prot_C-linearis_contig7.14642.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig7.14642.1
Unique Nameprot_C-linearis_contig7.14642.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length708
Homology
BLAST of mRNA_C-linearis_contig7.14642.1 vs. uniprot
Match: D7FTX4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTX4_ECTSI)

HSP 1 Score: 325 bits (833), Expect = 1.680e-101
Identity = 225/415 (54.22%), Postives = 258/415 (62.17%), Query Frame = 0
Query:  306 FEAPSTPGCYSPRIAMIGNQQQPPQRGFNDGTVPAPEGYSRPQQQQRELHRARSLPAEEGRCGE-----ANVISGGYDGVGMPSPRTGVVPQNQSFQAPVTMTVPLQEAPGQGLM--PPPATPPAGLRLQMCGAADAPMSAPVTPVMVYAYPHGYMMAYPPVNVQSVQTPRSARSQASKAWDPYECVSPSGESTQTGFGRRGKETRALSLESSPAASSSSRMSMSSRESLTKPDGDGQDDGALSQHHQGQRSRASSVLSDVIERGFYDDSDNAQQDGDENRPVAVXXXXXXXXXXXXXXXLSELQGNNTSKSGENGGSLNTPSRRARGISIASAGDVTSGDDKENS---GGFVG--KRRDDGSGKAV-EVDKQLSGQKRGGVAIEIEKQKSFTGSYFQVSPGSFLQSSKRQRHFA 707
            FEAP+TPG  SP + M+G + Q          +          QQ   L R  SLPAE+   GE     A   +G  DG    SPR GV PQ++SF AP+ M VPLQ    QG M  PPP  PPAGLRLQMCG  + PMSAPVTPVMVYA  HGYMMAYPPVNV SVQTPRS RSQASKAWDPYECVSPSGEST  GFGRRGKET  LS E SP A SS+ MS+SSR SL+K  G G DD +     QG RSRASSV+SDVIE G    +D+++Q+   ++P                  L  L+G    K+    GS  TP R       ++ G  T G+DKENS    GFVG  K+R+   G+AV E  KQLSGQKR G  I+IEKQKSFTGSYFQVSP SFLQSSKRQR+FA
Sbjct:    2 FEAPATPGLQSPSLTMVGGRDQ---------RLAQXXXXXXXWQQHPVLRRTHSLPAEDESGGEPVAAAAVASTGRLDGNDRASPRGGVAPQSRSFGAPLAMPVPLQAPRAQGCMQAPPPNAPPAGLRLQMCGLTNTPMSAPVTPVMVYAPGHGYMMAYPPVNVPSVQTPRSTRSQASKAWDPYECVSPSGESTHAGFGRRGKETPDLSPEGSPVALSSA-MSVSSRGSLSKQGGRGDDDAS-----QGLRSRASSVISDVIEGGVL--NDDSRQNKASSQPSLANPA------------LLPLEG----KTDNEDGSYKTPIRLRLSCETSAGGTATDGEDKENSQVGAGFVGGGKKRE---GEAVLEAKKQLSGQKRAGGDIDIEKQKSFTGSYFQVSPSSFLQSSKRQRNFA 380          
BLAST of mRNA_C-linearis_contig7.14642.1 vs. uniprot
Match: A0A6H5KL22_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL22_9PHAE)

HSP 1 Score: 108 bits (269), Expect = 1.340e-23
Identity = 87/191 (45.55%), Postives = 106/191 (55.50%), Query Frame = 0
Query:  520 MSMSSRESLTKPDGDGQDDGALSQHHQGQRSRASSVLSDVIERGFYDDSDNAQQDGDENRPVAVXXXXXXXXXXXXXXXLSELQGNNTSKSGENGGSLNTPSRRARGISIASAGDVTSGDDKENS---GGFVGKRRDDGSGKAVEVDKQLSGQKRGGVAIEIEKQKSFTGSYFQVSPGSFLQSSKRQRHFA 707
            MS+SSR SL+K    G DD +     QG RSRASSV+SDVIE G  +D D+ Q   +    +A+               L  L+G    K+    GS  TPSR       ++ G    G DKENS    G VG  +      A+E  KQ+SGQKR G   +IEKQKSFTGSYFQVSP SFL+SSKRQR+FA
Sbjct:    1 MSVSSRGSLSKQGARGDDDAS-----QGLRSRASSVISDVIEGGGLND-DSRQNKANSQPSLAIPA-------------LLPLEG----KTDNEDGSYKTPSRVRLSCETSAGGTAADGADKENSQVGAGLVGGGKKREGDAALEAKKQISGQKRTGG--DIEKQKSFTGSYFQVSPSSFLKSSKRQRNFA 166          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig7.14642.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FTX4_ECTSI1.680e-10154.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KL22_9PHAE1.340e-2345.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig7contigC-linearis_contig7:3974805..3981734 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig7.14642.1mRNA_C-linearis_contig7.14642.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig7 3974250..3981789 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig7.14642.1 ID=prot_C-linearis_contig7.14642.1|Name=mRNA_C-linearis_contig7.14642.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=708bp
MQSRQYAMHPNPSTRPVGVLNLSMPAPQHSRARSVAVPAAAPTASSSSGG
GGPRDELGENMVAGNVSYGHWNAGAAGRRTEQAPPGTNSARIARPFTAET
GGRGSTSPPLPDPPVSLAPPPPPPPPPPPVLSAAQQGHLKQLQQQRERFV
QHQHQHQQWQLESGGGAGRAMPTHGNGVQRADGELVLPSPSSRRRVELAD
RQPSPRGPPRQQRHWQSGPLHHHHPDVLSLPRYANAMPAAAPQCPSPVVK
VPIYSTLSEAIKHQHQHQHRQIRATPFVPPPPPPSLSSRASPGRHAARGR
TAAFTFEAPSTPGCYSPRIAMIGNQQQPPQRGFNDGTVPAPEGYSRPQQQ
QRELHRARSLPAEEGRCGEANVISGGYDGVGMPSPRTGVVPQNQSFQAPV
TMTVPLQEAPGQGLMPPPATPPAGLRLQMCGAADAPMSAPVTPVMVYAYP
HGYMMAYPPVNVQSVQTPRSARSQASKAWDPYECVSPSGESTQTGFGRRG
KETRALSLESSPAASSSSRMSMSSRESLTKPDGDGQDDGALSQHHQGQRS
RASSVLSDVIERGFYDDSDNAQQDGDENRPVAVAVAVASSAKPTLSLSLS
ELQGNNTSKSGENGGSLNTPSRRARGISIASAGDVTSGDDKENSGGFVGK
RRDDGSGKAVEVDKQLSGQKRGGVAIEIEKQKSFTGSYFQVSPGSFLQSS
KRQRHFA*
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