prot_C-linearis_contig72.14872.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig72.14872.1
Unique Nameprot_C-linearis_contig72.14872.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length251
Homology
BLAST of mRNA_C-linearis_contig72.14872.1 vs. uniprot
Match: D7G4S4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4S4_ECTSI)

HSP 1 Score: 392 bits (1006), Expect = 5.320e-136
Identity = 204/255 (80.00%), Postives = 223/255 (87.45%), Query Frame = 0
Query:    1 MRIISALTVAVLAGTA--VAFAPPSTQLRPVNTRSN--AALKMVYIPDGLSPAEWKKIKAEEKKKKENLGKLGPSRFKSRSFQAWQESGAGHLFPVDPKKVKNGEIPMDKVPYMQRGGAWDNSDLVTKKGQENMKKKKEKVVFNNKISKGVEKKAWSKLDKEYAAGGYLKEQSVSIFGGTPLPWIS-TPQKSPGVETDNKRRLGVQSKVKRAATNAPMSAAVRRRVEKEAAEERKKQERLTKQLNGEKKGPFGLW 250
            MR +S   VA LAGT+  VAFAPPS  LRPV TRS+  AALKMVYIPDGLSPAEWKKIK  +KKK+ENLGKLGPSRFKSRSFQAWQESGAGHLFPVDPKKVK+GEIPMDKVPYMQRGGAWDNSDL +KKGQ  M+ +K+KVV NNK+SKGV++KAWS  DK YAAGGY KEQSVSIFGGTPLPW+S   QKSPGVE DNKRR+  Q KVKRAATNAPMSAAV+RRVEKEAAEER+KQE+L KQLNGEKKG FG+W
Sbjct:    1 MRTVSTFAVAALAGTSSVVAFAPPSAPLRPVTTRSSSSAALKMVYIPDGLSPAEWKKIKDADKKKQENLGKLGPSRFKSRSFQAWQESGAGHLFPVDPKKVKSGEIPMDKVPYMQRGGAWDNSDLTSKKGQAAMRARKDKVVLNNKVSKGVKQKAWSSTDKAYAAGGYKKEQSVSIFGGTPLPWVSGAAQKSPGVEVDNKRRINEQKKVKRAATNAPMSAAVKRRVEKEAAEERRKQEKLKKQLNGEKKGLFGMW 255          
BLAST of mRNA_C-linearis_contig72.14872.1 vs. uniprot
Match: A0A7S2US33_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2US33_9STRA)

HSP 1 Score: 172 bits (437), Expect = 4.250e-50
Identity = 95/173 (54.91%), Postives = 115/173 (66.47%), Query Frame = 0
Query:    9 VAVLAGTAVAFAPPS-TQLRPVNTRSNAALKMVYIPDGLSPAEWKKIKAEEKKKKENLGKLGPSRFKSRSFQAWQESGAGHLFPVDPKKVKNGEIPMDKVPYMQRGGAWDNSDLVTKKGQENMKKKKEKVVFNNKISKGVEKKAWSKLDKEYAAGGYLKEQSVSIFGGTPLPW 180
            ++ L G A AF P +   L PV T +   L+M Y+P+GL+P +WKKI+ E+ K K NLG++GP RFKSRSF AWQ +G  HLFPVDPKKVK GEI M  VPYMQRGGAWDNSDL+ KKG++                    K  WS  DK+YAAGG+ KEQSVSIFGG  +PW
Sbjct:   11 ISALLGIAQAFIPNAGLGLSPVRTCT--PLRMGYVPEGLTPEQWKKIQ-EKDKAKGNLGEMGPKRFKSRSFAAWQAAGGKHLFPVDPKKVKTGEIAMKDVPYMQRGGAWDNSDLI-KKGEK------------------APKVEWSDRDKQYAAGGFRKEQSVSIFGGVSMPW 161          
BLAST of mRNA_C-linearis_contig72.14872.1 vs. uniprot
Match: A0A836CGF0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGF0_9STRA)

HSP 1 Score: 165 bits (417), Expect = 6.320e-47
Identity = 110/248 (44.35%), Postives = 142/248 (57.26%), Query Frame = 0
Query:    8 TVAVLAGTAVAFAPPSTQLRPVNTRSNAALKMVYIPDGLSPAEWKKIKAEEKKK-KENLGKLGPSRFKSRSFQAWQES----GAGHLFPVDPKKVKNGEIPMDKVPYMQRGGAWDNSDLVTKKGQENMKKKKEKVVFNNKISKGVEKKAWSKLDKEYAAGGYLKEQSVSIFG-GTPLPWISTPQKSPGVETDNKRRLGVQSKVKRAAT-NAPMSAAVRRRVEKEAA----EERKKQERLTKQLNGEKK 244
            TV ++A  A  FAP +     +   + ++L M YIPDGL+P +WK IK +E++K  +NLG++G + FKSRSFQAWQE+      GHLFPVDP KVK GEIP+ KVPYMQRGG+WD+ DLV K+                   KG++KK WS LDK YA GG    QS++IFG G  LPW            D    L  Q+K KRA +  AP +     RVEKE A    E  KK++ L+  L   K+
Sbjct:    9 TVVLVACGAHGFAPSAALPAALARPATSSLSMAYIPDGLTPEQWKVIKEKEQEKASKNLGRVGATSFKSRSFQAWQEAMERGEGGHLFPVDPVKVKRGEIPLSKVPYMQRGGSWDDEDLVKKE-------------------KGIKKKEWSPLDKAYATGGERANQSINIFGRGANLPWNGRAAFKDPKAIDP---LKEQAKWKRATSVTAPPNKMALARVEKEKAKLEAERLKKEQALSPTLKENKR 234          
BLAST of mRNA_C-linearis_contig72.14872.1 vs. uniprot
Match: A0A6S9GSP2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GSP2_HETAK)

HSP 1 Score: 158 bits (400), Expect = 1.640e-44
Identity = 87/163 (53.37%), Postives = 112/163 (68.71%), Query Frame = 0
Query:   18 AFAPPSTQLRPVNTRSNAALKMVYIPDGLSPAEWKKIKAEEKKKKENLGKLGPSRFKSRSFQAWQESGAGHLFPVDPKKVKNGEIPMDKVPYMQRGGAWDNSDLVTKKGQENMKKKKEKVVFNNKISKGVEKKAWSKLDKEYAAGGYLKEQSVSIFGGTPLPW 180
            AF P + +L  V   SN  +K  Y+PDGLS  ++ KIK EE +K +NLGK+GP+RFKSRSF  W  +G  HLFPVDP+KVK+GEI ++ VPYMQR GAWDNSDL   KG +N++ K       NK++  V+K   +K + EY  GG+ KEQSVSIFGG  +PW
Sbjct:   20 AFLPSAQRLSVVRNESNVQMKG-YVPDGLSAEQYAKIKKEEAEKLKNLGKVGPNRFKSRSFADWHAAGGKHLFPVDPRKVKSGEIAIEDVPYMQRKGAWDNSDL---KGNKNVRDK-------NKLN--VQK---TKSEVEYEKGGFRKEQSVSIFGGRNMPW 166          
BLAST of mRNA_C-linearis_contig72.14872.1 vs. uniprot
Match: A0A835ZE56_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE56_9STRA)

HSP 1 Score: 148 bits (374), Expect = 1.800e-40
Identity = 100/238 (42.02%), Postives = 133/238 (55.88%), Query Frame = 0
Query:   12 LAGTAVAFAPPSTQLRPVNTRSNAALKMVYIPDGLSPAEWKKIKAEEKKK-KENLGKLGPSRFKSRSFQAWQ---ESG-AGHLFPVDPKKVKNGEIPMDKVPYMQRGGAWDNSDLVTKKGQENMKKKKEKVVFNNKISKGVEKKAWSKLDKEYAAGGYLKEQSVSIFG-GTPLPWISTPQKSPGVETDNKRRLGVQSKVKRAATNAPMSAAVRRRVEKE----AAEERKKQERLTKQL 239
            L    +AFAP +    P    S   + M YIPDGL+ A+W  IK +E+ K  +NLG++G + FKSRSFQAWQ   E+G  GHLFPVDP+KVK GEI + +VPYMQR G+WD+ DL+ K+                   KG++KKAW+  DK YA GG   +QSV+IFG G  LPW            D  +    Q+K +RA +  P +     RV KE    AA++ KK++ L   L
Sbjct:   17 LVNATLAFAPGAAL--PSCATSTCQVTMRYIPDGLTQAQWDAIKEKEQAKASKNLGRVGATSFKSRSFQAWQQAMENGEGGHLFPVDPRKVKTGEIKLSEVPYMQRRGSWDDEDLLKKE-------------------KGIQKKAWTPTDKAYADGGERAQQSVNIFGTGANLPWNGRAAFKDPTAVDPIKE---QAKWRRATSPLPPNKMALERVAKEKAKLAAQQAKKEKELAPTL 230          
BLAST of mRNA_C-linearis_contig72.14872.1 vs. uniprot
Match: D7FWZ5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWZ5_ECTSI)

HSP 1 Score: 138 bits (347), Expect = 9.250e-37
Identity = 74/130 (56.92%), Postives = 86/130 (66.15%), Query Frame = 0
Query:   35 AALKMVYIPDGLSPAEWKKIK---AEEKKKKENLGKLGPSRFKSRSFQAWQESGAGHLFPVDPKKVKNGEIPMDKVPYMQRGGAWDNSDLVTKKGQENMKKKKEKVVFNNKISKGVEKKAWSKLDKEYAA 161
            A L M Y+PDGLSP +WKK++   AE+KKK  +LG++G   FKSRS QAWQE GAGHLFPVDPKKVK+GEIP +K PYMQR GAWDNSDL  K    N++KK                  WS  DK YAA
Sbjct:   61 ADLDMKYVPDGLSPEQWKKMQKEEAEKKKKMGDLGQVGVKSFKSRSLQAWQEDGAGHLFPVDPKKVKSGEIPPEKTPYMQRKGAWDNSDLAKK----NLQKK------------------WSATDKAYAA 168          
BLAST of mRNA_C-linearis_contig72.14872.1 vs. uniprot
Match: A0A1Z5KB69_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KB69_FISSO)

HSP 1 Score: 133 bits (334), Expect = 8.520e-35
Identity = 76/161 (47.20%), Postives = 97/161 (60.25%), Query Frame = 0
Query:   41 YIPDGLSPAEWKKIKAEEKKK--KENLGKLGPSRFKSRSFQAWQES----GAGHLFPV--DPKKVKNGEIPMDKVPYMQRGGAWDNSDLVTKKGQENMKKKKEKVVFNNKISKGVEKKAWSKLDKEYAAGGYLKEQSVSIFG-GTPLPWISTPQKSPGVET 192
            Y+PDG +P  +KK K EE+KK  K+NLG++GP  FKSRSFQ++QE+     A HL PV    ++VK GE+  + +PYMQRGG+WDNSD+                       KG +K  W + DKEYA GGYLKEQSVSIFG G  L W  T  +S   E+
Sbjct:   38 YVPDGFTPESYKKFKEEERKKNEKKNLGRVGPKGFKSRSFQSFQEALERGEATHLLPVMNAKERVKKGELKWEDIPYMQRGGSWDNSDV-----------------------KGAKKVRWLQSDKEYANGGYLKEQSVSIFGYGQGLDWTGTRSRSGPAES 175          
BLAST of mRNA_C-linearis_contig72.14872.1 vs. uniprot
Match: A0A7S1D0M1_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D0M1_CYCTE)

HSP 1 Score: 126 bits (317), Expect = 2.750e-32
Identity = 74/149 (49.66%), Postives = 89/149 (59.73%), Query Frame = 0
Query:   41 YIPDGLSPAEWKKIKAEEKKK--KENLGKLGPSRFKSRSFQAWQES----GAGHLFPV--DPKKVKNGEIPMDKVPYMQRGGAWDNSDLVTKKGQENMKKKKEKVVFNNKISKGVEKKAWSKLDKEYAAGGYLKEQSVSIFG-GTPLPW 180
            Y+P G +P ++KK K EEKKK  K+NLG+LGP  F+SRSFQ++QE+     A HL PV    +KV  GEI  + VPYMQRGG+WDNSD+                       KG +KK W   DK YA GGY KEQSVSIFG G  L W
Sbjct:   60 YVPSGFTPEQYKKFKEEEKKKMQKQNLGRLGPKGFQSRSFQSFQEALERGEAKHLLPVFNAKEKVARGEIRPEDVPYMQRGGSWDNSDV-----------------------KGAKKKRWLSSDKSYADGGYKKEQSVSIFGYGEGLDW 185          
BLAST of mRNA_C-linearis_contig72.14872.1 vs. uniprot
Match: A0A6U3BRN0_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A6U3BRN0_9STRA)

HSP 1 Score: 125 bits (315), Expect = 5.450e-32
Identity = 75/171 (43.86%), Postives = 93/171 (54.39%), Query Frame = 0
Query:   31 TRSNAALKMVYIPDGLSPAEWKKIKAEEKKK--KENLGKLGPSRFKSRSFQAWQES----GAGHLFPV--DPKKVKNGEIPMDKVPYMQRGGAWDNSDLVTKKGQENMKKKKEKVVFNNKISKGVEKKAWSKLDKEYAAGGYLKEQSVSIFG-GTPLPWISTPQKSPGVET 192
            TR        Y+PDG +P  +KK K  E KK  K+NLGKLGP  FKSRSFQ++QE+     A HL PV    ++VK GE+  + +PYMQRGG+WDNSD+   K                       KK W   DKEYA GGY KEQSVS+ G G+ L W     ++   ET
Sbjct:   27 TRDGLTRAYAYVPDGFTPESYKKFKEAEAKKLQKQNLGKLGPKGFKSRSFQSFQEALERGEADHLMPVFNAKERVKKGELRTEDIPYMQRGGSWDNSDVKNAKN----------------------KKRWLSSDKEYANGGYKKEQSVSVLGFGSGLDWTGKGARTGPSET 175          
BLAST of mRNA_C-linearis_contig72.14872.1 vs. uniprot
Match: B8C2Q6_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C2Q6_THAPS)

HSP 1 Score: 124 bits (310), Expect = 2.790e-31
Identity = 84/200 (42.00%), Postives = 109/200 (54.50%), Query Frame = 0
Query:    1 MRIISALTVAVLAGTAVAF-APPSTQLRPVNTRSNAALKMVYIPDGLSPAEWKKIKAEEKKKKE-----NLGKLGPSRFKSRSFQAWQES----GAGHLFPVDPKK--VKNGEIPMDKVPYMQRGGAWDNSDLVTKKGQENMKKKKEKVVFNNKISKGVEKKAWSKLDKEYAAGGYLKEQSVSIFG-GTPLPWISTPQKS 187
            M+  +ALT+A +A TA AF + PSTQL   ++R +  L   YIP G +   W   K +EKK KE     NLG++GP  F+SRSFQ++QE+       HL PV+  K  +  GE+  + +PYMQRGG WDNSDL                       KG +K  W   DKEYA+GG+ K QSVSIFG G  L W     K+
Sbjct:    1 MKTSAALTLAFVASTATAFQSTPSTQL---SSRQSTQL-YEYIPSGFTKESWATFKNKEKKAKEEQMKKNLGRVGPKGFQSRSFQSFQEALERGETTHLLPVENAKERIAKGELKPEDIPYMQRGGNWDNSDL-----------------------KGAKKIRWLNSDKEYASGGFKKSQSVSIFGEGAGLDWTGKRDKT 173          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig72.14872.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4S4_ECTSI5.320e-13680.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2US33_9STRA4.250e-5054.91Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A836CGF0_9STRA6.320e-4744.35Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6S9GSP2_HETAK1.640e-4453.37Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A835ZE56_9STRA1.800e-4042.02Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FWZ5_ECTSI9.250e-3756.92Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A1Z5KB69_FISSO8.520e-3547.20Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S1D0M1_CYCTE2.750e-3249.66Hypothetical protein (Fragment) n=1 Tax=Cyclophora... [more]
A0A6U3BRN0_9STRA5.450e-3243.86Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
B8C2Q6_THAPS2.790e-3142.00Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 218..242
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..250
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.738

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig72contigC-linearis_contig72:284155..286629 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig72.14872.1mRNA_C-linearis_contig72.14872.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig72 284085..288060 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig72.14872.1 ID=prot_C-linearis_contig72.14872.1|Name=mRNA_C-linearis_contig72.14872.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=251bp
MRIISALTVAVLAGTAVAFAPPSTQLRPVNTRSNAALKMVYIPDGLSPAE
WKKIKAEEKKKKENLGKLGPSRFKSRSFQAWQESGAGHLFPVDPKKVKNG
EIPMDKVPYMQRGGAWDNSDLVTKKGQENMKKKKEKVVFNNKISKGVEKK
AWSKLDKEYAAGGYLKEQSVSIFGGTPLPWISTPQKSPGVETDNKRRLGV
QSKVKRAATNAPMSAAVRRRVEKEAAEERKKQERLTKQLNGEKKGPFGLW
*
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