prot_C-linearis_contig73.14939.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig73.14939.1
Unique Nameprot_C-linearis_contig73.14939.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length283
Homology
BLAST of mRNA_C-linearis_contig73.14939.1 vs. uniprot
Match: A0A6H5J9S6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9S6_9PHAE)

HSP 1 Score: 359 bits (922), Expect = 4.230e-122
Identity = 174/255 (68.24%), Postives = 207/255 (81.18%), Query Frame = 0
Query:   13 ILRHPRFSAVVWWNFLLMSFIMVIHNLVFQSWGIGTFDSITRLVERRGEQGFFDSTPLYDAEGKPSFLQYARSPAGRFMHILPAGLWSVIAPLQLSPTFRARHRTAHRRLGRLFIFMSASIAFGLVPLILSGATKEVRKSAVVDGIPLAIMV-YFLAVGLLAVHHARNKRFAEHRVWMLRHVAMGYSVHMQRLLGYLTWWALPLVLPSTYTELSHEGSQLRSDVFSYYFIAGALVTVGSMEVWLRHTSPTGQVLR 266
            +L H RFS  +W   +L+SFIMV+HNLV Q+WGIGTF SITR +E +GEQGF+ STPL+DAEGKPSFL YAR+PAGRFMHILPAGLWSVIAPLQL+P+FRA+HR AHRRLGRLFIFMS SI+ GLVPL+L  A           G    +   YFL  GLLAVHHARNKRFA+HRVWMLRHVAMGYSVHMQRLLG+LTWW  PL++P  YT+L+++G +LR+ VF+ YF+AG ++TVG MEVWLRHT P+G+VLR
Sbjct:   28 VLEHRRFSTAMWSMLMLLSFIMVVHNLVLQTWGIGTFPSITRRIEAQGEQGFYRSTPLFDAEGKPSFLAYARTPAGRFMHILPAGLWSVIAPLQLNPSFRAKHRAAHRRLGRLFIFMSVSISLGLVPLVLGVAPTTTATGDSRGGRGALLFAGYFLVTGLLAVHHARNKRFADHRVWMLRHVAMGYSVHMQRLLGHLTWWIFPLLMPG-YTDLTNDGMELRARVFALYFVAGVVLTVGPMEVWLRHTLPSGKVLR 281          
BLAST of mRNA_C-linearis_contig73.14939.1 vs. uniprot
Match: D7FX30_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX30_ECTSI)

HSP 1 Score: 349 bits (896), Expect = 2.140e-117
Identity = 182/280 (65.00%), Postives = 210/280 (75.00%), Query Frame = 0
Query:    2 GQSNPPTLVGRILRHPRFSAVVWWNFLLMSFIMVIHNLVFQSWGIGTFDSITRLVERRGEQGFFD-STPLYDAEGKPSFLQYARSPAGRFMHILPAGLWSVIAPLQLSPTFRARHRTAHRRLGRLFIFMSASIAFGLVPLILSGAT-----KEVRKSAVVDGIPLAIMVYFLAVGLLAVHHARNKRFAEHRVWMLRHVAMGYSVHMQRLLGYLTWWALPLVLPSTYTELSHEGSQLRSDVFSYYFIAGALVTVGSMEVWLRHTSPTGQVLREKDYANGGK 275
            GQ     L+  +L H RFS  +W   +L+SFIMV+HNLVF+SWGIGTF SITR +E  GEQG F  S+PL DAEGKPS L YAR+PAGR MHILPAGLWSVIAPLQLSP+FRA+HRTAHRRLGRLFIFMS SI+ GLVPL+LSGA         R+S V  G       YFL  GLLAVHHARNKRFA+HRVWMLRHVAMGYSVHMQRLLG+LTWW  PL++P  YT+ ++ G +LR++VF  YF  G  +TVG MEVWLRHTSP+G     KD A G +
Sbjct:   17 GQPAGGRLMLGVLEHRRFSTAMWSMLMLLSFIMVVHNLVFRSWGIGTFPSITRRIEALGEQGTFSRSSPLIDAEGKPSILAYARTPAGRVMHILPAGLWSVIAPLQLSPSFRAKHRTAHRRLGRLFIFMSVSISLGLVPLVLSGAPTTPNWSNGRESLVFAG-------YFLVTGLLAVHHARNKRFADHRVWMLRHVAMGYSVHMQRLLGHLTWWMFPLLMPG-YTDFTNGGKELRANVFISYFFVGLALTVGPMEVWLRHTSPSG-----KDVARGAR 283          
BLAST of mRNA_C-linearis_contig73.14939.1 vs. uniprot
Match: D7FX31_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX31_ECTSI)

HSP 1 Score: 343 bits (881), Expect = 2.550e-116
Identity = 167/252 (66.27%), Postives = 202/252 (80.16%), Query Frame = 0
Query:   17 PRFSAVVWWNFLLMSFIMVIHNLVFQSWGIGTFDSITRLVERRGEQGFFDSTPLYDAEGKPSFLQYARSPAGRFMHILPAGLWSVIAPLQLSPTFRARHRTAHRRLGRLFIFMSASIAFGLVPLILSGATKEVRKSAVVDGIPLAIMVYFLAVGLLAVHHARNKRFAEHRVWMLRHVAMGYSVHMQRLLGYLTWWALPLVLPSTYTELSHEGSQLRSDVFSYYFIAGALVTVGSMEVWLRHTSPTGQVLREK 268
            P  S  +W  FLL+S IMV HN+V +SWGIG+F SIT  V R+GEQGFF STPLYDAEGKPSFL YAR+PAGRFMHILPAGLWSVIAPLQL+P+FRA+HRTAHRRLGRLFIFMS S+A G+VP++LSGA+  +R+S  VDG    +  YFLA G+LA  HAR+KRFA+HR+W+LRHVAMGY+ H+QRLL  L+WWA+PLV P+ YTELS EG+ LR DVF  YF+   ++ VG ME+WLRHT+     LRE+
Sbjct:    2 PWLSKAIWSLFLLLSCIMVFHNVVLRSWGIGSFASITTQVVRQGEQGFFRSTPLYDAEGKPSFLAYARTPAGRFMHILPAGLWSVIAPLQLNPSFRAKHRTAHRRLGRLFIFMSVSMALGVVPIVLSGASL-IRRSVAVDGGLFTLAAYFLATGVLAATHARSKRFADHRIWILRHVAMGYAAHVQRLLAALSWWAIPLVAPAKYTELSPEGALLRGDVFGGYFLVSIVLCVGLMEMWLRHTTTASGTLREE 252          
BLAST of mRNA_C-linearis_contig73.14939.1 vs. uniprot
Match: A0A6H5JCE1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCE1_9PHAE)

HSP 1 Score: 123 bits (309), Expect = 5.010e-32
Identity = 68/109 (62.39%), Postives = 75/109 (68.81%), Query Frame = 0
Query:   91 MHILPAGLWSVIAPLQLSPTFRARHRTAHRRLGRLFIFMSASIAFGLVPLILSGATKEVRKSAVVDGIPLAIMV-------------YFLAVGLLAVHHARNKRFAEHR 186
            MHILPAGLWSVIAP QLSP+FRA+HRTAHRRLGRLFI MS SIA GLVPL+LS A         +   P A++V             YFL  GLLAVHHARNK FA+HR
Sbjct:    1 MHILPAGLWSVIAPQQLSPSFRAKHRTAHRRLGRLFILMSVSIALGLVPLVLSVAPTTPASKTTLG--PSALIVDWSDGRESLVFSGYFLVTGLLAVHHARNKGFADHR 107          
BLAST of mRNA_C-linearis_contig73.14939.1 vs. uniprot
Match: A0A836CPM6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPM6_9STRA)

HSP 1 Score: 101 bits (251), Expect = 1.280e-21
Identity = 81/233 (34.76%), Postives = 109/233 (46.78%), Query Frame = 0
Query:   54 RLVERRGEQGFFDSTPLYDAEGKPSFLQYARSPAGRFMHILPAGLWSVIAPLQLSPTFRARHRTAHRRLGRLFIFMSASIAFGLVPLILSGATKE---VRKSAVVDGIPLAIM-VYFLAVGLLAVHHARNKRFAEHRVWMLRHVAMGYSVHMQRLLGYLTWWALPLVLPSTYTELSHEGSQLRSDVFSYYFIAGALVTVGSMEVWLRHTSPTGQ-VLREKDYANGGKAASAKA 281
            RLV R  ++G F +  L + +G P  L+Y   P  R  H+LPA +W+V+AP+QLS T R R    HR  GR+F+  S  IA GL  + L    K       +   D + L+ M  +F+  G   V  AR      H VWMLRH A GY V +QR +  LT  AL               S+     F    +  A ++V ++EVWL  TS +   VLR    A  G    A A
Sbjct:   19 RLV-RMYKEGRFLTKTLREDDGSPFGLKYKNFPVARLCHMLPAPIWAVLAPIQLSATIRQRFCRVHRVSGRVFMTCSTLIAIGLCSIGLCSIIKNRLTFYTAGFWDLVFLSAMNAWFVLTGACGVARARRSDIRGHHVWMLRHCACGYFVFLQRTMVLLTRGALMR------GGFDLTVSKNAKAWFHVCALVAAAISVTAIEVWLAVTSASAATVLRAPSSAPQGVVVKAAA 244          
BLAST of mRNA_C-linearis_contig73.14939.1 vs. uniprot
Match: A0A7R9VKZ2_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VKZ2_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 6.520e-15
Identity = 47/134 (35.07%), Postives = 72/134 (53.73%), Query Frame = 0
Query:   79 FLQYARSPAGRFMHILPAGLWSVIAPLQLSPTFRARHRTAHRRLGRLFIFMSASIAFGLVPLIL------SGATKEVRKSAVVDGIPL-AIMVYFLAVGLLAVHHARNKRFAEHRVWMLRHVAMGYSVHMQRLL 205
            F +Y +  A +F H+LP  +WS++ PLQL    R R    HR  G LF+  S SI+ GL+ ++       +G  +E+          +  +  YF   G+LA + A+ ++F  HR W++RHVA G  V +QRLL
Sbjct:   23 FTKYTKHQAVQFTHMLPGAIWSLLVPLQLHSGVRKRVPKLHRICGYLFLACSLSISMGLILIMKRRLDFEAGFEEELPPPRYTSQPAIFGLGTYFATTGILASYFAKTRQFVSHRRWVIRHVAAGLFVAVQRLL 156          
BLAST of mRNA_C-linearis_contig73.14939.1 vs. uniprot
Match: A0A6H5JEP7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEP7_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 2.190e-14
Identity = 34/53 (64.15%), Postives = 44/53 (83.02%), Query Frame = 0
Query:  189 MLRHVAMGYSVHMQRLLGYLTWWALPLVLPSTYTELSHEGSQLRSDVFSYYFI 241
            MLRHVAMGYSVHMQRLLG+LTWW  PL++P  YT+L+ +G +LR++VF   F+
Sbjct:    1 MLRHVAMGYSVHMQRLLGHLTWWIFPLLMPG-YTDLTKDGKELRANVFISCFL 52          
BLAST of mRNA_C-linearis_contig73.14939.1 vs. uniprot
Match: A0A7Y7UPX5_9SPHN (DUF2306 domain-containing protein n=2 Tax=Sphingomonadaceae TaxID=41297 RepID=A0A7Y7UPX5_9SPHN)

HSP 1 Score: 76.3 bits (186), Expect = 6.360e-13
Identity = 50/140 (35.71%), Postives = 66/140 (47.14%), Query Frame = 0
Query:   71 YDAEGKPSFL---QYARSPAGRFMHILPAGLWSVIAPLQLSPTFRARHRTAHRRLGRLFI---FMSASIAFGLVPLILSGATKEVRKSAVVDGIPLAIMVYFLAVGLLAVHHARNKRFAEHRVWMLRHVAMGYSVHMQRL 204
            Y   GKP        A  P    +H +PA L  +  P QL P FRARHR AHRR+GR ++   F++A  A  + P  L GA      +A+  G        ++A     +  AR  RFA+H VWM R  A+  S    RL
Sbjct:   36 YGLPGKPGAAPLPNVAIHPVALTLHAVPAALALIAVPFQLHPGFRARHRLAHRRIGRAYVGLVFVAAPAALWIAPSALGGAISAAGFTALALG--------WMATTARGLTAARGGRFADHHVWMTRSAALALSAVTLRL 167          
BLAST of mRNA_C-linearis_contig73.14939.1 vs. uniprot
Match: UPI001FE196F4 (DUF2306 domain-containing protein n=3 Tax=Nocardia TaxID=1817 RepID=UPI001FE196F4)

HSP 1 Score: 74.3 bits (181), Expect = 4.500e-12
Identity = 60/173 (34.68%), Postives = 85/173 (49.13%), Query Frame = 0
Query:   92 HILPAGLWSVIAPLQLSPTFRARHRTAHRRLGRLFIFMSASIAFGLVPLILSGATKEVRKSAVVDGIPLAIMVYFLAVGLLAVHHARNKRFAEHRVWMLRHVAMGYSVHMQRLLGYLTWWALPLVL-PSTYTELSHEGSQLRSDVFSYYFIAGALVTVGSMEVWL-RHTSPTG 262
            H++   +  ++   Q+ P FR  H  AHRRLGR ++F     A GLV L++ GAT      A V  + LA +  +L    +    AR +RFAEHR WM+R VA+  S+ + RLLG      L LVL P   T    + + L   +       G  +++   E WL R  SP G
Sbjct:   58 HVICGSVAILVCGFQVWPWFRREHPAAHRRLGRWYVFAGVLPA-GLVGLVV-GATSPFGPVARVSNVMLATL--WLITTFIGWRMARRRRFAEHRRWMIRSVALTLSIVLNRLLG----GVLLLVLSPRLETSFHGDETLLTQTIAGIGTWLGWTLSLLLAEAWLERGRSPRG 222          
BLAST of mRNA_C-linearis_contig73.14939.1 vs. uniprot
Match: W7INN5_9PSEU (Putative membrane protein n=3 Tax=Actinokineospora TaxID=39845 RepID=W7INN5_9PSEU)

HSP 1 Score: 72.0 bits (175), Expect = 2.730e-11
Identity = 59/173 (34.10%), Postives = 84/173 (48.55%), Query Frame = 0
Query:   92 HILPAGLWSVIAPLQLSPTFRARHRTAHRRLGRLFIFMSASIAFGLVPLILSGATKEVRKSAVVDGIPLAIM-VYFLAVGLLAVHHARNKRFAEHRVWMLRHVAMGYSVHMQRLLGYLTWWALPLVLPSTYTELSHEGSQLRSDVFSYYFIAGALVTVGSMEVWLRHTSPTGQ 263
            HIL + +  V   LQ+ P FR R RTAHR LGR ++F    +  GL  L++ GA         V  + LA++ + F AVG   +   R +R AEHRVWMLR V +  S+   RL+G +      L+ P   T      + +   V       G +V + ++E WLR  S   Q
Sbjct:   53 HILFSTVAMVTGFLQIWPWFRRRFRTAHRHLGRAYVF-GGVLPAGLTGLVV-GAVSPFGPVTRVSNVVLALLWLAFTAVGFRRI---RQRRHAEHRVWMLRSVTLTMSIIFNRLVGAVVG---VLLGPRVDTLFGGSEAAMVQTVALLSAWLGWVVPLAAVEWWLRRGSRRAQ 217          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig73.14939.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J9S6_9PHAE4.230e-12268.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FX30_ECTSI2.140e-11765.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FX31_ECTSI2.550e-11666.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JCE1_9PHAE5.010e-3262.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CPM6_9STRA1.280e-2134.76Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7R9VKZ2_9STRA6.520e-1535.07Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A6H5JEP7_9PHAE2.190e-1464.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7Y7UPX5_9SPHN6.360e-1335.71DUF2306 domain-containing protein n=2 Tax=Sphingom... [more]
UPI001FE196F44.500e-1234.68DUF2306 domain-containing protein n=3 Tax=Nocardia... [more]
W7INN5_9PSEU2.730e-1134.10Putative membrane protein n=3 Tax=Actinokineospora... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018750Protein of unknown function DUF2306, membranePFAMPF10067DUF2306coord: 91..211
e-value: 4.5E-14
score: 52.9
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 42..86
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 87..105
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..41
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 146..156
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 106..124
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 175..194
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 236..255
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 125..145
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 157..174
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 256..282
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 217..235
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 195..216
NoneNo IPR availableTMHMMTMhelixcoord: 154..176
NoneNo IPR availableTMHMMTMhelixcoord: 122..144
NoneNo IPR availableTMHMMTMhelixcoord: 22..41
NoneNo IPR availableTMHMMTMhelixcoord: 236..255
NoneNo IPR availableTMHMMTMhelixcoord: 204..221

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig73contigC-linearis_contig73:183516..189887 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig73.14939.1mRNA_C-linearis_contig73.14939.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig73 183393..190804 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig73.14939.1 ID=prot_C-linearis_contig73.14939.1|Name=mRNA_C-linearis_contig73.14939.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=283bp
MGQSNPPTLVGRILRHPRFSAVVWWNFLLMSFIMVIHNLVFQSWGIGTFD
SITRLVERRGEQGFFDSTPLYDAEGKPSFLQYARSPAGRFMHILPAGLWS
VIAPLQLSPTFRARHRTAHRRLGRLFIFMSASIAFGLVPLILSGATKEVR
KSAVVDGIPLAIMVYFLAVGLLAVHHARNKRFAEHRVWMLRHVAMGYSVH
MQRLLGYLTWWALPLVLPSTYTELSHEGSQLRSDVFSYYFIAGALVTVGS
MEVWLRHTSPTGQVLREKDYANGGKAASAKAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018750DUF2306_membrane