prot_C-linearis_contig74.15011.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig74.15011.1
Unique Nameprot_C-linearis_contig74.15011.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length100
Homology
BLAST of mRNA_C-linearis_contig74.15011.1 vs. uniprot
Match: A0A6H5JLK4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLK4_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 1.830e-31
Identity = 60/99 (60.61%), Postives = 71/99 (71.72%), Query Frame = 0
Query:    2 LGSDPASYCLKLSDMLTYISRHSLPSTAPSGLERLSEEPPRRFTVSQSRCTCGGELCSDVDMDGKLVTEAPLVVNVQVERRKCGTCGAWAWASDNWRQT 100
            L SD  S+C KL+DMLTY+ R +LP TAPSGL R+S  P RR  VSQ++CTCGGEL  + D++  LVTE        VERRKCGTCGA AWASDN R+T
Sbjct:  109 LDSDAESFCSKLADMLTYMRRLALPPTAPSGLARISVTPARRLVVSQTKCTCGGELLPEADVNATLVTE--------VERRKCGTCGACAWASDNLRKT 199          
BLAST of mRNA_C-linearis_contig74.15011.1 vs. uniprot
Match: A0A6H5KPP3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPP3_9PHAE)

HSP 1 Score: 123 bits (309), Expect = 1.160e-30
Identity = 62/99 (62.63%), Postives = 70/99 (70.71%), Query Frame = 0
Query:    2 LGSDPASYCLKLSDMLTYISRHSLPSTAPSGLERLSEEPPRRFTVSQSRCTCGGELCSDVDMDGKLVTEAPLVVNVQVERRKCGTCGAWAWASDNWRQT 100
            L SD  SYC KL+DMLTY+ R +LP TAPSGL RLSE P RR  VSQ++CTCGGEL  + D+   LV E        VERRKCG CGA AWASDNWR+T
Sbjct:  327 LDSDAESYCSKLADMLTYMRRLALPPTAPSGLARLSETPARRLMVSQTKCTCGGELLPEADVIATLVME--------VERRKCGACGACAWASDNWRKT 417          
BLAST of mRNA_C-linearis_contig74.15011.1 vs. uniprot
Match: D7G2H3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2H3_ECTSI)

HSP 1 Score: 92.0 bits (227), Expect = 1.040e-20
Identity = 44/69 (63.77%), Postives = 52/69 (75.36%), Query Frame = 0
Query:    2 LGSDPASYCLKLSDMLTYISRHSLPSTAPSGLERLSEEPPRRFTVSQSRCTCGGELCSDVDMDGKLVTE 70
            L SD  SYC KL+DMLTY+ R +LP TAPSGL RLSE P RR  VSQ++CTCGGEL  + D++  LVTE
Sbjct:  171 LDSDAESYCSKLADMLTYMRRLALPPTAPSGLARLSETPARRLVVSQTKCTCGGELLPEADVNATLVTE 239          
BLAST of mRNA_C-linearis_contig74.15011.1 vs. uniprot
Match: D7FR86_ECTSI (Autophagy protein 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR86_ECTSI)

HSP 1 Score: 92.0 bits (227), Expect = 1.190e-19
Identity = 44/69 (63.77%), Postives = 52/69 (75.36%), Query Frame = 0
Query:    2 LGSDPASYCLKLSDMLTYISRHSLPSTAPSGLERLSEEPPRRFTVSQSRCTCGGELCSDVDMDGKLVTE 70
            L SD  SYC KL+DMLTY+ R +LP TAPSGL RLSE P RR  VSQ++CTCGGEL  + D++  LVTE
Sbjct:   66 LDSDAESYCSKLADMLTYMRRLALPPTAPSGLARLSETPARRLVVSQTKCTCGGELLPEADVNATLVTE 134          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig74.15011.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JLK4_9PHAE1.830e-3160.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KPP3_9PHAE1.160e-3062.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2H3_ECTSI1.040e-2063.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FR86_ECTSI1.190e-1963.77Autophagy protein 5 n=1 Tax=Ectocarpus siliculosus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig74contigC-linearis_contig74:421003..421600 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig74.15011.1mRNA_C-linearis_contig74.15011.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig74 421003..421602 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig74.15011.1 ID=prot_C-linearis_contig74.15011.1|Name=mRNA_C-linearis_contig74.15011.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=100bp
LLGSDPASYCLKLSDMLTYISRHSLPSTAPSGLERLSEEPPRRFTVSQSR
CTCGGELCSDVDMDGKLVTEAPLVVNVQVERRKCGTCGAWAWASDNWRQT
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