prot_C-linearis_contig7.14636.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig7.14636.1
Unique Nameprot_C-linearis_contig7.14636.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length337
Homology
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BLAST of mRNA_C-linearis_contig7.14636.1 vs. uniprot
Match: D7FTX5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTX5_ECTSI)

HSP 1 Score: 421 bits (1082), Expect = 6.230e-145
Identity = 224/336 (66.67%), Postives = 259/336 (77.08%), Query Frame = 0 
Query:    1 MYRDEASRDIDRKINNAQDSATELQALLHAWNMQSFNPTQTRQALQVVRRLEASHRKSVDGLLKEQDRQVAKARIQSIHYPGASDGFLKQSGRRGHGYGGAEDDPWGVSQGLAGSHAISCRRGCANRPNYSEEVPVTVVVMPKVGMGYPPREKLWRAFLAHRQLALGGSTLVCLAQLSEQSTYLLERRISIANLMIGAQQGGSVRLGGLRWGPEIRGIGQATEIAMQQRDTDLCLGLADNLEGLLGLQLDESADETGVNGVNRELLQDTNEMKSGSRAGPSLMLVNILAWLRLPPRSREGVTLKGLLGHQYFAPLRPGSIENDMPDAWKNFMGQEK 336
            MYRD+AS  I+ KI+NA +SA +LQALLHAWNM+SFN TQTRQAL+V+ RLE S RK V+GL KEQDRQVAK R+QSI YPGA +   K S    HGYGG +DDPW VSQGLAG  AISCRRG ANRPN +EE+PVTVV MPKV  GY  REKLWRAFLAHRQLALG   L C+AQLSEQST+ LERRIS ANLMIG +QG  +RLGGLRWG EI G+GQATE A+++RDTDLCLGLA+ LEGLLG    +  DETG    N     D+ E+ S ++   SLMLVN+L+WLRLP  SREG+TLKGLLGHQYFAPLR   +E+++P AWK  M Q K
Sbjct:    1 MYRDDASTGIESKISNAHESAKDLQALLHAWNMESFNHTQTRQALKVIHRLEMSRRKGVEGLRKEQDRQVAKLRVQSISYPGALNASRKHSAT--HGYGGTQDDPWEVSQGLAGREAISCRRGLANRPNSNEELPVTVVAMPKVETGYSAREKLWRAFLAHRQLALGRGALACVAQLSEQSTFTLERRISTANLMIG-EQGCVLRLGGLRWGAEIHGVGQATETALRRRDTDLCLGLAETLEGLLGFGRSKDDDETGAEDNNPA---DSKELGSNTQDKMSLMLVNVLSWLRLPAGSREGITLKGLLGHQYFAPLRHTDVESEIPSAWKTLMDQGK 330
[Close]
BLAST of mRNA_C-linearis_contig7.14636.1 vs. uniprot
Match: A0A6H5KMA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMA3_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 2.740e-22
Identity = 53/94 (56.38%), Postives = 66/94 (70.21%), Query Frame = 0 
Query:  243 GLLGLQLDESADETGVNGVNRELLQDTNEMKSGSRAGPSLMLVNILAWLRLPPRSREGVTLKGLLGHQYFAPLRPGSIENDMPDAWKNFMGQEK 336
            GLLGL   +  DETG  G N     D+ E+ S ++   SLMLVN+L+WLRLP  SREG++LKGLLGHQYFAPLR   IE+++P AW+ FM Q K
Sbjct:   48 GLLGLGRSKD-DETGAEGNNPA---DSKELGSNAQDKMSLMLVNVLSWLRLPAGSREGISLKGLLGHQYFAPLRHTDIESEIPSAWRTFMDQGK 137
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig7.14636.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FTX5_ECTSI6.230e-14566.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KMA3_9PHAE2.740e-2256.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig7contigC-linearis_contig7:3896173..3901586 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig7.14636.1mRNA_C-linearis_contig7.14636.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig7 3896173..3901586 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig7.14636.1 ID=prot_C-linearis_contig7.14636.1|Name=mRNA_C-linearis_contig7.14636.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=337bp
MYRDEASRDIDRKINNAQDSATELQALLHAWNMQSFNPTQTRQALQVVRR
LEASHRKSVDGLLKEQDRQVAKARIQSIHYPGASDGFLKQSGRRGHGYGG
AEDDPWGVSQGLAGSHAISCRRGCANRPNYSEEVPVTVVVMPKVGMGYPP
REKLWRAFLAHRQLALGGSTLVCLAQLSEQSTYLLERRISIANLMIGAQQ
GGSVRLGGLRWGPEIRGIGQATEIAMQQRDTDLCLGLADNLEGLLGLQLD
ESADETGVNGVNRELLQDTNEMKSGSRAGPSLMLVNILAWLRLPPRSREG
VTLKGLLGHQYFAPLRPGSIENDMPDAWKNFMGQEK*
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