prot_C-linearis_contig7.14646.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig7.14646.1
Unique Nameprot_C-linearis_contig7.14646.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length216
Homology
BLAST of mRNA_C-linearis_contig7.14646.1 vs. uniprot
Match: A0A6H5KQ06_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ06_9PHAE)

HSP 1 Score: 174 bits (442), Expect = 8.340e-49
Identity = 92/202 (45.54%), Postives = 127/202 (62.87%), Query Frame = 0
Query:    1 MLERVLAAHTKAAGAGTRVWHVFGGDKLIADFAQTVIVAVMLNCLCDAEHWPVDKPGDMETPLSLAERKLRAFVELKNGGFPSAKAKEFQNALWYGMFNFITGPRRCAHPIKTLQKHQWTDIRNLPYIDPYADDGRTDLSPPEDTXXXXXXXXXXXXXXEENTNTDIFSREE---LLVRETPQNRG-DVIIEASELESFLDN 198
            +L ++++AH+ +A    R  HVFGGDKL++DF Q VI+ + L+ LCDAE++PV   G+ ET L LAERKL AF +++NGGF   K K FQ ALWYG++N+ TG RR  HP+ TL K Q+    N+ Y+ P+ADDGR DL P                   ++   D  S +E   ++VRETP  RG D+II+ +EL +FLDN
Sbjct:  273 ILHKIISAHSASARRDLRPMHVFGGDKLVSDFTQQVIIPLALDALCDAEYYPVPPVGEYETVLCLAERKLNAFGQMRNGGFSEPKYKMFQKALWYGLYNYATGVRRFGHPLATLHKSQFHHRGNMLYVAPWADDGRPDLMP------------------RDSIEEDSSSEDEDNGVIVRETPFQRGEDLIIDETELPTFLDN 456          
BLAST of mRNA_C-linearis_contig7.14646.1 vs. uniprot
Match: A0A6H5KMT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMT9_9PHAE)

HSP 1 Score: 105 bits (263), Expect = 1.730e-25
Identity = 67/158 (42.41%), Postives = 87/158 (55.06%), Query Frame = 0
Query:   45 LCDAEHWPVDKPGDMETPLSLAERKLRAFVELKNGGFPSAKAKEFQNALWYGMFNFITGPRRCAHPIKTLQKHQWTDIRNLPYIDPYADD------GRTDLSPPEDTXXXXXXXXXXXXXXEENTNTDIFSREELLVRETPQNR-GDVIIEASELESF 195
            LCDAE+  V+  GD+ET   LAERK++AF    NGG  + KA+EFQNALWY +F F TG  R A PI  + K  +T    + +I P+A        G+TDLS PE +                         EE+LVRETP +R  DVI+EAS+L+ F
Sbjct:    2 LCDAENQQVEPAGDVETKQCLAERKVQAFAHRMNGGHKTKKAREFQNALWYYLFEFATGQFRLAEPILRVPKKDFTKKSIVTHIAPFAGKFFPHGRGKTDLSGPEVSNEGD---------------------EEILVRETPFDRPDDVIVEASDLDDF 138          
BLAST of mRNA_C-linearis_contig7.14646.1 vs. uniprot
Match: A0A6H5KF40_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF40_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 5.680e-19
Identity = 48/135 (35.56%), Postives = 74/135 (54.81%), Query Frame = 0
Query:    1 MLERVLAAHTKAAGAGTR----VWHVFGGDKLIADFAQTVIVAVMLNCLCDAEHWPVDKPGDMETPLSLAERKLRAFVELKNGGFPSAKAKEFQNALWYGMFNFITGPRRCAHPIKTLQKHQWTDIRNLPYIDPY 131
            ++ RV+   TKA  A TR    + ++ G ++L  DF   V+   +L+   D    PV++ G  ET +    RK RA+++L  GGF SA A+ FQ +LWY +F F+TGPRRC   I T+    +     + ++ PY
Sbjct:   78 LMSRVMWRFTKAYQASTRKTLTLGYLLGPERLKEDFLGQVVTPALLHAANDIAALPVNEIGTHETIVCKVTRKSRAWIKLSAGGFGSADARAFQESLWYNLFQFMTGPRRCTAAILTIPSSDFHKPEIMRFLAPY 212          
BLAST of mRNA_C-linearis_contig7.14646.1 vs. uniprot
Match: A0A6H5K5R4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5R4_9PHAE)

HSP 1 Score: 90.9 bits (224), Expect = 1.250e-17
Identity = 47/135 (34.81%), Postives = 73/135 (54.07%), Query Frame = 0
Query:    1 MLERVLAAHTKAAGAGTR----VWHVFGGDKLIADFAQTVIVAVMLNCLCDAEHWPVDKPGDMETPLSLAERKLRAFVELKNGGFPSAKAKEFQNALWYGMFNFITGPRRCAHPIKTLQKHQWTDIRNLPYIDPY 131
            ++ R++   TKA  A TR    +  + G ++L  DF   V+   +L+   D    PV++ G  ET +    RK RA+++L  GGF SA A+ FQ +LWY +F F+TGPRRC   I T+    +     + ++ PY
Sbjct:  335 LMSRIMWRFTKAHQASTRKALTLGFLLGPERLKDDFLGQVVTPALLHAANDIAALPVNEIGTHETIVCKVTRKSRAWIKLSAGGFGSANARAFQESLWYNLFQFMTGPRRCTAAILTIPSSDFHKPEIMRFLAPY 469          
BLAST of mRNA_C-linearis_contig7.14646.1 vs. uniprot
Match: A0A6H5KR20_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR20_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 1.420e-15
Identity = 43/118 (36.44%), Postives = 67/118 (56.78%), Query Frame = 0
Query:    1 MLERVLAAHTKAAGAGTR----VWHVFGGDKLIADFAQTVIVAVMLNCLCDAEHWPVDKPGDMETPLSLAERKLRAFVELKNGGFPSAKAKEFQNALWYGMFNFITGPRRCAHPIKTL 114
            ++ R++   TKA  A TR    + ++ G ++L  DF   V+   +L+   D    PV++ G  ET +    RK +A+++L  GG  SA A+ FQ +LWY +F F+TGPRRC   I T+
Sbjct:  185 LMFRIMWRFTKAHQASTRKVLTLGYLLGPERLKEDFLGQVVTPALLHAANDIAALPVNEIGTHETIVCKVIRKSKAWIKLSAGGIGSANARAFQESLWYNLFQFMTGPRRCTAAILTI 302          
BLAST of mRNA_C-linearis_contig7.14646.1 vs. uniprot
Match: A0A6H5KHD1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHD1_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 6.360e-13
Identity = 35/98 (35.71%), Postives = 54/98 (55.10%), Query Frame = 0
Query:   34 QTVIVAVMLNCLCDAEHWPVDKPGDMETPLSLAERKLRAFVELKNGGFPSAKAKEFQNALWYGMFNFITGPRRCAHPIKTLQKHQWTDIRNLPYIDPY 131
            + V+   +L+   D    PV++ G  ET +    RK RA+++L  GGF SA A+  Q +LWY +F F+TGPRRC   I T+    +     + ++ PY
Sbjct:  119 EIVVTPALLHAANDIAALPVNEIGTHETIVCKVTRKSRAWIKLSAGGFGSANARAIQESLWYNLFQFMTGPRRCTAAILTIPSSDFHKPEIMRFLAPY 216          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig7.14646.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5KQ06_9PHAE8.340e-4945.54Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KMT9_9PHAE1.730e-2542.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KF40_9PHAE5.680e-1935.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5R4_9PHAE1.250e-1734.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KR20_9PHAE1.420e-1536.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KHD1_9PHAE6.360e-1335.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig7contigC-linearis_contig7:4011857..4013250 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig7.14646.1mRNA_C-linearis_contig7.14646.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig7 4011723..4013366 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig7.14646.1 ID=prot_C-linearis_contig7.14646.1|Name=mRNA_C-linearis_contig7.14646.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=216bp
MLERVLAAHTKAAGAGTRVWHVFGGDKLIADFAQTVIVAVMLNCLCDAEH
WPVDKPGDMETPLSLAERKLRAFVELKNGGFPSAKAKEFQNALWYGMFNF
ITGPRRCAHPIKTLQKHQWTDIRNLPYIDPYADDGRTDLSPPEDTDASSP
EDTDVSPPDEENTNTDIFSREELLVRETPQNRGDVIIEASELESFLDNRQ
HGLERRGRRLARLYD*
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