prot_C-linearis_contig72.14875.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig72.14875.1
Unique Nameprot_C-linearis_contig72.14875.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length325
Homology
BLAST of mRNA_C-linearis_contig72.14875.1 vs. uniprot
Match: A0A6H5KJ22_9PHAE (BED-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ22_9PHAE)

HSP 1 Score: 292 bits (748), Expect = 6.720e-95
Identity = 161/239 (67.36%), Postives = 170/239 (71.13%), Query Frame = 0
Query:    1 MGKKKNKKNPVVETEAWCYYCDRVFEHEEVLIQHQKAKHFKCPTCNKKLSTAGGLVVHNSQVHKETITEVPNAKEGRQSVDFEIYGVNGIPEEACRERAAKKARTSEASAGNGASTAQ-----EIPAADIAAPGQLPGPPGQGMPPQFNGQQQQPMHGMMFPGGPPGPGMGFHPMGQQGFHPGMMGQ------------PPPGFNSMHGGPHMPPHMFGGPRGPNGQMFGGPMQGGFPR 222
            MGKKK +K    ETEAWCYYCDRVFEHEEVLI HQK KH  C  C KKLSTAGGLVVH  QVH+ETI+EVPNAKEGR+SVD EIYG+NGIP EA  ERAAKKAR +  +              E P  + A PGQ P   GQGMPPQFNG Q  PM GMMFPGG PGPGMGFHPMGQ GFHPGMMG             PPP    MHGGP+MPPHM GGPRGPNGQM GGPMQGGFPR
Sbjct:    1 MGKKKKQKVAKDETEAWCYYCDRVFEHEEVLILHQKTKHLSCMFCKKKLSTAGGLVVHAQQVHRETISEVPNAKEGRKSVDLEIYGINGIPAEAWAERAAKKARIAGTNGXXXXXXXXXXXXPETPKVETATPGQQPAXXGQGMPPQFNGHQ--PMPGMMFPGGAPGPGMGFHPMGQPGFHPGMMGPXXXXXXXXXXXXPPP----MHGGPNMPPHMLGGPRGPNGQMLGGPMQGGFPR 233          
BLAST of mRNA_C-linearis_contig72.14875.1 vs. uniprot
Match: A0A835ZE93_9STRA (BED-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE93_9STRA)

HSP 1 Score: 156 bits (394), Expect = 5.960e-40
Identity = 74/111 (66.67%), Postives = 90/111 (81.08%), Query Frame = 0
Query:    1 MGKKKNKKNPVVETEAWCYYCDRVFEHEEVLIQHQKAKHFKCPTCNKKLSTAGGLVVHNSQVHKETITEVPNAKEGRQSVDFEIYGVNGIPEEACRERAAKKARTSEASAG 111
            MGKKK +K    + + WC+YCDRVF+HEEVLIQHQKAKHFKC  CNKKL+TAGGLVVH  QVHKET+T+V NAKEGR+S ++EI+G+ GIP EA  ERAA+KA  +  +AG
Sbjct:    1 MGKKKKQKVEEEKEQPWCFYCDRVFDHEEVLIQHQKAKHFKCLVCNKKLTTAGGLVVHCQQVHKETVTQVQNAKEGRESAEYEIFGMEGIPAEAIAERAARKAAEAAGTAG 111          
BLAST of mRNA_C-linearis_contig72.14875.1 vs. uniprot
Match: A0A0D2SV14_GOSRA (BED-type domain-containing protein n=1 Tax=Gossypium raimondii TaxID=29730 RepID=A0A0D2SV14_GOSRA)

HSP 1 Score: 139 bits (350), Expect = 1.520e-35
Identity = 76/162 (46.91%), Postives = 101/162 (62.35%), Query Frame = 0
Query:    1 MGKKKNKKNPVVETEAWCYYCDRVFEHEEVLIQHQKAKHFKCPTCNKKLSTAGGLVVHNSQVHKETITEVPNAKEGRQSVDFEIYGVNGIPEEACRERAAKKARTSEASAGNGASTAQEIPAADIAAPGQLPGPPGQGMPPQFNGQQQQPMHGMMFPGGPPG 162
            MGKKK +    V ++ WCYYCDR F+ E++L+QHQKAKHFKC  C+KKLSTAGG+ +H  QVHKE++T+VPNAK GR+S D EIYG+ GIP +       ++   + + A        +IP+  +   G +PGP G G PPQ      QPM+    P  P G
Sbjct:    1 MGKKKKR----VPSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKESVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEAPSKAAK-----LDIPSTQLVG-GLMPGPLGVGYPPQSTLGAVQPMYNAAVPVPPVG 152          
BLAST of mRNA_C-linearis_contig72.14875.1 vs. uniprot
Match: T1E1I5_SILLA (C2H2-type zinc finger protein (Fragment) n=1 Tax=Silene latifolia TaxID=37657 RepID=T1E1I5_SILLA)

HSP 1 Score: 132 bits (333), Expect = 2.910e-35
Identity = 59/91 (64.84%), Postives = 75/91 (82.42%), Query Frame = 0
Query:    1 MGKKKNKKNPVVETEAWCYYCDRVFEHEEVLIQHQKAKHFKCPTCNKKLSTAGGLVVHNSQVHKETITEVPNAKEGRQSVDFEIYGVNGIP 91
            MG+KK ++N  V    +CYYCDR F+ E++L+QHQKAKHFKC  CNKKLSTAGG+V+H  QVHKE++T+VPNAKEGR+S + EIYG+ GIP
Sbjct:    1 MGRKKKRQNDKV----FCYYCDREFDDEKILVQHQKAKHFKCHACNKKLSTAGGMVIHVLQVHKESVTKVPNAKEGRESTEIEIYGMQGIP 87          
BLAST of mRNA_C-linearis_contig72.14875.1 vs. uniprot
Match: A0A7S3YKR3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YKR3_HETAK)

HSP 1 Score: 133 bits (334), Expect = 5.590e-35
Identity = 63/101 (62.38%), Postives = 76/101 (75.25%), Query Frame = 0
Query:    1 MGKKKNKKNPVVETEAWCYYCDRVFEHEEVLIQHQKAKHFKCPTCNKKLSTAGGLVVHNSQVHKETITEVPNAKEGRQSVDFEIYGVNGIPEEACRERAAK 101
            MGKKK K     E + WC+YC+R+FE E+VLIQHQK+KHFKC  CNKKLSTAGG+VVH  QVHKETI  V NA + R + D+EIYG+ G+P+EA  E  AK
Sbjct:    1 MGKKKKKTAVREEEKPWCFYCERIFEDEKVLIQHQKSKHFKCHVCNKKLSTAGGMVVHCLQVHKETIKNVHNAIKERDTTDYEIYGMEGVPQEAVDEHRAK 101          
BLAST of mRNA_C-linearis_contig72.14875.1 vs. uniprot
Match: A0A835NC00_9ROSI (BED-type domain-containing protein n=4 Tax=Salix TaxID=40685 RepID=A0A835NC00_9ROSI)

HSP 1 Score: 139 bits (351), Expect = 7.330e-35
Identity = 83/184 (45.11%), Postives = 108/184 (58.70%), Query Frame = 0
Query:    1 MGKKKNKKNPVVETEAWCYYCDRVFEHEEVLIQHQKAKHFKCPTCNKKLSTAGGLVVHNSQVHKETITEVPNAKEGRQSVDFEIYGVNGIPEEACRERAAKKARTSEASAGNGASTAQEIPAADIAAPGQLPGPPGQGMPPQFNGQQQQPMHGMMFPGGPPGPGMGFHPMGQQGFHPGMMGQPP 184
            MGKKK +    V ++ WCYYCDR F+ E++L+QHQKAKHFKC  C+KKLSTAGG+ +H  QVHKE++T+VPNAK GR+S D EIYG+ GIP +            + + A        +IP+A +   G +PGP   G PPQ  G  Q PM+    P  P G  +  HP      HP +   PP
Sbjct:    1 MGKKKKR----VSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKESVTKVPNAKPGRESTDIEIYGMQGIPPDVLASHYGDDEDETPSKAAK-----MDIPSAQLIG-GMVPGPLSTGYPPQPRGAMQ-PMYNSAVPVPPAGWPVPPHPQPWFPPHPAVSISPP 173          
BLAST of mRNA_C-linearis_contig72.14875.1 vs. uniprot
Match: A0A0D2PNY3_GOSRA (BED-type domain-containing protein n=5 Tax=Malvoideae TaxID=214907 RepID=A0A0D2PNY3_GOSRA)

HSP 1 Score: 139 bits (350), Expect = 8.200e-35
Identity = 76/162 (46.91%), Postives = 101/162 (62.35%), Query Frame = 0
Query:    1 MGKKKNKKNPVVETEAWCYYCDRVFEHEEVLIQHQKAKHFKCPTCNKKLSTAGGLVVHNSQVHKETITEVPNAKEGRQSVDFEIYGVNGIPEEACRERAAKKARTSEASAGNGASTAQEIPAADIAAPGQLPGPPGQGMPPQFNGQQQQPMHGMMFPGGPPG 162
            MGKKK +    V ++ WCYYCDR F+ E++L+QHQKAKHFKC  C+KKLSTAGG+ +H  QVHKE++T+VPNAK GR+S D EIYG+ GIP +       ++   + + A        +IP+  +   G +PGP G G PPQ      QPM+    P  P G
Sbjct:    1 MGKKKKR----VPSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKESVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEAPSKAAK-----LDIPSTQLVG-GLMPGPLGVGYPPQSTLGAVQPMYNAAVPVPPVG 152          
BLAST of mRNA_C-linearis_contig72.14875.1 vs. uniprot
Match: A0A1Q3BMZ7_CEPFO (BED-type domain-containing protein (Fragment) n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3BMZ7_CEPFO)

HSP 1 Score: 132 bits (333), Expect = 1.100e-34
Identity = 58/91 (63.74%), Postives = 73/91 (80.22%), Query Frame = 0
Query:    1 MGKKKNKKNPVVETEAWCYYCDRVFEHEEVLIQHQKAKHFKCPTCNKKLSTAGGLVVHNSQVHKETITEVPNAKEGRQSVDFEIYGVNGIP 91
            MGKKK +    V ++ WCYYCDR F+ E++L+QHQKAKHFKC  C+KKLSTAGG+ +H  QVHKE++T+VPNAK GR+S D EIYG+ GIP
Sbjct:    1 MGKKKKR----VPSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKESVTKVPNAKSGRESTDIEIYGMQGIP 87          
BLAST of mRNA_C-linearis_contig72.14875.1 vs. uniprot
Match: UPI0019240AF9 (protein SUPPRESSOR OF FRI 4-like n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=UPI0019240AF9)

HSP 1 Score: 131 bits (329), Expect = 1.140e-34
Identity = 58/91 (63.74%), Postives = 71/91 (78.02%), Query Frame = 0
Query:    1 MGKKKNKKNPVVETEAWCYYCDRVFEHEEVLIQHQKAKHFKCPTCNKKLSTAGGLVVHNSQVHKETITEVPNAKEGRQSVDFEIYGVNGIP 91
            MGKKK +    V +  WCYYCDR F+ E++L+QHQKAKHFKC  C+KKLSTAGG+ +H  QVHKE++T+VPNAK GR S D EIYG+ GIP
Sbjct:    1 MGKKKKR----VSSTVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKESVTKVPNAKPGRDSTDIEIYGMQGIP 87          
BLAST of mRNA_C-linearis_contig72.14875.1 vs. uniprot
Match: A0A1U8NA11_GOSHI (protein SUPPRESSOR OF FRI 4-like n=28 Tax=Malvoideae TaxID=214907 RepID=A0A1U8NA11_GOSHI)

HSP 1 Score: 139 bits (349), Expect = 1.270e-34
Identity = 74/157 (47.13%), Postives = 99/157 (63.06%), Query Frame = 0
Query:    1 MGKKKNKKNPVVETEAWCYYCDRVFEHEEVLIQHQKAKHFKCPTCNKKLSTAGGLVVHNSQVHKETITEVPNAKEGRQSVDFEIYGVNGIPEEACRERAAKKARTSEASAGNGASTAQEIPAADIAAPGQLPGPPGQGMPPQFNGQQQQPMHGMMFP 157
            MGKKK +    V ++ WCYYCDR F+ E++L+QHQKAKHFKC  C+KKLSTAGG+ +H  QVHKE++T+VPNAK GR+S D EIYG+ GIP +       ++   + + A        +IP+  +   G +PGP G G PPQ      QPM+    P
Sbjct:    1 MGKKKKR----VPSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKESVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEAPSKAAK-----LDIPSTQLVG-GLMPGPLGVGYPPQSTLGAVQPMYNAAVP 147          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig72.14875.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KJ22_9PHAE6.720e-9567.36BED-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A835ZE93_9STRA5.960e-4066.67BED-type domain-containing protein n=1 Tax=Tribone... [more]
A0A0D2SV14_GOSRA1.520e-3546.91BED-type domain-containing protein n=1 Tax=Gossypi... [more]
T1E1I5_SILLA2.910e-3564.84C2H2-type zinc finger protein (Fragment) n=1 Tax=S... [more]
A0A7S3YKR3_HETAK5.590e-3562.38Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A835NC00_9ROSI7.330e-3545.11BED-type domain-containing protein n=4 Tax=Salix T... [more]
A0A0D2PNY3_GOSRA8.200e-3546.91BED-type domain-containing protein n=5 Tax=Malvoid... [more]
A0A1Q3BMZ7_CEPFO1.100e-3463.74BED-type domain-containing protein (Fragment) n=1 ... [more]
UPI0019240AF91.140e-3463.74protein SUPPRESSOR OF FRI 4-like n=1 Tax=Hibiscus ... [more]
A0A1U8NA11_GOSHI1.270e-3447.13protein SUPPRESSOR OF FRI 4-like n=28 Tax=Malvoide... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 40..63
e-value: 0.06
score: 22.5
coord: 16..39
e-value: 17.0
score: 11.3
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 42..63
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 40..63
score: 8.912
NoneNo IPR availableGENE3D3.30.160.60coord: 1..69
e-value: 1.3E-6
score: 30.3
NoneNo IPR availablePANTHERPTHR23215ZINC FINGER PROTEIN 207coord: 1..324
IPR003656Zinc finger, BED-typePROSITEPS50808ZF_BEDcoord: 11..70
score: 9.131
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 16..63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig72contigC-linearis_contig72:294334..296580 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig72.14875.1mRNA_C-linearis_contig72.14875.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig72 294334..296580 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig72.14875.1 ID=prot_C-linearis_contig72.14875.1|Name=mRNA_C-linearis_contig72.14875.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=325bp
MGKKKNKKNPVVETEAWCYYCDRVFEHEEVLIQHQKAKHFKCPTCNKKLS
TAGGLVVHNSQVHKETITEVPNAKEGRQSVDFEIYGVNGIPEEACRERAA
KKARTSEASAGNGASTAQEIPAADIAAPGQLPGPPGQGMPPQFNGQQQQP
MHGMMFPGGPPGPGMGFHPMGQQGFHPGMMGQPPPGFNSMHGGPHMPPHM
FGGPRGPNGQMFGGPMQGGFPRGPPPGPPGPPPRGLPPGAPPPSAPPGPP
PRGLVPPLFPAGADAAQQPGMVGNALTRAPTHGAPGVPPHASGLPGQAQQ
PPAAAGDEEISMEEKRAELAAYKV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR003656Znf_BED
IPR036236Znf_C2H2_sf