prot_C-linearis_contig73.14957.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig73.14957.1
Unique Nameprot_C-linearis_contig73.14957.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length214
Homology
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BLAST of mRNA_C-linearis_contig73.14957.1 vs. uniprot
Match: D8LJ26_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ26_ECTSI)

HSP 1 Score: 136 bits (343), Expect = 4.310e-37
Identity = 90/109 (82.57%), Postives = 93/109 (85.32%), Query Frame = 0 
Query:    1 MLDERRRRLNGGSDTSSDASSTTGEDLDVQFIRVEKELKLKTKELELKRVEDELRLHKSGAWFVAGPAAGAVPATGSSTXXXXXXXXXXXXXXXAAGAAVSSVPKSDAP 109
            MLDERR RL+GGSDTSSDASSTT EDLDVQFIRVEKELKLKTKELE+ RVEDELRL KSGAWFV GPAAGAVPA     XXXXXXXXXXXX    A AA+SSVPKS AP
Sbjct:    1 MLDERRLRLSGGSDTSSDASSTTDEDLDVQFIRVEKELKLKTKELEMARVEDELRLRKSGAWFVTGPAAGAVPAXXXXXXXXXXXXXXXXXTNIPARAAISSVPKSAAP 109
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BLAST of mRNA_C-linearis_contig73.14957.1 vs. uniprot
Match: A0A6H5K2A3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2A3_9PHAE)

HSP 1 Score: 125 bits (315), Expect = 1.130e-29
Identity = 74/105 (70.48%), Postives = 77/105 (73.33%), Query Frame = 0 
Query:    1 MLDERRRRLNGGSDTSSDASSTTGEDLDVQFIRVEKELKLKTKELELKRVEDELRLHKSGAWFVAGPAAGAVPATGSSTXXXXXXXXXXXXXXXAAGAAVSSVPK 105
            MLDERR RL+GGSDT SD SSTT EDLDV FIRVEKELKL+TKELEL RVEDELRL KS AWFVAGPA GAVPATGS                 A+GAAVS  PK
Sbjct:  890 MLDERRGRLSGGSDTPSDISSTTDEDLDVHFIRVEKELKLRTKELELARVEDELRLRKSDAWFVAGPAVGAVPATGS------------YGAAPASGAAVSKQPK 982
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BLAST of mRNA_C-linearis_contig73.14957.1 vs. uniprot
Match: D8LKS3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKS3_ECTSI)

HSP 1 Score: 70.9 bits (172), Expect = 5.480e-13
Identity = 38/44 (86.36%), Postives = 40/44 (90.91%), Query Frame = 0 
Query:    2 LDERRRRLNGGSDTSSDASSTTGEDLDVQFIRVEKELKLKTKEL 45
            LDERRRRL GGSD  SDASSTT +DLDVQFIRVEKEL+LKTKEL
Sbjct:   15 LDERRRRLRGGSDNPSDASSTTDQDLDVQFIRVEKELELKTKEL 58
[Close]
BLAST of mRNA_C-linearis_contig73.14957.1 vs. uniprot
Match: D8LBS5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBS5_ECTSI)

HSP 1 Score: 49.7 bits (117), Expect = 8.860e-5
Identity = 22/31 (70.97%), Postives = 24/31 (77.42%), Query Frame = 0 
Query:  110 TRDWLYRWCCTRFWRCCLEKAQARP-GPVQE 139
            T DWL RW CTRFWR CLEKAQAR  GP ++
Sbjct:   22 TGDWLCRWYCTRFWRGCLEKAQARGWGPYKK 52
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig73.14957.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LJ26_ECTSI4.310e-3782.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K2A3_9PHAE1.130e-2970.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LKS3_ECTSI5.480e-1386.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LBS5_ECTSI8.860e-570.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 33..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig73contigC-linearis_contig73:495343..496102 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig73.14957.1mRNA_C-linearis_contig73.14957.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig73 495343..496102 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig73.14957.1 ID=prot_C-linearis_contig73.14957.1|Name=mRNA_C-linearis_contig73.14957.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=214bp
MLDERRRRLNGGSDTSSDASSTTGEDLDVQFIRVEKELKLKTKELELKRV
EDELRLHKSGAWFVAGPAAGAVPATGSSTVAAPMTGTAACATTVAAGAAV
SSVPKSDAPTRDWLYRWCCTRFWRCCLEKAQARPGPVQEDASDNRRGRTR
RGEGDGEGDWRSLPAGQGQDRGQRQERRCSSHGFAQQPSFEVLSGSVLGK
ERRRIRPRGMVRQ*
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