prot_C-linearis_contig73.14950.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig73.14950.1
Unique Nameprot_C-linearis_contig73.14950.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length221
Homology
BLAST of mRNA_C-linearis_contig73.14950.1 vs. uniprot
Match: A0A6H5J6M3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6M3_9PHAE)

HSP 1 Score: 257 bits (656), Expect = 4.540e-83
Identity = 138/216 (63.89%), Postives = 153/216 (70.83%), Query Frame = 0
Query:    7 ERSWGVHLVETAPAKLDSWRVIGDEADIAAYAAVHAPS-PATTXXXXXXXXXXXXGGDWSAMYFQLSPENAAGTLGYRWDRGYNVARLVRVSLPLAACGAVAMVLDDTGRGAEVGGGEEIGVHGKRRVLMAASDVPGAFKSALLKSRLGIPQDESLLPALGRRTPNPAVLVCRESAGEWEVAVPHQLLAVMSGNATWVEQRVTEFRPRAGVTAEMR 221
            E  W VH+VE  PA L  WRVIGDE+ +AAYAA  APS PATT              DWSAMYFQLSP NA GTLGYRWD+GY VARLVR+SLPL ACGAVA+V+DDTG   E G  E      K   LM +SD+PGAFK+A+LKSRLG+P DE LLPALGRR P P VLVCRES GEWEVAVPH LL VM+    W E+RV EFRP  G+TAE R
Sbjct:    9 ENPWDVHMVEATPATLHVWRVIGDESGVAAYAAARAPSVPATTES------------DWSAMYFQLSPGNAVGTLGYRWDQGYPVARLVRISLPLGACGAVALVVDDTGEKVEAGA-EFAKRENKLPGLMVSSDIPGAFKAAVLKSRLGVPSDEPLLPALGRRQP-PVVLVCRESVGEWEVAVPHNLLGVMARGNAWEERRVAEFRPHTGITAEAR 210          
BLAST of mRNA_C-linearis_contig73.14950.1 vs. uniprot
Match: D7FX34_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX34_ECTSI)

HSP 1 Score: 205 bits (521), Expect = 2.120e-63
Identity = 107/155 (69.03%), Postives = 121/155 (78.06%), Query Frame = 0
Query:   67 MYFQLSPENAAGTLGYRWDRGYNVARLVRVSLPLAACGAVAMVLDDTGRGAEVGGGEEIGVHGKRRVLMAASDVPGAFKSALLKSRLGIPQDESLLPALGRRTPNPAVLVCRESAGEWEVAVPHQLLAVMSGNATWVEQRVTEFRPRAGVTAEMR 221
            MYFQLSP NA GTLGYRWD+GY VARLVR+SLPLAACGAVA+V+DDTG   E G  E      K   LM +SD+PGAFK+A+LKSRLG+  D+ LLPALG+R P PAVLVCRES GEWEVAVPH LL VM+    W E+RV EFRPRAG+TAE R
Sbjct:    1 MYFQLSPGNAVGTLGYRWDQGYPVARLVRISLPLAACGAVALVVDDTGEKVEAGA-ETAKREQKLPGLMVSSDIPGAFKAAVLKSRLGVLPDDPLLPALGQRQP-PAVLVCRESVGEWEVAVPHNLLGVMARGNAWEERRVAEFRPRAGITAEAR 153          
BLAST of mRNA_C-linearis_contig73.14950.1 vs. uniprot
Match: A0A0G4I9W5_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I9W5_9ALVE)

HSP 1 Score: 88.2 bits (217), Expect = 2.970e-17
Identity = 74/226 (32.74%), Postives = 109/226 (48.23%), Query Frame = 0
Query:    7 ERSWGVHLVETA-PAKLDSWRVIGDEADIAAY-AAVHAPSPATTXXXXXXXXXXXXGGDWSAMYFQLSPENAAGTLGYRWDRGYNVARLVRVSLP----LAACGAVAMVLDDTGRGAEVGGGEEIGVHGKRRVL-----MAASDVPGAFKSALLKSRLGIPQDESLLPALGRRTPNPAVLVCRESAGEWEVAVPHQLLAVMSGNATWVEQRVTEFRPRAGVTAEMR 221
            E S G+ +V    PA L  ++++G +  +  Y AAVH     +               DWSA+Y Q    +A GTL YRWD+G+++A L +++L       A GA A      G G   GG  E  V G + V+     MA   V G  K+ +LK  L +  +  L+  LG R     VL C+E+ G+WE+AVPH  ++    N   V++R  EF  + G+T   R
Sbjct:    9 EPSAGLEVVTVRLPASLSVFKIVGGKETVEEYLAAVHKARGGSETAKEP---------DWSALYLQFDEAHALGTLPYRWDQGFSLASLWKLTLKGKEESPAPGAAASA---GGEGKGTGGQVESTV-GLQAVIVKGGWMAGGSVAGEEKADILKKSLELNVELPLMAQLGSRG---MVLCCKETGGQWEMAVPHSCVSRFMSNT--VQRREKEFEEKCGMTRRWR 216          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig73.14950.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5J6M3_9PHAE4.540e-8363.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FX34_ECTSI2.120e-6369.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A0G4I9W5_9ALVE2.970e-1732.74Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig73contigC-linearis_contig73:298341..299003 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig73.14950.1mRNA_C-linearis_contig73.14950.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig73 298341..299307 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig73.14950.1 ID=prot_C-linearis_contig73.14950.1|Name=mRNA_C-linearis_contig73.14950.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=221bp
MEEDEEERSWGVHLVETAPAKLDSWRVIGDEADIAAYAAVHAPSPATTAA
AAAAAAAAAAGGDWSAMYFQLSPENAAGTLGYRWDRGYNVARLVRVSLPL
AACGAVAMVLDDTGRGAEVGGGEEIGVHGKRRVLMAASDVPGAFKSALLK
SRLGIPQDESLLPALGRRTPNPAVLVCRESAGEWEVAVPHQLLAVMSGNA
TWVEQRVTEFRPRAGVTAEMR
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