prot_C-linearis_contig7.14604.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig7.14604.1
Unique Nameprot_C-linearis_contig7.14604.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length124
Homology
BLAST of mRNA_C-linearis_contig7.14604.1 vs. uniprot
Match: D8LSC5_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC5_ECTSI)

HSP 1 Score: 85.9 bits (211), Expect = 4.990e-18
Identity = 48/87 (55.17%), Postives = 59/87 (67.82%), Query Frame = 0
Query:   23 PRIVHMLIDAGADATSAVTTR----AHEPDGTPLDFVNRFIREKKMDGEDATEEQLHKLGAIRRLLLRMESVHAASQLWQSH-PSVV 104
            PRIV +L+DAGAD TS V         E + TPL      +REK +DG+ ATEEQLH+L AIRRLLLR+++VHA S LW S  PS+V
Sbjct:   78 PRIVRLLVDAGADTTSTVRVTNLNGGVEYNDTPLAVTTSLLREKVVDGKPATEEQLHRLQAIRRLLLRVDAVHAVSWLWPSDAPSIV 164          
BLAST of mRNA_C-linearis_contig7.14604.1 vs. uniprot
Match: D7FVU0_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU0_ECTSI)

HSP 1 Score: 77.4 bits (189), Expect = 3.280e-14
Identity = 46/87 (52.87%), Postives = 55/87 (63.22%), Query Frame = 0
Query:   23 PRIVHMLIDAGADATSAVTTRAHEPD----GTPLDFVNRFIREKKMD-GEDATEEQLHKLGAIRRLLLRMESVHAASQLWQSHPSVV 104
            PRIV +LI+AGAD TS +     E +    GTPL     ++ EK +D GE ATEE L +L AIRRLLLR E+VHA S LW S  S V
Sbjct:  286 PRIVRLLINAGADTTSVIRGTNSEGEVQCNGTPLALTTSYLWEKILDNGEPATEEHLQRLEAIRRLLLRAEAVHAVSWLWPSDASFV 372          
BLAST of mRNA_C-linearis_contig7.14604.1 vs. uniprot
Match: D8LL76_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL76_ECTSI)

HSP 1 Score: 76.3 bits (186), Expect = 9.580e-14
Identity = 47/101 (46.53%), Postives = 60/101 (59.41%), Query Frame = 0
Query:   23 PRIVHMLIDAGADATSAVTTRAHEPDG-------TPLDFVNRFIREKKMDGEDATEEQLHKLGAIRRLLLRMESVHAASQLWQSH---PSVVFQRRTETTS 113
            PR+V +L+DAGADAT AV      PDG       TPLD   R + EK +D + AT +QL  L A RRLLL++E VHA S LW  H   P+   ++R +T S
Sbjct:  298 PRVVRLLVDAGADATLAVRV----PDGFGRSTKYTPLDCATRCLAEKVVDEDFATAQQLRNLRASRRLLLQVEVVHATSWLWGGHAGCPAAPGKKRAQTES 394          
BLAST of mRNA_C-linearis_contig7.14604.1 vs. uniprot
Match: D7G1H7_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1H7_ECTSI)

HSP 1 Score: 74.3 bits (181), Expect = 4.660e-13
Identity = 47/101 (46.53%), Postives = 60/101 (59.41%), Query Frame = 0
Query:   23 PRIVHMLIDAGADATSAV-----TTRAHEPDGTPLDFVNRFIREKKMDGEDATEEQLHKLGAIRRLLLRMESVHAASQLWQS-HPSVVFQR----RTETTS 113
            P+IV +L+DAGA+ T AV     T R  +   TPL F  R +RE ++DGE AT+EQL +L   R LL R E+VHA S LW S  P  + Q     +TET S
Sbjct:  301 PKIVRLLVDAGANTTRAVGVTRITPRWEKTSETPLAFTTRLLREGRVDGEAATKEQLQRLKDTRCLLSRAEAVHAVSWLWASGEPPRIAQAAGDTKTETAS 401          
BLAST of mRNA_C-linearis_contig7.14604.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 1.190e-12
Identity = 47/107 (43.93%), Postives = 62/107 (57.94%), Query Frame = 0
Query:   23 PRIVHMLIDAGADATSAVTTR----AHEPDGTPLDFVNRFIREK-KMDGED-ATEEQLHKLGAIRRLLLRMESVHAASQLWQSHPSVVFQRRTETTSRERDLWHAVS 123
            PR+V +L++AGAD TS V  R      +   TPL      +R+K K+ G   A+ EQLHKL AIRRLLLR+E+VHA S LW S  S + +     T R   +  AV+
Sbjct:  302 PRVVRLLVEAGADTTSPVAVRNQLGGDDVSITPLGLTMNPVRDKVKVVGRGPASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDISTITRAAARGTDRTTAISTAVT 408          
BLAST of mRNA_C-linearis_contig7.14604.1 vs. uniprot
Match: D7G1U9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U9_ECTSI)

HSP 1 Score: 72.8 bits (177), Expect = 1.640e-12
Identity = 42/81 (51.85%), Postives = 52/81 (64.20%), Query Frame = 0
Query:   23 PRIVHMLIDAGADATSAV-TTRAHE---PDGTPLDFVNRFIREKKMDGEDATEEQLHKLGAIRRLLLRMESVHAASQLWQS 99
            PRI   LID GAD  S V  TR+ E      TPL F  R +R+ K+ G++ATEEQL  L AI RLL ++E+VHA S LW+S
Sbjct:  296 PRIARFLIDDGADTKSTVLVTRSGEWTTSRDTPLGFATRSLRQNKVGGKNATEEQLRSLKAIHRLLSQIEAVHAVSWLWRS 376          
BLAST of mRNA_C-linearis_contig7.14604.1 vs. uniprot
Match: D7G1Y3_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1Y3_ECTSI)

HSP 1 Score: 69.7 bits (169), Expect = 1.840e-11
Identity = 41/83 (49.40%), Postives = 54/83 (65.06%), Query Frame = 0
Query:   23 PRIVHMLIDAGADATSAVTTRAHEPDG------TPLDFVNRFIREKKMDGEDATEEQLHKLGAIRRLLLRMESVHAASQLWQS 99
            PRIV +L+D+GAD  SAV  R    DG      TPL    R +R+ + +G+D  EEQL +L A+RRLLLR+E+VHA S +W S
Sbjct:  244 PRIVRLLVDSGADTESAV--RYTYRDGLVGFSDTPLCRTIRILRDVETEGKDDKEEQLGRLEAVRRLLLRVEAVHATSWVWPS 324          
BLAST of mRNA_C-linearis_contig7.14604.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI)

HSP 1 Score: 69.3 bits (168), Expect = 2.840e-11
Identity = 47/102 (46.08%), Postives = 61/102 (59.80%), Query Frame = 0
Query:   15 GCITHRPLPRIVHMLIDAGADATSAVTTRAHEP----DGTPLDFVNRFIREKKM-DGEDATEEQLHKLGAIRRLLLRMESVHAASQLWQSHPSVVFQRRTET 111
            GC +  P  RIV ML+DAGAD TS V     +     + TPL F    +R+K + DG+ AT+E L +L AI RLLLR+++VHA S LW S    +  R TET
Sbjct:  392 GCFSQAP--RIVRMLVDAGADTTSPVQVMNLKGGVVFNDTPLAFTKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGAPFIG-RATET 490          
BLAST of mRNA_C-linearis_contig7.14604.1 vs. uniprot
Match: D7FSU4_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSU4_ECTSI)

HSP 1 Score: 68.2 bits (165), Expect = 4.330e-11
Identity = 43/97 (44.33%), Postives = 53/97 (54.64%), Query Frame = 0
Query:   23 PRIVHMLIDAGADATSAVTTRAH--EPDGTPLDFVNRFIREKKMDGEDA---TEEQLHKLGAIRRLLLRMESVHAASQLWQSHPSVVFQRRTETTSR 114
            PR+  +L++AGAD TSAV    H  +   TPL    R +     DG      TEEQL KL AIRRLLLR+E+VHA S LW +  S +       T R
Sbjct:  165 PRVGQLLVEAGADTTSAVPVSKHFGKDSVTPLGLTMRLL-----DGRSTYPLTEEQLKKLKAIRRLLLRVEAVHAVSWLWSTDISTITHSTAHGTDR 256          
BLAST of mRNA_C-linearis_contig7.14604.1 vs. uniprot
Match: D7FVU3_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU3_ECTSI)

HSP 1 Score: 67.4 bits (163), Expect = 1.240e-10
Identity = 38/81 (46.91%), Postives = 50/81 (61.73%), Query Frame = 0
Query:   23 PRIVHMLIDAGADATSAVTTRAHEP----DGTPLDFVNRFIREKKMDGEDATEEQLHKLGAIRRLLLRMESVHAASQLWQS 99
            PRI   L+DAGAD TSAV  RA       + TPL++VN +   +      AT+EQL +L A RR+LLR+ +VHA S +W S
Sbjct:  276 PRITRRLVDAGADTTSAVQLRAKRSRTCVNVTPLEYVNDWALRETNGDHPATDEQLLRLEATRRVLLRVVAVHAVSWIWPS 356          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig7.14604.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D8LSC5_ECTSI4.990e-1855.17EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7FVU0_ECTSI3.280e-1452.87EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D8LL76_ECTSI9.580e-1446.53EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7G1H7_ECTSI4.660e-1346.53EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1... [more]
A0A6H5KJA9_9PHAE1.190e-1243.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1U9_ECTSI1.640e-1251.85EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7G1Y3_ECTSI1.840e-1149.40EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1... [more]
D7FT11_ECTSI2.840e-1146.08EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D7FSU4_ECTSI4.330e-1144.33EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7FVU3_ECTSI1.240e-1046.91EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig7contigC-linearis_contig7:3685648..3686019 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig7.14604.1mRNA_C-linearis_contig7.14604.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig7 3685038..3686631 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig7.14604.1 ID=prot_C-linearis_contig7.14604.1|Name=mRNA_C-linearis_contig7.14604.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=124bp
MGHDLIGTSLLLAIGCITHRPLPRIVHMLIDAGADATSAVTTRAHEPDGT
PLDFVNRFIREKKMDGEDATEEQLHKLGAIRRLLLRMESVHAASQLWQSH
PSVVFQRRTETTSRERDLWHAVS*
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