prot_C-linearis_contig74.15020.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig74.15020.1
Unique Nameprot_C-linearis_contig74.15020.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length1141
Homology
BLAST of mRNA_C-linearis_contig74.15020.1 vs. uniprot
Match: D8LD58_ECTSI (ATP-dependent RNA and DNA helicase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD58_ECTSI)

HSP 1 Score: 583 bits (1504), Expect = 5.790e-197
Identity = 293/374 (78.34%), Postives = 324/374 (86.63%), Query Frame = 0
Query:  770 SGDAVVAFSRKDIFNIKREIESKTPHKCCVIFGSLPQETRAHQARLFNTEDTGYDVLVASDAIGMGLNLNIRRVVFHAVAKRGAGGGRVAAKLPPTLLKQIGGRAGRHGKQWEFGEVTCLRASDMPYMNQVMNTPLEPLPKAAIFPSVQRMQEFSNCLDQM---GPEDQERRRLAETYAAFARKAKVGDRYFLGTHDQYQTLANTLHPIENLTLKERYAISMAPVNGRNTLLVRAIFLFASAHAAGLPVFINMQLPQKGVLPKSMSEFQTLCSKHNVLDLYRWMGVRFPSIECFAEKSVADIQRLELESIINEALKRKIAVAGPDSISAPEHDTFEKRVIRALNNPNGAAFSVTVSNEAEHAKGDEDDGVEYQL 1140
            SGDAVVAFSRKDIF+IK+EIESKTPHKCCVI+GSLPQETRAHQARLFN+EDTGYDVLVASDA+GMGLNLNIRRVVFHAV+KR  GGGR A KLPPT+LKQIGGRAGRHGKQWE+GE+              MNTPLEP+PKAAIFPSVQ MQEFSNCLD+     PE QERRRLAET+AAFA KAKVGDRYFLGTHDQ+Q LAN LHP+ENLTLKERYAISMAP+NGRNTLLVRAIFLFA+AHAAGLPVFINMQLP KG LPKSM+EFQTLCSKHNVLDLYRWMGVRFPSIECF EKSVA+IQR+ELES+INEALKR+IAV GPDSIS PEHDT+ K+++RALN+P+G      +       + +E +GVEY L
Sbjct:    3 SGDAVVAFSRKDIFSIKKEIESKTPHKCCVIYGSLPQETRAHQARLFNSEDTGYDVLVASDAVGMGLNLNIRRVVFHAVSKR-TGGGRAAVKLPPTMLKQIGGRAGRHGKQWEYGEI--------------MNTPLEPIPKAAIFPSVQHMQEFSNCLDETEADNPEGQERRRLAETFAAFADKAKVGDRYFLGTHDQHQALANALHPVENLTLKERYAISMAPINGRNTLLVRAIFLFATAHAAGLPVFINMQLPPKGTLPKSMTEFQTLCSKHNVLDLYRWMGVRFPSIECFTEKSVAEIQRVELESMINEALKRRIAVTGPDSISVPEHDTYSKKLLRALNSPSGGDVLDAIGQSGAAEEEEEGEGVEYML 361          
BLAST of mRNA_C-linearis_contig74.15020.1 vs. uniprot
Match: D8LD59_ECTSI (RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD59_ECTSI)

HSP 1 Score: 532 bits (1370), Expect = 2.700e-171
Identity = 395/859 (45.98%), Postives = 473/859 (55.06%), Query Frame = 0
Query:    1 MLAAGRTYGQG---LARSTLSVSRCSRLIAPSPGTTSAL--SRAASAYPVSAQVARHSAGGGAPPDDGLLST-------------------KEDQNTPWLKYQRTMYQRTGLQGFGILRRL--GAVSPTAASATDGVPVKHEALSPAPSFFEPASTVSAKAPAASTTTASEGLKADDAGSRANXXXXXXXXXXXQVLQTTEPPPASLTTATPAKKSPPSASTIVPRSPWESSVGGSVGSVEKPE---PIAEMEMERESRKLVEEEAKGEGGAHSGNSSREAALKAELKRKFGKNPGREPEPVLEGRQGQSAPSHWETSSELGTGDENGDGGSGSDSDPSTAATCPDQTKRSLEFPNAGKKTRRRGRRDRGKGSREVDVGVDGAVSE-----GSESESGGDLAAEDRGVPKPESDV----EVGAGNAA------AGDGVGSPA----TPRKRE----RSGTRGSRG-----------------------------------PKISHYLKPGSAWNNVHAKKNLKRLLMGLGSDYGVKEMLAAHHVSDKTLSKLLPMFQDFVLDNPNAAFDGRACQKTQKAISDLCHHDSFAADAVLMRKPTRGKSSSGKTFVFPSTAGKRGRRGRETDFVKKRNDLVEHNFIPSLVHLAQAHFTEEIEVDKQMNAIVDLRNPHQAYPLARLRKRRIIYHGGPTNSGKTYQAIERLKKAGANRQSGGGDGPAGLFCGPLRLLALEVYEQLNSQGVYCNLMTGQEKREVPFATHVSCTIEMASTTNEYEVAVVDEIQMLADEQRGPSWTAAILGLNCPEIHVCGGMEGAVLVEELAKEMGDDFELKEYQRKTELVCAEESLSSSYKNIQSGD 772
            MLAA RTYG G   L+ S ++VSRCSRL A +  TT+    +R  S   V A   +H +GG AP  + L S+                   ++   T W++YQ  M+QRTGL     L  +  G V P+  +      V+  A S            S   P  +T TA        AGS                   T  PPA++ T +       S ST V        +G   G +  P+   PIA    E  SR   E+    +      +S REAAL AEL+RKFG  P     P LE   G                                                   KTRRR  R RG+G R     V+G  +E      S    GG +A      P  ES+     EV  G AA      +GDG   PA    TPR +     R G R  RG                                    + S+  + GSAW NVHAKK L+ LL GL SDYGV+EMLA HH+S  T+SKLL +F+D VLD+P+ AF G A QK Q+ +S LC+H  F ADAVLM++P R +++SG++F F S   K+ +RGRE  FVK+RND+VE   IP LV LAQ  + +EIE  K+M++IVDLRNP Q +PLARLRKRRIIYHGGPTNSGKTYQAIERLKKAGA+RQ G  DGPAGLFCGPLRLLALEVYEQLNSQGVYC+LMTGQEKREVPFATHVSCTIEMAST NEYEVAV+DEIQMLADEQRGPSWT+A+LGLNCPEIHVCGGMEGAVLVE +AKE GDDFEL+EYQRKTELVCAEESL ++YKNIQ G+
Sbjct:    1 MLAARRTYGLGRSTLSTSAVAVSRCSRLGALAHATTARCRSTRIGSTRQVPAARQQHFSGGSAPGANSLSSSPGVGLGRQAGCGRRPTQLARKKGKTEWVRYQNMMHQRTGLARRDQLSSMRGGVVGPSVNNDAGSGGVETSADSXXXXXXXXXXXXSE--PDVATPTA--------AGSSV-----------------TLSPPATMATTS-------SESTAV------IGLGPDDGDLAAPDTVPPIATTRQETSSRISSEDAVITDL-----DSRREAALNAELERKFGTEP-----PQLEEISG---------------------------------------------------KTRRR--RSRGRGRRGAARAVEGTANELQHEPPSAVSGGGGIA------PAAESETGELNEVPVGEAAGPITGMSGDGA-KPASGEGTPRSKSADESRRGRRNRRGGDATGDGRGGGSLXXXXXXXXXXXXXXXXXXXXXXSEDSYSQQQGSAWKNVHAKKKLRWLLKGLASDYGVQEMLARHHISKHTMSKLLRVFEDLVLDHPDTAFPGEAGQKLQEEMSSLCYHPKFQADAVLMKRPIRTRTTSGRSFTFSS---KQPKRGREGPFVKERNDVVEKGLIPRLVELAQESYADEIEATKRMDSIVDLRNPQQGFPLARLRKRRIIYHGGPTNSGKTYQAIERLKKAGADRQPG--DGPAGLFCGPLRLLALEVYEQLNSQGVYCSLMTGQEKREVPFATHVSCTIEMASTVNEYEVAVIDEIQMLADEQRGPSWTSAVLGLNCPEIHVCGGMEGAVLVEAMAKETGDDFELREYQRKTELVCAEESLGNNYKNIQPGE 744          
BLAST of mRNA_C-linearis_contig74.15020.1 vs. uniprot
Match: A0A6H5K988_9PHAE (RNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K988_9PHAE)

HSP 1 Score: 500 bits (1287), Expect = 1.370e-159
Identity = 262/394 (66.50%), Postives = 299/394 (75.89%), Query Frame = 0
Query:  423 GSAWNNVHAKKNLKRLLMGLGSDYGVKEMLAAHHVSD--------------KTLSKLLPMFQDFVLDNPNAAFDGRACQKTQKAISDLCHHDSFAADAVLMRKPTRGKSSSGKTFVFPSTAGKRGRRGRETDFVKKRNDLVEHNFIPSLVHLAQAHFTEEIEVDKQMNAIVDLRNPHQAYPLARLRKRRIIYHGGPTNSGKTYQAIERLKKAGANRQSGGGDGPAGLFCGPLRLLALEVYEQLNSQGVYCNLMTGQEKREVPFATHVSCTIEMASTTNEYEVAVVDEIQMLADEQRGPSWTAAILGLNCPEIHVCGGMEGAVLVEELAKEM------------------------------GDDFELKEYQRKTELVCAEESLSSSYKNIQSGD 772
            GSAW N+HAKK L+ LL GL SDYGV+EMLA HHVS               +T+SKLL +F+D VLD+P+ AF G   QK Q+ +S LC+H  F ADAVLM++P R +++SG++F F S   K+ +RGRE  FVK+RND+VE   IP LV LAQ  + +EIE  K+M+ IVDLRNP Q +PLARLRKRRIIYHGGPTNSGKTYQAIERLKKAGANRQ G  DGPAGLFCGPLRLLALEVYEQLNSQGVYC+LMTGQEKREVPFATHVSCTIEMAST NEYEVAV+DEIQMLADEQRGPSWT+A+LGLNCPEIHVCGGMEGAVLVE +AKE                               GDDFEL+EYQRKTELVCAEESL ++YKNIQ G+
Sbjct:  314 GSAWKNIHAKKKLRWLLKGLASDYGVQEMLALHHVSKASFSTRISCRQVSVQTMSKLLRVFEDLVLDHPDTAFPGEEGQKLQEEVSSLCYHPKFQADAVLMKRPIRTRTTSGRSFTFSS---KQPKRGREGPFVKERNDVVEKGLIPRLVELAQESYADEIEATKRMDNIVDLRNPQQGFPLARLRKRRIIYHGGPTNSGKTYQAIERLKKAGANRQPG--DGPAGLFCGPLRLLALEVYEQLNSQGVYCSLMTGQEKREVPFATHVSCTIEMASTVNEYEVAVIDEIQMLADEQRGPSWTSAVLGLNCPEIHVCGGMEGAVLVEAMAKEAFRVEEIHVEGETRDIVGVWKEEGDRVPAQTGDDFELREYQRKTELVCAEESLGNNYKNIQPGE 702          
BLAST of mRNA_C-linearis_contig74.15020.1 vs. uniprot
Match: A0A7S3UVF2_HETAK (RNA helicase n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVF2_HETAK)

HSP 1 Score: 446 bits (1148), Expect = 4.040e-138
Identity = 244/530 (46.04%), Postives = 335/530 (63.21%), Query Frame = 0
Query:  553 FIPSLVHLAQAHFTEEIEVDKQMNAIVDLRNPHQAYPLARLRKRRIIYHGGPTNSGKTYQAIERLKKAGANRQSGGGDGPAGLFCGPLRLLALEVYEQLNSQGVYCNLMTGQEKREVPFATHVSCTIEMASTTNEYEVAVVDEIQMLADEQRGPSWTAAILGLNCPEIHVCGGMEGAVLVEELAKEMGDDFELKEYQRKTELVCAEESLSSSYKNIQSGDAVVAFSRKDIFNIKREIESKTPHKCCVIFGSLPQETRAHQARLFNTEDTGYDVLVASDAIGMGLNLNIRRVVFHAVAKRGAGGGRVAAKLPPTLLKQIGGRAGRHGKQWEFGEVTCLRASDMPYMNQVMNTPLEPLPKAAIFPSVQRMQEFSNCLDQMGPEDQERRRLAETYAAFARKAKVGDRYFLGTHDQYQTLANTLHPIENLTLKERYAISMAPVNGRNTLLVRAIFLFASAHAAGLPVFINMQLPQKGVLPKSMSEFQTLCSKHNVLDLYRWMGVRFPSIECFAEKSVADIQRLELESIINEALK 1082
            F P + + A  H ++ I+  +++    +   P   YP ARL +R+II+HGGPTNSGKTY+A++RL++A   R  GGG     L+CGPLRLLALEVY++LN  GVYC+L+TGQ+KR VP ATH SCTIE+      ++VAV+DEIQ+LA  +RG +WT A+LGL   E+HVCGG+E A LVE+L  + GD F L  Y R T L     +L S Y  ++ GDA+VAFSR DI++IK EIE+ TPH+CCV++G+LP E RA QA LFN   + +DVLVASDA+G+GLNLNIRRV+FH V K     G   A + PTL+KQIGGRAGR   ++  G VTCL+  DM Y+   M  PL+PL  A +FPSV+++Q F+  +           +L      F   ++VG RYFL  +DQ +  A  L P+  L  ++ +   +AP + R+   +R ++ FA  HA G P  +N+ LP     P+++ E Q LCSKH  LDLY W+   FP    +AE  V + Q+     ++  AL+
Sbjct:  162 FQPFMDYCATKH-SKRIQYQRKLLQASNFLRPPDWYPYARLMRRKIIFHGGPTNSGKTYRALQRLRQADPAR--GGG-----LYCGPLRLLALEVYQELNRDGVYCSLLTGQDKRIVPGATHASCTIELCDVGRAWDVAVIDEIQLLASAERGSAWTRALLGLQAREVHVCGGLEAAPLVEQLCADTGDSFALASYDRFTPLEIEGRALGS-YDKVEPGDAIVAFSRADIYSIKAEIEANTPHRCCVVYGALPSEARAAQAALFNDPASPFDVLVASDAVGLGLNLNIRRVIFHTVYKWNGKAG--VATVEPTLVKQIGGRAGRRSSEYAQGRVTCLQEEDMEYLRWAMGVPLKPLTAAGLFPSVEQVQAFAEAMPPTA-------KLNTLLEKFMELSQVGGRYFLCGYDQLRAAAAYLRPLP-LRPQDLFKYCLAPCSTRDAAQMRNLYTFAQGHALGQPAPLNVLLPTAP--PRTLQEVQELCSKHAALDLYLWLANHFP--RHYAELKVVEAQKAHAIRLLRAALE 668          
BLAST of mRNA_C-linearis_contig74.15020.1 vs. uniprot
Match: G4YHR7_PHYSP (RNA helicase n=5 Tax=Phytophthora TaxID=4783 RepID=G4YHR7_PHYSP)

HSP 1 Score: 431 bits (1108), Expect = 5.270e-134
Identity = 244/551 (44.28%), Postives = 343/551 (62.25%), Query Frame = 0
Query:  537 RETDFVKKRNDLVEHNFIPSLVHLAQAHFTEEIEVDKQ----MNAIVDLRNPHQAYPLARLRKRRIIYHGGPTNSGKTYQAIERLKKAGANRQSGGGDGPAGLFCGPLRLLALEVYEQLNSQGVYCNLMTGQEKREVPFATHVSCTIEMASTTNEYEVAVVDEIQMLADEQRGPSWTAAILGLNCPEIHVCGGMEGAVLVEELAKEMGDDFELKEYQRKTELVCAEESLSSSYKNIQSGDAVVAFSRKDIFNIKREIESKTPHKCCVIFGSLPQETRAHQARLFNTEDTGYDVLVASDAIGMGLNLNIRRVVFHAVAKRGAGGGRVAAKLPPTLLKQIGGRAGRHGKQWEFGEVTCLRASDMPYMNQVMNTPLEPLPKAAIFPSVQRMQEFSNCLDQMGPEDQERRRLAETYAAFARKAKVGDRYFLGTHDQYQTLANTLHPIENLTLKERYAISMAPVNGRNTLLVRAIFLFASAHAAGLPVFINMQLPQKGVLPKSMSEFQTLCSKHNVLDLYRWMGVRFPSIECFAEKSVADIQRLELESIINEALKR 1083
            R+ D VK+ N  +   F P  +  A+A+     + D      +  + DLR PH+ YP A   KRRIIYH GPTNSGKT+QA+ERLK+AG +          G++CGPLRLLALE+YE++NS G+Y +L+TGQEK+ VP++THVSCT+EMA+    ++VAV+DEIQ++ D QRG +WT A+ GL   EIHVCG  E   LV++ A+  GD+FEL+ Y+R++ L  +   L + Y NI+SGD VVAFSR+DIF IKR+IE KT  KCC+I+G LP ETR+ QARLFN  +  +++LVASDA+GMGLNLNIRRVVF  V K   G G +   +P +L KQI GRAGR+G  +  GE TCL   D+ Y+ +  +    PL  A +FPS ++M+EF+  L   G  D     LA+    +   A++   YF+  H   +  A  L   E LTL +R+   M+PV+ RN L  +    +A AH+ G  V +++ LP+    P++      +  K  ++DLY W+  RF   E F EK +A    LEL++ + E +++
Sbjct:   54 RDLDDVKRHNSFI---FYPYFLDYAKANNYLSTDEDNDNALSLQQLTDLRLPHEMYPYATAMKRRIIYHEGPTNSGKTHQALERLKQAGED---------GGIYCGPLRLLALEIYERMNSDGLYTSLVTGQEKKIVPYSTHVSCTVEMANINRPWDVAVIDEIQLIGDPQRGWAWTRALFGLQAKEIHVCGSGEAVHLVKKFAETTGDEFELRSYERRSPLEISTTHLKN-YSNIRSGDCVVAFSRRDIFQIKRDIEIKTGQKCCIIYGQLPPETRSQQARLFNDRNNDFNILVASDAVGMGLNLNIRRVVFATVKKYSGGSGGMV-DIPASLAKQIAGRAGRYGSDFASGEATCLLEEDLEYLKESYDEVPTPLTSAGLFPSSEQMEEFAKQLP--GITD-----LADLVDKYVMLARLDGDYFMCNHQDMKDAATLLRDTE-LTLSDRFTFCMSPVSLRNPLARKVFLEYARAHSLGQSVKLDIYLPKYP--PRTADALGDVEIKAKIIDLYLWLSFRFE--ETFVEKDLA----LELKARVLELVEQ 574          
BLAST of mRNA_C-linearis_contig74.15020.1 vs. uniprot
Match: D0NHU6_PHYIT (RNA helicase n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NHU6_PHYIT)

HSP 1 Score: 436 bits (1121), Expect = 8.080e-134
Identity = 249/553 (45.03%), Postives = 347/553 (62.75%), Query Frame = 0
Query:  536 GRETDFVKKRNDLVEHNFIPSLVHLAQAHFTEEIEVDKQ----MNAIVDLRNPHQAYPLARLRKRRIIYHGGPTNSGKTYQAIERLKKAGANRQSGGGDGPAGLFCGPLRLLALEVYEQLNSQGVYCNLMTGQEKREVPFATHVSCTIEMASTTNEYEVAVVDEIQMLADEQRGPSWTAAILGLNCPEIHVCGGMEGAVLVEELAKEMGDDFELKEYQRKTELVCAEESLSSSYKNIQSGDAVVAFSRKDIFNIKREIESKTPHKCCVIFGSLPQETRAHQARLFNTEDTGYDVLVASDAIGMGLNLNIRRVVFHAVAK-RGAGGGRVAAKLPPTLLKQIGGRAGRHGKQWEFGEVTCLRASDMPYMNQVMNTPLEPLPKAAIFPSVQRMQEFSNCLDQMGPEDQERRRLAETYAAFARKAKVGDRYFLGTHDQYQTLANTLHPIENLTLKERYAISMAPVNGRNTLLVRAIFLFASAHAAGLPVFINMQLPQKGVLPKSMSEFQTLCSKHNVLDLYRWMGVRFPSIECFAEKSVADIQRLELESIINEALKR 1083
            GR+ D VK+ N  +   F P  V  A+A+     + D      +  + DLR PH+ YP A   KR+IIYH GPTNSGKT+QA+ERLK+AG +          G++CGPLRLLALE++E+LN+ G+Y +L+TGQEK+ VP++THVSCT+EMA+    ++VAVVDEIQ++ D QRG +WT A+ GL   EIHVCG  E   LV++ A+  GDDFEL+ Y+R++ L  A   L+S Y +I+SGD VVAFSR+DIF IKR+IE KT  KCC+I+G LP ETR+ QARLFN  +  +++LVASDAIGMGLNLNIRRVVF  V K  G+ GG +   +PP+L KQI GRAGR+G  +  GE TC+   D+ Y+ +  +    PL  A +FPS ++M+EF+  L   G  D     LA+    +   A++   YF+  H   +  A  L   E LTL +R+   M+PV  RN L  R    +A AH+ G  V +++ LP+    P++      +  K  ++DLY W+  RF   + F EK +A    LEL++ + E +++
Sbjct:  200 GRDLDDVKRHNSFI---FYPYFVDYAKANSYLPTDQDNDNVLSLQQLTDLRLPHEMYPFATAMKRKIIYHEGPTNSGKTHQALERLKQAGED---------GGIYCGPLRLLALEIFERLNADGLYTSLVTGQEKKLVPYSTHVSCTVEMANINRPWDVAVVDEIQLIGDPQRGWAWTRALFGLQANEIHVCGSGEAVHLVKKFAETTGDDFELRSYERRSPLEIAPTHLAS-YSHIRSGDCVVAFSRRDIFQIKRDIEVKTGQKCCIIYGQLPPETRSQQARLFNDRNNDFNILVASDAIGMGLNLNIRRVVFATVKKYSGSSGGMI--DIPPSLAKQIAGRAGRYGSDFASGEATCVLEEDLEYLKESYDEVPTPLTSAGLFPSSEQMEEFARQLP--GITD-----LADLVDKYVMLARLDGDYFMCNHQDMKDAATLLRETE-LTLSDRFTFCMSPVGLRNPLARRVFLEYARAHSLGQSVRLDIYLPKYA--PRTAEALGDVEIKAKIIDLYLWLSFRFE--DTFVEKDLA----LELKTRVLELVEQ 721          
BLAST of mRNA_C-linearis_contig74.15020.1 vs. uniprot
Match: A0A3R7GQW8_9STRA (RNA helicase n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GQW8_9STRA)

HSP 1 Score: 431 bits (1107), Expect = 3.330e-133
Identity = 243/549 (44.26%), Postives = 339/549 (61.75%), Query Frame = 0
Query:  536 GRETDFVKKRNDLVEHNFIPSLVHLAQA--HFTEEIEVDKQMNAIVDLRNPHQAYPLARLRKRRIIYHGGPTNSGKTYQAIERLKKAGANRQSGGGDGPAGLFCGPLRLLALEVYEQLNSQGVYCNLMTGQEKREVPFATHVSCTIEMASTTNEYEVAVVDEIQMLADEQRGPSWTAAILGLNCPEIHVCGGMEGAVLVEELAKEMGDDFELKEYQRKTELVCAEESLSSSYKNIQSGDAVVAFSRKDIFNIKREIESKTPHKCCVIFGSLPQETRAHQARLFNTEDTGYDVLVASDAIGMGLNLNIRRVVFHAVAK-RGAGGGRVAAKLPPTLLKQIGGRAGRHGKQWEFGEVTCLRASDMPYMNQVMNTPLEPLPKAAIFPSVQRMQEFSNCLDQMGPEDQERRRLAETYAAFARKAKVGDRYFLGTHDQYQTLANTLHPIENLTLKERYAISMAPVNGRNTLLVRAIFLFASAHAAGLPVFINMQLPQKGVLPKSMSEFQTLCSKHNVLDLYRWMGVRFPSIECFAEKSVADIQRLELESIINEAL 1081
            GR+ D VKK N  +   F P  ++ A+   +     + DK ++ + DLR PH+ YP A   KR+IIYH GPTNSGKT+QA+ERLK+AG +          G++CGPLRLLALE++E+LNS G+Y +L+TGQEK+ VP+++HVSCT+EMA+    ++VAV+DEIQ++ D QRG +WT A+ GL   EIHVCG  E   LV++ A+  GDDFEL+ Y+R++ L      L+S Y +I+ GD VVAFSR+DIF IKR+IE KT  KCC+I+G LP ETR+ QARLFN     Y++LVASDA+GMGLNLNIRRVVF  V K  G+ GG +   +PP+L KQI GRAGR+G  +  G  TCL   D+ Y+ +       PL  A +FPS  +M+EF+  L   G  D     LA+    +   A++   YF+  H   +  A  L   E LTL +R+   MAPV+ RN L  +    +A AH+ G  V +++ LP+    P++      +  K  ++DLY W+  RF   E F E  +A   +  +  ++ + L
Sbjct:   70 GRDLDDVKKHNSFI---FYPFFLNFARTNNYLPTGEDNDKALSQLTDLRLPHEMYPFATAMKRKIIYHEGPTNSGKTHQALERLKQAGED---------GGIYCGPLRLLALEIFERLNSDGLYTSLVTGQEKKIVPYSSHVSCTVEMANINRPWDVAVIDEIQLIGDPQRGWAWTRALFGLQANEIHVCGSGEALPLVQKFAETTGDDFELRSYERRSPLEIDTAHLNS-YSHIRPGDCVVAFSRRDIFQIKRDIEIKTGQKCCIIYGQLPPETRSQQARLFNDRTNDYNILVASDAVGMGLNLNIRRVVFATVKKYSGSSGGMI--DIPPSLAKQIAGRAGRYGSAYASGTATCLLKEDLEYLKESYEEVPTPLTSAGLFPSSDQMEEFAKQLP--GITD-----LADLVDKYVMLARLDGDYFMCNHQDMKDAAKLLRDTE-LTLSDRFTFCMAPVSLRNPLARKVFLEYARAHSLGQSVKLDIYLPKYP--PRTAEALGDVEVKAKIIDLYLWLSFRFG--ETFVENDLALDMKARVLELVEQGL 591          
BLAST of mRNA_C-linearis_contig74.15020.1 vs. uniprot
Match: W2MTU1_PHYPR (RNA helicase n=10 Tax=Phytophthora TaxID=4783 RepID=W2MTU1_PHYPR)

HSP 1 Score: 431 bits (1109), Expect = 9.400e-133
Identity = 244/552 (44.20%), Postives = 347/552 (62.86%), Query Frame = 0
Query:  537 RETDFVKKRNDLVEHNFIPSLVHLAQAHFTEEIEVDKQ----MNAIVDLRNPHQAYPLARLRKRRIIYHGGPTNSGKTYQAIERLKKAGANRQSGGGDGPAGLFCGPLRLLALEVYEQLNSQGVYCNLMTGQEKREVPFATHVSCTIEMASTTNEYEVAVVDEIQMLADEQRGPSWTAAILGLNCPEIHVCGGMEGAVLVEELAKEMGDDFELKEYQRKTELVCAEESLSSSYKNIQSGDAVVAFSRKDIFNIKREIESKTPHKCCVIFGSLPQETRAHQARLFNTEDTGYDVLVASDAIGMGLNLNIRRVVFHAVAK-RGAGGGRVAAKLPPTLLKQIGGRAGRHGKQWEFGEVTCLRASDMPYMNQVMNTPLEPLPKAAIFPSVQRMQEFSNCLDQMGPEDQERRRLAETYAAFARKAKVGDRYFLGTHDQYQTLANTLHPIENLTLKERYAISMAPVNGRNTLLVRAIFLFASAHAAGLPVFINMQLPQKGVLPKSMSEFQTLCSKHNVLDLYRWMGVRFPSIECFAEKSVADIQRLELESIINEALKR 1083
            R+ D VK+ N  +   F P  V  A+++     + D      +  + DLR PH+ YP A   KR+IIYH GPTNSGKT+QA+ERLK+AG +          G++CGPLRLLALE++E++N+ G+Y +L+TGQEK+ VP++THVSCT+EMA+    ++VAV+DEIQ++ D QRG +WT A+ GL   EIHVCG  E   LV++ A+  GDDFEL+ Y+R++ L  A + L S Y +I+SGD VVAFSR+DIF IKR+IE KT  KCC+I+G LP ETR+ QARLFN  +  +++LVASDA+GMGLNLNIRRVVF  V K  G+ GG +   +PP+L KQI GRAGR+G  +  GE TCL   D+ Y+ +  +    PL  A +FPS ++M+EF+  L   G  D     LA+    +   A++   YF+  H   +  A  L   E LTL +R+   M+PV+ RN L  +    +A AH+ G  V +++ LP+    P++      +  K  ++DLY W+  RF   + F EK +A    LEL++ + E +++
Sbjct:  139 RDLDDVKRHNSFI---FYPYFVDYAKSNSYLPTDQDNDNVLSLQQLTDLRLPHEMYPYATAMKRKIIYHEGPTNSGKTHQALERLKQAGED---------GGIYCGPLRLLALEIFERMNADGLYTSLVTGQEKKLVPYSTHVSCTVEMANINRPWDVAVIDEIQLIGDPQRGWAWTRALFGLQAKEIHVCGSGEAVHLVKKFAETTGDDFELRSYERRSPLEIAPKHLGS-YSHIRSGDCVVAFSRRDIFQIKRDIEIKTGQKCCIIYGQLPPETRSQQARLFNDRNNDFNILVASDAVGMGLNLNIRRVVFATVKKYSGSSGGMI--DIPPSLAKQIAGRAGRYGSDFASGEATCLLEEDLGYLKESYDEVPTPLTSAGLFPSSEQMEEFAKQLP--GITD-----LADLVDKYVMLARLDGDYFMCNHQDMKDAATLLRDTE-LTLSDRFTFCMSPVSLRNPLARKVFLEYARAHSLGQSVKLDIYLPKYA--PRTAEALGDVEIKAKIIDLYLWLSFRFE--DTFVEKDLA----LELKTKVLELVEQ 659          
BLAST of mRNA_C-linearis_contig74.15020.1 vs. uniprot
Match: A0A662XKE7_9STRA (RNA helicase n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XKE7_9STRA)

HSP 1 Score: 430 bits (1105), Expect = 2.230e-132
Identity = 242/556 (43.53%), Postives = 337/556 (60.61%), Query Frame = 0
Query:  536 GRETDFVKKRNDLV----------EHNFIPSLVHLAQAHFTEEIEVDKQMNAIVDLRNPHQAYPLARLRKRRIIYHGGPTNSGKTYQAIERLKKAGANRQSGGGDGPAGLFCGPLRLLALEVYEQLNSQGVYCNLMTGQEKREVPFATHVSCTIEMASTTNEYEVAVVDEIQMLADEQRGPSWTAAILGLNCPEIHVCGGMEGAVLVEELAKEMGDDFELKEYQRKTELVCAEESLSSSYKNIQSGDAVVAFSRKDIFNIKREIESKTPHKCCVIFGSLPQETRAHQARLFNTEDTGYDVLVASDAIGMGLNLNIRRVVFHAVAKRGAGGGRVAAKLPPTLLKQIGGRAGRHGKQWEFGEVTCLRASDMPYMNQVMNTPLEPLPKAAIFPSVQRMQEFSNCLDQMGPEDQERRRLAETYAAFARKAKVGDRYFLGTHDQYQTLANTLHPIENLTLKERYAISMAPVNGRNTLLVRAIFLFASAHAAGLPVFINMQLPQKGVLPKSMSEFQTLCSKHNVLDLYRWMGVRFPSIECFAEKSVADIQRLELESIINEAL 1081
            GR+ D VKKRN  +          EHN++P           E+ E    +  + DLR  H+ YP A   KR+IIYH GPTNSGKT+QA+ERLK+AG +          G++CGPLRLLALE++E++N+ G Y +L+TGQEK+ VP+ATHVSCT+EMA+    ++VAV+DEIQ++ D QRG +WT A+ GL   EIHVCG  E   LV++ A+  GD+FEL+ Y+R++ L    + L S Y++++ GD VVAFSR+DIF IKR+IE KT  KCC+I+G LP ETR+ QARLFN  D  Y++LVASDA+GMGLNLNI RV+F  V K   GGG +A  +PP L KQI GRAGR+G  +  G  TCL   D+ Y+ +      +PL  A +FPS  +M+EF+  L   G  D     L +    +   A++   YF+  H   +  A  L   E LTL +R+   MAP   RN L  +    +A AH+ G  V +++ LP+    P++      +  K  ++DLY W+  RF   E F EK VA   ++++  ++ + L
Sbjct:   95 GRDLDDVKKRNSFIFYPFFLVFAKEHNYLPK---------DEDSEHAFSLQQLTDLRLSHEMYPYATAMKRKIIYHVGPTNSGKTHQALERLKQAGED---------GGIYCGPLRLLALEIFERMNTDGHYTSLVTGQEKKIVPYATHVSCTVEMANINRPWDVAVIDEIQLIGDPQRGWAWTRALFGLQAKEIHVCGSGEAVHLVQKFAETTGDEFELRSYERRSPLEIDTKHLES-YRHVKPGDCVVAFSRRDIFQIKRDIEVKTGLKCCIIYGQLPPETRSQQARLFNARDNEYNILVASDAVGMGLNLNIGRVIFATVKKYSGGGGDMA-DIPPALAKQIAGRAGRYGSAFSSGTATCLLPEDLEYLKESYEEEPKPLTSAGLFPSSDQMEEFAKQLP--GITD-----LGDLVDKYVMLARLDGDYFMCNHQDMKDAAALLRDTE-LTLSDRFTFCMAPAGLRNPLARKVFLDYARAHSTGQSVKLDIYLPK--FAPQTAESLLDVEIKAKIIDLYLWLSFRFE--ETFVEKDVALELKVKVLELVEQGL 618          
BLAST of mRNA_C-linearis_contig74.15020.1 vs. uniprot
Match: A0A0P1AZN5_PLAHL (RNA helicase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AZN5_PLAHL)

HSP 1 Score: 426 bits (1094), Expect = 8.860e-132
Identity = 243/553 (43.94%), Postives = 335/553 (60.58%), Query Frame = 0
Query:  536 GRETDFVKKRNDLVEHNFIPSLVHLAQAHFTEEIEVDKQMNAI-----VDLRNPHQAYPLARLRKRRIIYHGGPTNSGKTYQAIERLKKAGANRQSGGGDGPAGLFCGPLRLLALEVYEQLNSQGVYCNLMTGQEKREVPFATHVSCTIEMASTTNEYEVAVVDEIQMLADEQRGPSWTAAILGLNCPEIHVCGGMEGAVLVEELAKEMGDDFELKEYQRKTELVCAEESLSSSYKNIQSGDAVVAFSRKDIFNIKREIESKTPHKCCVIFGSLPQETRAHQARLFNTEDTGYDVLVASDAIGMGLNLNIRRVVFHAVAKRGAGGGRVAAKLPPTLLKQIGGRAGRHGKQWEFGEVTCLRASDMPYMNQVMNTPLEPLPKAAIFPSVQRMQEFSNCLDQMGPEDQERRRLAETYAAFARKAKVGDRYFLGTHDQYQTLANTLHPIENLTLKERYAISMAPVNGRNTLLVRAIFLFASAHAAGLPVFINMQLPQKGVLPKSMSEFQTLCSKHNVLDLYRWMGVRFPSIECFAEKSVADIQRLELESIINEALKR 1083
            G+  D VK+ N  +   F P  +  A+A  T  +  D+  + I      DLR PH+ YP A   KR+IIYH GPTNSGKT+QA+ERLK+AG +          G++CGPLRLLALE++++LN+ G+Y +L+TGQEK+ VP++THVSCT+EMA+    ++VAV+DEIQ++ D QRG +WT A  GL   EIHVCG  E   L+++ A   GDDFEL  Y R++ L  A + L S Y +IQ GD VVAFSR+DIF IKR+IE KT  KCC+I+G LP ETR+HQARLFN     ++VLVASDAIGMGLNLNIRR+VF  V K    GG +   +PP L +QI GRAGR+   +  GE TCL   D+ YM +       PL  A IFP+ ++M+EF+  L  +         LA+    +   A++   YF+  H   +  A  L   + LTL +R+   M+PV+ RN L  +    +A AH+ G  V +++ LP+    P S      +  K  ++DLY W+  RF +   F EK +A    LEL+  + E +++
Sbjct:   53 GQTLDNVKRHNSFI---FYPYFLDYAKA--TSYLPADQDTDTISLQQLTDLRLPHEMYPFATAMKRKIIYHEGPTNSGKTFQALERLKQAGED---------GGIYCGPLRLLALEIFDRLNTDGLYTSLVTGQEKKVVPYSTHVSCTVEMANINRRWDVAVLDEIQLIGDPQRGWAWTRAFFGLQANEIHVCGSGEAVDLIKKFAATTGDDFELCSYSRRSPLTLATKHLGS-YHHIQPGDCVVAFSRRDIFQIKRDIEIKTGLKCCIIYGQLPPETRSHQARLFNDRTNDFNVLVASDAIGMGLNLNIRRIVFATVKKYSGSGGMI--DIPPALARQIAGRAGRYNSDFASGEATCLLKEDLEYMKESYEEKPTPLSSAGIFPTSEQMEEFAKQLPGIS-------NLADLVDKYVMLARLDGAYFMCNHQDMKDAATLLQETD-LTLSDRFTFCMSPVSLRNPLARKVFLEYARAHSLGQSVKLDIYLPK--FAPHSAEALGDVEIKAKIIDLYLWLSFRFENT--FVEKKLA----LELKKRVLELVEQ 572          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig74.15020.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LD58_ECTSI5.790e-19778.34ATP-dependent RNA and DNA helicase, putative n=1 T... [more]
D8LD59_ECTSI2.700e-17145.98RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A6H5K988_9PHAE1.370e-15966.50RNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A7S3UVF2_HETAK4.040e-13846.04RNA helicase n=2 Tax=Heterosigma akashiwo TaxID=28... [more]
G4YHR7_PHYSP5.270e-13444.28RNA helicase n=5 Tax=Phytophthora TaxID=4783 RepID... [more]
D0NHU6_PHYIT8.080e-13445.03RNA helicase n=2 Tax=Phytophthora infestans TaxID=... [more]
A0A3R7GQW8_9STRA3.330e-13344.26RNA helicase n=4 Tax=Phytophthora kernoviae TaxID=... [more]
W2MTU1_PHYPR9.400e-13344.20RNA helicase n=10 Tax=Phytophthora TaxID=4783 RepI... [more]
A0A662XKE7_9STRA2.230e-13243.53RNA helicase n=2 Tax=Nothophytophthora sp. Chile5 ... [more]
A0A0P1AZN5_PLAHL8.860e-13243.94RNA helicase n=1 Tax=Plasmopara halstedii TaxID=47... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 783..878
e-value: 3.4E-13
score: 59.8
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 769..878
e-value: 9.2E-10
score: 38.9
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 760..921
score: 10.449
IPR022192Mitochondrial degradasome RNA helicase subunit, C-terminal domainPFAMPF12513SUV3_Ccoord: 1035..1083
e-value: 2.4E-11
score: 43.4
NoneNo IPR availableGENE3D3.40.50.300coord: 750..905
e-value: 2.1E-139
score: 466.7
NoneNo IPR availableGENE3D1.20.272.40coord: 578..986
e-value: 2.1E-139
score: 466.7
NoneNo IPR availableGENE3D1.20.58.1080coord: 989..1092
e-value: 6.6E-12
score: 47.3
NoneNo IPR availableGENE3D3.40.50.300coord: 584..749
e-value: 2.1E-139
score: 466.7
NoneNo IPR availablePANTHERPTHR12131:SF1ATP-DEPENDENT RNA HELICASE SUPV3L1, MITOCHONDRIALcoord: 550..1083
NoneNo IPR availablePANTHERPTHR12131ATP-DEPENDENT RNA AND DNA HELICASEcoord: 550..1083
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1018..1140
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..996
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 997..1017
IPR041082Suv3, C-terminal domain 1PFAMPF18147Suv3_C_1coord: 968..1010
e-value: 7.5E-11
score: 41.7
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 590..715
score: 9.239
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 593..880

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig74contigC-linearis_contig74:510169..522843 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig74.15020.1mRNA_C-linearis_contig74.15020.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig74 510028..525171 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig74.15020.1 ID=prot_C-linearis_contig74.15020.1|Name=mRNA_C-linearis_contig74.15020.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1141bp
MLAAGRTYGQGLARSTLSVSRCSRLIAPSPGTTSALSRAASAYPVSAQVA
RHSAGGGAPPDDGLLSTKEDQNTPWLKYQRTMYQRTGLQGFGILRRLGAV
SPTAASATDGVPVKHEALSPAPSFFEPASTVSAKAPAASTTTASEGLKAD
DAGSRANSSGSSAAATGDQVLQTTEPPPASLTTATPAKKSPPSASTIVPR
SPWESSVGGSVGSVEKPEPIAEMEMERESRKLVEEEAKGEGGAHSGNSSR
EAALKAELKRKFGKNPGREPEPVLEGRQGQSAPSHWETSSELGTGDENGD
GGSGSDSDPSTAATCPDQTKRSLEFPNAGKKTRRRGRRDRGKGSREVDVG
VDGAVSEGSESESGGDLAAEDRGVPKPESDVEVGAGNAAAGDGVGSPATP
RKRERSGTRGSRGPKISHYLKPGSAWNNVHAKKNLKRLLMGLGSDYGVKE
MLAAHHVSDKTLSKLLPMFQDFVLDNPNAAFDGRACQKTQKAISDLCHHD
SFAADAVLMRKPTRGKSSSGKTFVFPSTAGKRGRRGRETDFVKKRNDLVE
HNFIPSLVHLAQAHFTEEIEVDKQMNAIVDLRNPHQAYPLARLRKRRIIY
HGGPTNSGKTYQAIERLKKAGANRQSGGGDGPAGLFCGPLRLLALEVYEQ
LNSQGVYCNLMTGQEKREVPFATHVSCTIEMASTTNEYEVAVVDEIQMLA
DEQRGPSWTAAILGLNCPEIHVCGGMEGAVLVEELAKEMGDDFELKEYQR
KTELVCAEESLSSSYKNIQSGDAVVAFSRKDIFNIKREIESKTPHKCCVI
FGSLPQETRAHQARLFNTEDTGYDVLVASDAIGMGLNLNIRRVVFHAVAK
RGAGGGRVAAKLPPTLLKQIGGRAGRHGKQWEFGEVTCLRASDMPYMNQV
MNTPLEPLPKAAIFPSVQRMQEFSNCLDQMGPEDQERRRLAETYAAFARK
AKVGDRYFLGTHDQYQTLANTLHPIENLTLKERYAISMAPVNGRNTLLVR
AIFLFASAHAAGLPVFINMQLPQKGVLPKSMSEFQTLCSKHNVLDLYRWM
GVRFPSIECFAEKSVADIQRLELESIINEALKRKIAVAGPDSISAPEHDT
FEKRVIRALNNPNGAAFSVTVSNEAEHAKGDEDDGVEYQL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR022192SUV3_C
IPR041082Suv3_C_1
IPR014001Helicase_ATP-bd
IPR027417P-loop_NTPase