prot_C-linearis_contig7.14593.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig7.14593.1
Unique Nameprot_C-linearis_contig7.14593.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length969
Homology
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BLAST of mRNA_C-linearis_contig7.14593.1 vs. uniprot
Match: A0A6H5L3L6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3L6_9PHAE)

HSP 1 Score: 172 bits (435), Expect = 4.320e-40
Identity = 193/522 (36.97%), Postives = 245/522 (46.93%), Query Frame = 0 
Query:    1 MYRVSREGRRASAHEHDPDS----RQARYTDKDKKRF---------------DDKNKRAAPVAV-GAGVLPARKPGVVLCLKATVALVVLFFVRGMHRSMCPADAQTPEAAGMQKYILNLDQRLEAEREARKSAEDAMEDLRAQDRGHAGMPRAPGPADGRQGRAEAEAVRAELNEGRGDYHDSGRFDDMDQDGRR---LPKGDVENLLEEKTQVLAETLKELEDLEAKNTELLDKVTALEQQLDTRRNLAINAGHG------------------------GKPTTAKVKHHFGRGPGFPSRPA----DGSKKN-----------AAGGEA-REFYVNPDDKYEGHPSNGLGDPFESMGGWIMDEVDKKEELLEDDALNWDADGDVGGG---------SDALADFKVEPVATSDGDRHDEQHPASRDTPSSPSSAPS--------EAVVDAELVAAGGLADSADHESGFGD----LALDKIENALG-GQGWQVEEGVDWGKVA-AERGSGNRPAASWDEQQE 436
            MYRVSREGRRA  H+H PDS    R ARY    K+R                DDK+K A PVA   AGVL  R     LCLK T   V LF +RG+HRSMCPA   + EA  +Q  I  LDQ+LE ER +RK+AE AMEDLRA DRG AGMP + G +D RQ R                 H+S     +  +G+    + K D + LL E  + L E ++EL+ L AKN +L +KV +LE+Q+++RR LA+   HG                        GKP+T  VKH FG G    S  A    DG   N           A GG   R FY NP D YEGH SN  G PFE + GWI   V+ +E      + ++DA G + G          SD LA+     VA  DG+ H+     + D     + AP           V D E+              G  D    L L  + NALG G  ++V EGVDW ++   +   G R  ASWD + +
Sbjct:    1 MYRVSREGRRA--HDHGPDSNGGGRSARYN---KERVVDAASSSGSSSYAYSDDKSK-AFPVAGRAAGVLRTRSSRASLCLKLTATSVGLFVLRGVHRSMCPAGGGSREAE-LQSRIAFLDQKLEVERASRKTAEHAMEDLRANDRGRAGMPGS-GGSDERQQRGAEXXXXXXXXXXXAASHESEPLAHVAGEGQPNTVVTKSDYQTLLRETYEDLQERIEELQILTAKNKDLQEKVASLEEQVESRRQLALGV-HGAEGVGGSYHQQQEQQQWPEAEHDSGKPST--VKHRFGVGNFQHSDMAIFANDGISNNXXXXXXXXXGGARGGTGKRTFYENPYDAYEGHQSNEPGVPFE-VKGWI---VEGEEGGXXXXSADFDAGGSMDGNXXXXXXGEHSDPLANMDTGAVAAGDGNIHEV---GNFDAGGHDNEAPPIIVGGLRVGGVGDGEVXLXXXXXXXXXXXXGVSDFRDGLPLSDVGNALGNGVEFEVAEGVDWARIRDPDNEDGRRGTASWDPKND 504
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig7.14593.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L3L6_9PHAE4.320e-4036.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 849..869
NoneNo IPR availableCOILSCoilCoilcoord: 687..711
NoneNo IPR availableCOILSCoilCoilcoord: 183..220
NoneNo IPR availableCOILSCoilCoilcoord: 97..124
NoneNo IPR availableCOILSCoilCoilcoord: 726..812
NoneNo IPR availableCOILSCoilCoilcoord: 815..839
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 74..968
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 56..73
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig7contigC-linearis_contig7:3573687..3580403 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig7.14593.1mRNA_C-linearis_contig7.14593.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig7 3572454..3580505 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig7.14593.1 ID=prot_C-linearis_contig7.14593.1|Name=mRNA_C-linearis_contig7.14593.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=969bp
MYRVSREGRRASAHEHDPDSRQARYTDKDKKRFDDKNKRAAPVAVGAGVL
PARKPGVVLCLKATVALVVLFFVRGMHRSMCPADAQTPEAAGMQKYILNL
DQRLEAEREARKSAEDAMEDLRAQDRGHAGMPRAPGPADGRQGRAEAEAV
RAELNEGRGDYHDSGRFDDMDQDGRRLPKGDVENLLEEKTQVLAETLKEL
EDLEAKNTELLDKVTALEQQLDTRRNLAINAGHGGKPTTAKVKHHFGRGP
GFPSRPADGSKKNAAGGEAREFYVNPDDKYEGHPSNGLGDPFESMGGWIM
DEVDKKEELLEDDALNWDADGDVGGGSDALADFKVEPVATSDGDRHDEQH
PASRDTPSSPSSAPSEAVVDAELVAAGGLADSADHESGFGDLALDKIENA
LGGQGWQVEEGVDWGKVAAERGSGNRPAASWDEQQEGSGEGAGMGGNGRG
WPAAREDRKSGKDHRFYQSKLPREEKLPRKPFLKGRAEKVEAGLGQEVGD
ATGADRGQSKDGERNADHPGGPSLAPDRSGDGNHPNTTAAAAGSEKKLPT
THAPATAGEAPQAQEPSEGGSREPASPNQEKAPSRRTVDIKAAIAEDRAA
LGKSNPLPGEEAPPAAVGGDGSEDEAVGEGGGRGGGGGGGPMPPSFPKAP
GREELSEPERVAREGNLERLAFWNAEGMLAQVEEMAMAKTKELLEEAGQQ
QQQQQQQQQKQEPPAPREAPETAEEVADGNETLETEKEGRERLEQERLEQ
EEAGKKEAQRLAREAAERAEDLKQELLREQAEKREAAEEARLEAEKREAD
EEARREADGEEERALREATANAANAAEEVKAAADALEAKAVADAAAKEGR
AHREKKEAEERQKEDLKKRDEGRRAKKEAALSELVMGNGKPRTKRGGGGG
GGGGRLGSSQQEESPPGTQEEEQARAQRQPQAQEVASRHRRRRHGELVQG
AGATERAGQPGRRVYGRR*
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