prot_C-linearis_contig72.14851.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig72.14851.1
Unique Nameprot_C-linearis_contig72.14851.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length157
Homology
[Close]
BLAST of mRNA_C-linearis_contig72.14851.1 vs. uniprot
Match: A0A6H5L1X5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1X5_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 3.050e-14
Identity = 43/95 (45.26%), Postives = 62/95 (65.26%), Query Frame = 0 
Query:   33 LGLSREDMNTTVNAVSQATIASMLASLEDQLNAYNATHPAEEDASSQSTAGSSQSAPV--AVAVRTTQAPGFDLIGRARAWLHEREDPADGGGGK 125
            +GLSR++M   +N + Q  I++M+ SL      +N+  P + DASSQ T  SSQS+P    + ++  QAPGFDL+ RARAW+  R+ PA+GGG K
Sbjct:    1 MGLSRKEMCLLMNNIGQDIISNMMGSLGTDQRDFNSCQPKDADASSQETQESSQSSPADAVLQLQPEQAPGFDLLRRARAWVDARKLPAEGGGNK 95
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig72.14851.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L1X5_9PHAE3.050e-1445.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig72contigC-linearis_contig72:18417..20121 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig72.14851.1mRNA_C-linearis_contig72.14851.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig72 18334..20131 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig72.14851.1 ID=prot_C-linearis_contig72.14851.1|Name=mRNA_C-linearis_contig72.14851.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=157bp
MFSYVLSRHSTLIAVSAESGEPEREPYEAHEVLGLSREDMNTTVNAVSQA
TIASMLASLEDQLNAYNATHPAEEDASSQSTAGSSQSAPVAVAVRTTQAP
GFDLIGRARAWLHEREDPADGGGGKKIKSSTSFCSRTSTTYIRKTWRSAS
TNPAGT*
back to top