prot_C-linearis_contig72.14928.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig72.14928.1
Unique Nameprot_C-linearis_contig72.14928.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length895
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig72.14928.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 305..359
NoneNo IPR availablePANTHERPTHR16062:SF20coord: 308..406
IPR037382Remodelling complex subunit Rsc/polybromoPANTHERPTHR16062SWI/SNF-RELATEDcoord: 308..406

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig72contigC-linearis_contig72:836403..839646 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig72.14928.1mRNA_C-linearis_contig72.14928.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig72 833873..840258 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig72.14928.1 ID=prot_C-linearis_contig72.14928.1|Name=mRNA_C-linearis_contig72.14928.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=895bp
MRETETDVSTGGDGNGNGPGALDAGIDGDGDSNGDDNGDGAGGADASGGG
DGKRGWKRRRRAPGKDEETGQTADSGEGGKGGGVMGGDGGEGKESEDGGK
SPDGGGGGTEGAEGGAGGDVGAMDGSVDANAESEGADLRGGGEKKRGRKR
GCAGAHNTGDATVDDAEDEPDEGAAGGAGVRRGSRVKKSIAYLGDSDGDD
DDKGKSPKRDTGVVSPSQKGGASFPNTAEDQVEGEKEEAEEEEEDSNGVA
SGVSECTACGERKAYFGNPEGAANEGRRSTGGGGGGGGGGGDGVDVGTGS
DDLLSQLHQQQRQQHQQQHQQQQQQQQQQLHQRERERHQQQHQQRERQYE
QQQQQKQQQQYHSTKHRPQQRQQQPRRPQQGDQGDHSLQPLPSVASIRTP
FPPSHSAASSSSSSTPPFSPTSTTSGFEAWTMAPSSGGDSYFRGAQNNEE
ERARPATTAGPAALSSRDTGPIPIRRKRTPQSHAGAGGARRGGGGGSAGS
FSPGDTGPPLDRAAAADLTSASMAGARTVEGEALPGSHASSPATRSEGGN
GMALLRGAGGLDFPPAALHPGGHRTDDGSFPSTTFDRHARGGYQDFSVNA
CWSPSPSSPEEAGGGNDAEFRRQQHQPALWTLPGGGGRGVDDTRAVANGD
AGPRTAAELAFCRARGGVNTTHPIASSSCASVGRSPAVSAAVAAVSASIN
SRGRALATAGPIFEASAAGESLQHGSAASSRGQERHPIFQQQRGKQPITA
AEFHSRAPDILASPLSEPLSSASSYYAAPAASATAAAADFVDGGHSSLSE
LTPPSALLTYPRGRSNLSWPHEDVHSGTGSISRGHFGYASHPSTAESAAL
RAVGSLALPEGPNMGLGLDSDSSQGIGVVGHTGGGGGGGGGGGV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037382Rsc/polybromo