prot_C-linearis_contig74.15024.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig74.15024.1
Unique Nameprot_C-linearis_contig74.15024.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length484
Homology
BLAST of mRNA_C-linearis_contig74.15024.1 vs. uniprot
Match: D8LD53_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD53_ECTSI)

HSP 1 Score: 295 bits (756), Expect = 3.020e-93
Identity = 158/193 (81.87%), Postives = 171/193 (88.60%), Query Frame = 0
Query:  290 VWVQCDTCKKWRRLPDFVDPDKLPAKWHCEMNSYDLARANCRAKQESTTATRLEXXXXXXXXXXXXXXXXXXXXXXXX------ESQAKDANLRRFLTAWARRLRCAEKAKTRLAPSMSTRGKRKAPSQAQWVRCQNCGKWRALLKCMDASVFMGHGQQFYCLMNTWHESLASCSAPQENQYTAEGLFPSPPP 476
            VWVQCDTCKKWRRLPDFVDPD+LP KWHCEMN YD ARANCRAKQES+TAT LE       XXXXXXXXXXXXXXXXX      ES+AKDANLRRFL+ WARR++CAEKAK++LAPSMSTRGKRKAPSQAQWVRCQNCGKWRALL+CMDAS+F+GHGQQFYCLMNTW+ESLASCSAPQENQYT + LFP P P
Sbjct:   67 VWVQCDTCKKWRRLPDFVDPDQLPLKWHCEMNIYDAARANCRAKQESSTATLLEAERKVRQXXXXXXXXXXXXXXXXXXXXXXXESRAKDANLRRFLSGWARRIKCAEKAKSKLAPSMSTRGKRKAPSQAQWVRCQNCGKWRALLRCMDASLFLGHGQQFYCLMNTWNESLASCSAPQENQYTVDALFPPPEP 259          
BLAST of mRNA_C-linearis_contig74.15024.1 vs. uniprot
Match: A0A6H5K0G2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0G2_9PHAE)

HSP 1 Score: 296 bits (759), Expect = 4.770e-92
Identity = 158/191 (82.72%), Postives = 171/191 (89.53%), Query Frame = 0
Query:  290 VWVQCDTCKKWRRLPDFVDPDKLPAKWHCEMNSYDLARANCRAKQESTTATRLEXXXXXXXXXXXXXXXXXXXXXXXX------ESQAKDANLRRFLTAWARRLRCAEKAKTRLAPSMSTRGKRKAPSQAQWVRCQNCGKWRALLKCMDASVFMGHGQQFYCLMNTWHESLASCSAPQENQYTAEGLFPSP 474
            VWVQCDTCKKWRRLPDFVDPD+LP KWHCEMN YD+ARANCRAKQES+TAT LE       XXXXXXXXXXXXXXXXX      ES+AKDANLRRFL+ WARR++CAEKAK++LAPSMSTRGKRKAPSQAQWVRCQNCGKWRALL+CMDAS+F+GHGQQFYCLMNTW+ESLASCSAPQENQYT E LFP P
Sbjct:  253 VWVQCDTCKKWRRLPDFVDPDQLPLKWHCEMNIYDVARANCRAKQESSTATLLEAERKVRQXXXXXXXXXXXXXXXXXXXXXXXESRAKDANLRRFLSGWARRIKCAEKAKSKLAPSMSTRGKRKAPSQAQWVRCQNCGKWRALLRCMDASLFLGHGQQFYCLMNTWNESLASCSAPQENQYTVEALFPPP 443          
BLAST of mRNA_C-linearis_contig74.15024.1 vs. uniprot
Match: A0A7S3GQ09_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GQ09_9STRA)

HSP 1 Score: 137 bits (344), Expect = 1.840e-33
Identity = 74/187 (39.57%), Postives = 100/187 (53.48%), Query Frame = 0
Query:  284 EEPPEDVWVQCDTCKKWRRLPDFVDPDKLPAKWHCEMNSYDLARANCRAKQESTTATRLEXXXXXXXXXXXXXXXXXXXXXXXXESQAKDANLRRFLTAWARRLRCAEKAKTRLAPSMSTRGKRKAPSQAQWVRCQN--CGKWRA---------LLKCMDASVFMGHGQQFYCLMNTWHESLASCSA 459
            + PPE VWVQC+TC KWR LP  VDPDKLP  W C++N YD  R NC A +ES    + E                            +   L+ F+  WA+RL+CA++A+TRL+ +  TRGK K    A+W++C +  CGKWRA         LLK ++   F G    +YC MN+W E+  SC+A
Sbjct:  108 DAPPERVWVQCNTCDKWRSLPSTVDPDKLPDIWTCDLNIYDNTRNNCNAPEESYKLPQEE----------------------------QHEQLKAFVKVWAKRLKCADRAETRLSNAALTRGK-KRKVDAEWIKCSSPACGKWRAIPRTIETATLLKRLNKGRFFGGDGVWYCSMNSWDETTGSCAA 265          
BLAST of mRNA_C-linearis_contig74.15024.1 vs. uniprot
Match: A0A7S2B7X4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B7X4_9STRA)

HSP 1 Score: 132 bits (333), Expect = 5.760e-33
Identity = 71/173 (41.04%), Postives = 92/173 (53.18%), Query Frame = 0
Query:  292 VQCDTCKKWRRLPDFVDPDKLPAKWHCEMNSYDLARANCRAKQESTTATRLEXXXXXXXXXXXXXXXXXXXXXXXXESQAKDANLRRFLTAWARRLRCAEKAKTRLAPSMSTRGKRKAPSQAQWVRC--QNCGKWRALLKCMDASVFMGHGQQFYCLMNTWHESLASCSAPQE 462
            VQCD C KWRRL    D DKLP KW+C MN+ D AR NC A +E  T                               +  D  L+  L  W RRL+C + A+ RL  S STRGK++   + ++++C   NCGKWRAL + +D+         +YC+MNTW E+LASCSAPQE
Sbjct:    1 VQCDKCTKWRRLHGVADADKLPKKWYCTMNN-DPARNNCNAPEEEET------------------------------EKDPDERLKAHLRLWVRRLQCQDTAEVRLPTSSSTRGKKRPLHEQEYIQCCDPNCGKWRALHRSLDSKTLAERAGAWYCVMNTWDEALASCSAPQE 142          
BLAST of mRNA_C-linearis_contig74.15024.1 vs. uniprot
Match: A0A7S2MP46_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MP46_9STRA)

HSP 1 Score: 132 bits (333), Expect = 3.290e-32
Identity = 78/184 (42.39%), Postives = 101/184 (54.89%), Query Frame = 0
Query:  290 VWVQCDTCKKWRRLPDFVDPDKLPAKWHCEMNSYDLARANCRAKQES-TTATRLEXXXXXXXXXXXXXXXXXXXXXXXXESQAKDANLRRFLTAWARRLRCAEKAKTRLAPSMSTRGKRKAPSQA-----QWVRCQN--CGKWRALLKCMDASVFMGHGQ--QFYCLMNTWHESLASCSAPQEN 463
            +WV+CD C+KWRRL   VD  KLP+KW+C MN  D  RA C A +E   TA   E                           A D   R+ L  W RRL+C E  ++RL P+M TRGKR+  +       +WV+C N  CGKWRALL+ MDAS  +   +  ++YC++NTW E  ASC+APQEN
Sbjct:   55 IWVECDKCQKWRRLRGVVDTKKLPSKWYCSMNKNDPERAKCSAPEEEYETANTPE--------------------------SAMDQRTRKHLRLWVRRLQCNETYESRL-PTM-TRGKRRNTASGSKEPYEWVKCCNPSCGKWRALLRFMDASSVIESAKNGEWYCVLNTWDEKAASCAAPQEN 210          
BLAST of mRNA_C-linearis_contig74.15024.1 vs. uniprot
Match: A0A1Z5JR34_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JR34_FISSO)

HSP 1 Score: 132 bits (332), Expect = 1.230e-30
Identity = 74/179 (41.34%), Postives = 92/179 (51.40%), Query Frame = 0
Query:  290 VWVQCDTCKKWRRLPDFVDPDKLPAKWHCEMNSYDLARANCRAKQESTTATRLEXXXXXXXXXXXXXXXXXXXXXXXXESQAKDANLRRFLTAWARRLRCAEKAKTRLAPSMSTRGKRKAPSQA---QWVRC--QNCGKWRALLKCMDASVFMGHGQQFYCLMNTWHESLASCSAPQEN 463
             WV+CD CKKWRRL   VD  KLP+KW+C MN  D  RA C A +E                                   A DA  RR    W RRL+  E  + R    ++TR K++  S     +W+RC  Q CGKWRALLK MDA  + G   ++YC+MNTW E +ASC+APQEN
Sbjct:  224 TWVECDKCKKWRRLRGVVDEKKLPSKWYCSMNKNDPERARCSAPEEEYETPHTP-------------------------ESAADARTRRHFRVWVRRLQTNEAYEAR--QPLATRQKKRTLSSKDAYEWIRCCNQKCGKWRALLKSMDAKQYEG---EWYCVMNTWDEKMASCAAPQEN 372          
BLAST of mRNA_C-linearis_contig74.15024.1 vs. uniprot
Match: A0A7S3DU87_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DU87_9STRA)

HSP 1 Score: 134 bits (338), Expect = 2.070e-30
Identity = 76/189 (40.21%), Postives = 98/189 (51.85%), Query Frame = 0
Query:  290 VWVQCDTCKKWRRLPDFVDPDKLPAKWHCEMNSYDLARANCRAKQESTTATRLEXXXXXXXXXXXXXXXXXXXXXXXXESQAKDANLRRFLTAWARRLRCAEKAKTRLAPSMSTRGKRKAPSQA----QWVRCQN--CGKWRALLKCMDASVFM---------GHGQQFYCLMNTWHESLASCSAPQEN 463
             WV+CD CKKWRRL   VD  KLP KW+C MN  D  RA C A +E     +                             A DA  R+ L  W RRL+C E  ++R  P++ TRGK++A        +WVRC N  CGKWRA+L+CM+A   +            Q++YC+MNTW E +ASC+APQEN
Sbjct:  388 TWVECDKCKKWRRLRGVVDEKKLPPKWYCSMNRNDPERARCSAPEEDYETQQTP-------------------------ESAADAKTRKHLRVWVRRLQCQEAYESR-QPTL-TRGKKRAAGTMKDPYEWVRCCNPSCGKWRAVLRCMEAKTAVLDRKNPHSCAREQEWYCVMNTWDEKMASCAAPQEN 549          
BLAST of mRNA_C-linearis_contig74.15024.1 vs. uniprot
Match: A0A448ZKH0_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZKH0_9STRA)

HSP 1 Score: 135 bits (340), Expect = 3.170e-30
Identity = 77/186 (41.40%), Postives = 105/186 (56.45%), Query Frame = 0
Query:  288 EDVWVQCDTCKKWRRLPDFVDPDKLPAKWHCEMNSYDLARANCRAKQESTTATRLEXXXXXXXXXXXXXXXXXXXXXXXXESQAKDANLRRFLTAWARRLRCAEKAKTRLAPSMSTRGKRKAPSQA-----QWVRCQN--CGKWRALLKCMDAS---VFMGHGQQFYCLMNTWHESLASCSAPQEN 463
            +  WV+CD CKKWRRL   VD +KLP KW+C MN  D  RA C A +E   + R                          ES+A DA  R+ L  W RRL+C E+ ++RL P++ TRGK+++   +     +W+RC N  CGKWRA+L+ MDA    + +    ++YC+MNTW E  ASC+APQEN
Sbjct:  703 QSTWVECDKCKKWRRLRGIVDSNKLPPKWYCTMNKNDPERARCSAPEEEYESPRTP------------------------ESKA-DARTRKHLRVWVRRLQCNEQYESRL-PTL-TRGKKRSAGTSPKEPHEWIRCCNPSCGKWRAILRIMDAKQNVMDLTTDGEWYCVMNTWDEKTASCAAPQEN 861          
BLAST of mRNA_C-linearis_contig74.15024.1 vs. uniprot
Match: A0A7S1ZHQ6_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZHQ6_TRICV)

HSP 1 Score: 132 bits (333), Expect = 4.220e-30
Identity = 76/183 (41.53%), Postives = 98/183 (53.55%), Query Frame = 0
Query:  290 VWVQCDTCKKWRRLPDFVDPDKLPAKWHCEMNSYDLARANCRAKQESTTATRLEXXXXXXXXXXXXXXXXXXXXXXXXESQAKDANLRRFLTAWARRLRCAEKAKTRLAPSMSTRGKRKAPSQA-----QWVRCQN--CGKWRALLKCMDASVFMGHGQ--QFYCLMNTWHESLASCSAPQEN 463
             WV+CD CKKWRRL   VD  KLP+KW+C MN  D  RA C A +E                                   A D   R+ L  W RRL+C E  + RL P+M TRGKR++ + +     +WVRC N  CGKWRALL+ MDA   M + +  ++YC++NTW E  ASC+APQE+
Sbjct:  323 TWVECDKCKKWRRLRGVVDAKKLPSKWYCHMNKNDPERAKCSAPEEEYETPNTP-------------------------ESAADQRTRKHLRLWVRRLQCNEAYEARL-PTM-TRGKRRSATTSAKEPYEWVRCCNPSCGKWRALLRFMDAQTVMENCKNGEWYCVLNTWDEKTASCAAPQES 478          
BLAST of mRNA_C-linearis_contig74.15024.1 vs. uniprot
Match: A0A1E7FWZ7_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FWZ7_9STRA)

HSP 1 Score: 133 bits (334), Expect = 1.100e-29
Identity = 75/184 (40.76%), Postives = 99/184 (53.80%), Query Frame = 0
Query:  290 VWVQCDTCKKWRRLPDFVDPDKLPAKWHCEMNSYDLARANCRAKQESTTATRLEXXXXXXXXXXXXXXXXXXXXXXXXESQAKDANLRRFLTAWARRLRCAEKAKTRLAPSMSTRGKRKAPSQA-----QWVRCQN--CGKWRALLKCMDAS---VFMGHGQQFYCLMNTWHESLASCSAPQEN 463
             WV+CD CKKWRRL   VD  KLP KW+C MN  D  RA C A +E   A                               A DA  R+ L  W RRL+C E+ ++RL P++ TRGK+++ + +     +W+RC N  CGKWRA+L+ MDA    +      ++YC+MNTW E  ASC+APQEN
Sbjct:  479 TWVECDKCKKWRRLRGVVDERKLPPKWYCTMNKNDPERARCSAPEEEYDAAHTP-------------------------ESAADARTRKHLRVWVRRLQCNEQYESRL-PTL-TRGKKRSVASSSKEPHEWIRCCNPSCGKWRAILRIMDAKQNVIDRTSDGEWYCVMNTWDEKTASCAAPQEN 635          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig74.15024.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LD53_ECTSI3.020e-9381.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K0G2_9PHAE4.770e-9282.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3GQ09_9STRA1.840e-3339.57Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7S2B7X4_9STRA5.760e-3341.04Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2MP46_9STRA3.290e-3242.39Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A1Z5JR34_FISSO1.230e-3041.34Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S3DU87_9STRA2.070e-3040.21Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A448ZKH0_9STRA3.170e-3041.40Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S1ZHQ6_TRICV4.220e-3041.53Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A1E7FWZ7_9STRA1.100e-2940.76Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 243..267
NoneNo IPR availableCOILSCoilCoilcoord: 325..345
NoneNo IPR availableCOILSCoilCoilcoord: 185..205
NoneNo IPR availableGENE3D3.30.40.100coord: 281..343
e-value: 4.8E-17
score: 63.3
NoneNo IPR availableGENE3D3.30.40.100coord: 407..464
e-value: 7.1E-13
score: 50.0
NoneNo IPR availablePANTHERPTHR46245FAMILY NOT NAMEDcoord: 288..375
coord: 406..463
NoneNo IPR availablePANTHERPTHR46245:SF2B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR VAL2coord: 406..463
NoneNo IPR availablePANTHERPTHR46245:SF2B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR VAL2coord: 288..375
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..104
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 105..124
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 125..484
IPR011124Zinc finger, CW-typePFAMPF07496zf-CWcoord: 414..462
e-value: 7.0E-12
score: 45.2
coord: 291..335
e-value: 3.5E-14
score: 52.6
IPR011124Zinc finger, CW-typePROSITEPS51050ZF_CWcoord: 409..465
score: 10.786
IPR011124Zinc finger, CW-typePROSITEPS51050ZF_CWcoord: 285..338
score: 14.065

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig74contigC-linearis_contig74:547171..552259 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig74.15024.1mRNA_C-linearis_contig74.15024.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig74 547171..552259 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig74.15024.1 ID=prot_C-linearis_contig74.15024.1|Name=mRNA_C-linearis_contig74.15024.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=484bp
MAPSKKKPKTPKTADTGTAAGAAGAPVSSSQSSSKRGASKPVQQQNADHS
SSSSSSKTHAQAAAAAPVSSRPKRHAEKKRYDDSEDDRPQHLSTRRPKKK
KGGSLLLISLSAANAAALVGNTTASSSDEGSRSEDDIKASPSGGARKGAS
TGGGKQAAGSGPKGSSSSRKGGGSKQAGSTGGSSRRRSDDDEEEEEEEEE
EEEEAAGGQDAASPAPAPAAASITTGASGRQRRSTAGMSWRHHMDEEEEE
EEEEEERRRRRRQENRRRQQDGGRGGRRQKRGYEEPPEDVWVQCDTCKKW
RRLPDFVDPDKLPAKWHCEMNSYDLARANCRAKQESTTATRLEEERKGRQ
KRQQEADDDDEEEESDEESQAKDANLRRFLTAWARRLRCAEKAKTRLAPS
MSTRGKRKAPSQAQWVRCQNCGKWRALLKCMDASVFMGHGQQFYCLMNTW
HESLASCSAPQENQYTAEGLFPSPPPETPDSDSD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011124Znf_CW