prot_C-linearis_contig7.14633.1 (polypeptide) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig7.14633.1 vs. uniprot
Match: A0A6H5KK30_9PHAE (RNase NYN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK30_9PHAE) HSP 1 Score: 112 bits (279), Expect = 4.740e-24 Identity = 97/226 (42.92%), Postives = 120/226 (53.10%), Query Frame = 0
Query: 65 SKPKRSRDDEEPAEDLLSGASTTTSHDFGVQHTPSFADPVGVGG------RMGGHGSGPRSKKNKATLSESKPAQKLVATRSRFKIVHHHAIP-QEGKIVVATRGQSSHPGPSAAGEDGRATNASTXXXXXXXXXXGIESNLSGSSHGRAPLP-AKPSARAAANKTPAGSALSVVIDGSEAAFSHREAKGGWSAMGPLLAIQFFEERGVDCVAFLPRQRVDSIAPQ 282
S+PKR R+ EEP D AS G Q P G+GG R P +KKNK LS+S P + LVATR+RF+IVHHH P Q+ + +VA R S P + AGE R T+ S GSS R PL A S+R + + TP VVIDG++ A HR A G WSA G LLAIQFFE RGV CVAFLPR+R+ ++P+
Sbjct: 525 SRPKRGRE-EEPGMDSTGSASRARGGASGRQ-------PSGLGGLLDVIRRTASMNLQPPAKKNKVALSKSSPPKNLVATRARFQIVHHHDAPKQQQQQLVAHR--SKLPTLNTAGE-ARGTSKSK-----------------GSS--RVPLAGAALSSRPSRSTTP----KKVVIDGNDVALCHRGAHGQWSAQGALLAIQFFERRGVPCVAFLPRERMAGVSPR 716
BLAST of mRNA_C-linearis_contig7.14633.1 vs. uniprot
Match: D7FTX8_ECTSI (RNase NYN domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTX8_ECTSI) HSP 1 Score: 111 bits (277), Expect = 8.480e-24 Identity = 96/238 (40.34%), Postives = 120/238 (50.42%), Query Frame = 0
Query: 65 SKPKRSRDDEEPAEDLLSGASTTTSHDFGVQHTPSFADPVGVGG------RMGGHGSGPRSKKNKATLSESKPA-------------QKLVATRSRFKIVHHHAIPQEGKIVVATRGQSSHPGPSAAGEDGRATNASTXXXXXXXXXXGIESNLSGSSHGRAPLP-AKPSARAAANKTPAGSALSVVIDGSEAAFSHREAKGGWSAMGPLLAIQFFEERGVDCVAFLPRQRVDSIAPQ 282
S+PKR R+ EEP S + G Q P G+GG R P +KKNK LS+S P Q LVATR+RF+IVHHH P++ + +VA R S P + AGE R S GSS RAPL A S+R + + TP VVIDG++ A HR A G WSA GPLLAIQFFE+RGV CVAFLPR+R+ ++P+
Sbjct: 525 SRPKRGRE-EEPGMASTGSVSRARGGESGRQ-------PAGLGGLLDVIRRTASMNLQPPAKKNKVALSKSSPPKFSASVPRTALSLQNLVATRARFQIVHHHDAPKQQQQLVAHR--SKLPTLNTAGEARRT------------------SKSKGSS--RAPLAGAALSSRPSRSTTP----KKVVIDGNDVALCHRGADGQWSAQGPLLAIQFFEQRGVPCVAFLPRERMAGVSPR 728
BLAST of mRNA_C-linearis_contig7.14633.1 vs. uniprot
Match: D7FTY5_ECTSI (RNase NYN domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTY5_ECTSI) HSP 1 Score: 95.1 bits (235), Expect = 2.910e-18 Identity = 88/273 (32.23%), Postives = 127/273 (46.52%), Query Frame = 0
Query: 20 IPGAAPRRTLTLNSATGGEGHATGRAGFR-QATSTT---GGGSEPSDMSSKPKRSRDDEEPAEDLLSGASTTTSHDFGVQHTPSFADPVGVGGRMGGHGSGPRSKKNKATLSESKPAQKLVATRSRFKIVHHHAIPQEGKIVVATRGQSSHPGPSAAGEDGRATNASTXXXXXXXXXXGIESNLSGSSHGRAPLPAKPSARAAANKTPAGSALS------VVIDGSEAAFSHREAKGGWSAMGPLLAIQFFEERGVDCVAFLPRQRVDSIAPQ 282
+ G AP T+ N G F Q S T GGGS PS +PKR+R++E ++ + + Q + + + + RM G KK K+TL S+ + L+ATR+RF+I+HHHA+P + ++V+ + A+G G AT ++ RAPL KPS + VVIDG++ A ++ WSA+ PLLAIQFF+ERGV CVAFLPR+RV + PQ
Sbjct: 455 LAGPAPAATVKSNHRAPKNGWVAAVGAFHGQGASKTVWAGGGSGPS----RPKRNREEELTTAEITTRLRDPSKAPGQQQQQQTPDEMIDMVRRMASMGVATVPKKKKSTLDASREPKALIATRARFRIIHHHALPSQQQLVLYKPPTFN----IASGRSG-ATRSNQSSWVPPP---------------RAPLAIKPSTWTTPKQPXXXXXXXXXXSPLVVIDGTDIALTYWRTDDRWSALQPLLAIQFFKERGVPCVAFLPRERVYGVTPQ 703
BLAST of mRNA_C-linearis_contig7.14633.1 vs. uniprot
Match: A0A6H5KJR8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJR8_9PHAE) HSP 1 Score: 82.0 bits (201), Expect = 7.920e-14 Identity = 57/148 (38.51%), Postives = 80/148 (54.05%), Query Frame = 0
Query: 135 LVATRSRFKIVHHHAIPQEGKIVVATRGQSSHPGPSAAGEDGRATNASTXXXXXXXXXXGIESNLSGSSHGRAPLPAKPSARAAANKTPAGSALSVVIDGSEAAFSHREAKGGWSAMGPLLAIQFFEERGVDCVAFLPRQRVDSIAPQ 282
L+ATR+RF+I+HHHA+P + ++V+ S+ A+G G AT ++ S RAPL KPS + VV+DG++ A ++ WSA+ PLLAIQFF+E GV CVAFLPR+RV S+ Q
Sbjct: 531 LIATRARFRIIHHHALPSQQQLVLYDPPTSN----IASGRSG-ATRSN---------------QSSWGPPARAPLAIKPSTWTTPKPXXXXXSPLVVLDGTDIALTYWRTDDRWSALQPLLAIQFFKEWGVPCVAFLPRERVCSVTLQ 658 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig7.14633.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 4
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_C-linearis_contig7.14633.1 ID=prot_C-linearis_contig7.14633.1|Name=mRNA_C-linearis_contig7.14633.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=283bpback to top |