MRIEG I+GFDEYMNLVLD+AEE+ +K+ RKQLGRIMLKGD ITL+QSV
Sbjct: 4 RGQGPKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHLKTKSRKQLGRIMLKGDNITLLQSV 90
BLAST of mRNA_C-linearis_contig74.15036.1 vs. uniprot
Match: Q6GPZ6_XENLA (Small nuclear ribonucleoprotein E n=1 Tax=Xenopus laevis TaxID=8355 RepID=Q6GPZ6_XENLA) HSP 1 Score: 131 bits (330), Expect = 4.620e-38 Identity = 63/87 (72.41%), Postives = 76/87 (87.36%), Query Frame = 0
Query: 8 RGGGARVKKVMTQPISLIFRFLQNRTRVQIWLYENTKMRIEGQILGFDEYMNLVLDEAEEVDMKSDERKQLGRIMLKGDTITLMQSV 94
RG G +V+KVM QPI+LIFR+LQNR+RVQ+WLYE MRIEG I+GFDEYMN+VLD+AEE+ +K+ RKQLGRIMLKGD ITL+QSV
Sbjct: 4 RGQGQKVQKVMVQPINLIFRYLQNRSRVQVWLYEQVNMRIEGCIIGFDEYMNIVLDDAEEIHLKTKSRKQLGRIMLKGDNITLLQSV 90
BLAST of mRNA_C-linearis_contig74.15036.1 vs. uniprot
Match: A0A669EMR4_ORENI (Small nuclear ribonucleoprotein E n=31 Tax=Clupeocephala TaxID=186625 RepID=A0A669EMR4_ORENI) HSP 1 Score: 131 bits (329), Expect = 6.560e-38 Identity = 64/87 (73.56%), Postives = 75/87 (86.21%), Query Frame = 0
Query: 8 RGGGARVKKVMTQPISLIFRFLQNRTRVQIWLYENTKMRIEGQILGFDEYMNLVLDEAEEVDMKSDERKQLGRIMLKGDTITLMQSV 94
RG G +V+KVM QPI+LIFR+LQNR+R+Q+WLYE MRIEG I+GFDEYMNLVLD+AEEV MK+ RK LGRIMLKGD ITL+QSV
Sbjct: 4 RGQGQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEVHMKTKNRKPLGRIMLKGDNITLLQSV 90
BLAST of mRNA_C-linearis_contig74.15036.1 vs. uniprot
Match: A0A553MW39_9TELE (Small nuclear ribonucleoprotein E n=2 Tax=Osteoglossocephalai TaxID=1489341 RepID=A0A553MW39_9TELE) HSP 1 Score: 131 bits (329), Expect = 6.560e-38 Identity = 64/87 (73.56%), Postives = 75/87 (86.21%), Query Frame = 0
Query: 8 RGGGARVKKVMTQPISLIFRFLQNRTRVQIWLYENTKMRIEGQILGFDEYMNLVLDEAEEVDMKSDERKQLGRIMLKGDTITLMQSV 94
RG G +V+KVM QPI+LIFR+LQNR+R+Q+WLYE MRIEG I+GFDEYMNLVLD+AEEV MK+ RK LGRIMLKGD ITL+QSV
Sbjct: 4 RGQGQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEVHMKTKNRKPLGRIMLKGDNITLLQSV 90 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig74.15036.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_C-linearis_contig74.15036.1 ID=prot_C-linearis_contig74.15036.1|Name=mRNA_C-linearis_contig74.15036.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=97bpback to top |