prot_C-linearis_contig7.14581.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig7.14581.1
Unique Nameprot_C-linearis_contig7.14581.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length166
Homology
BLAST of mRNA_C-linearis_contig7.14581.1 vs. uniprot
Match: D7FXF0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXF0_ECTSI)

HSP 1 Score: 184 bits (468), Expect = 5.260e-57
Identity = 108/153 (70.59%), Postives = 117/153 (76.47%), Query Frame = 0
Query:    4 VADAPSIGVTAAAPAPA-QGLETPGEPVEPYYWEEGGNPNVDWWAKIRHSLHFGGVKAVEGAEAVGEVVANTLGLNDSAYQYVIDALEMDEIRAKREQRDEEDRQKMALEAEAATSRERQENEDGEANLDAGAIELGDTRLSLPGSNEDGDTA 155
            VADAP+I V AAAP  A  G E  G+PVEPY+WEEGGNPNVDWWAK+RHSLHFGGVKAV GAEAVGEVVANTLGLNDS YQYVIDALE DEIR K      EDR++MALE EAA          GE   D+GAIELGDTRLSLP S+  G+TA
Sbjct:    3 VADAPAIEVAAAAPVQAIDGQE--GDPVEPYFWEEGGNPNVDWWAKVRHSLHFGGVKAVAGAEAVGEVVANTLGLNDSKYQYVIDALEADEIREKXXXXXXEDRRQMALEEEAAKXXXXXXXXXGEVKQDSGAIELGDTRLSLPDSS--GETA 151          
BLAST of mRNA_C-linearis_contig7.14581.1 vs. uniprot
Match: A0A5A8E207_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E207_CAFRO)

HSP 1 Score: 63.2 bits (152), Expect = 3.580e-9
Identity = 29/59 (49.15%), Postives = 39/59 (66.10%), Query Frame = 0
Query:   32 PYYWEEGGNPNVDWWAKIRHSLHFGGVKAVEGAEAVGEVVANTLGLNDSAYQYVIDALE 90
            PYYWE GG+ +V     + H+LHF G  A+ G ++VG V+A+TLGL  S YQ+ ID  E
Sbjct:   39 PYYWEAGGDADVSTATALAHNLHFWGSLALAGVDSVGSVLASTLGLTQSRYQFEIDYAE 97          
BLAST of mRNA_C-linearis_contig7.14581.1 vs. uniprot
Match: A0A7S2RVN4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RVN4_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 3.240e-8
Identity = 32/68 (47.06%), Postives = 41/68 (60.29%), Query Frame = 0
Query:   32 PYYWEEGGNPNVDWWAKIRHSLHFGGVKAVEGAEAVGEVVANTLGLNDSAYQYVIDALEMDEIRAKRE 99
            PYYWE     +V  W K  H   + G +   G E VGEVVA+ LGLN+S YQ+VIDA E ++ R + E
Sbjct:   51 PYYWELVDVQDVPAWQKAWHISRWTGERVFRGMEFVGEVVADILGLNESRYQWVIDAAENEKARLRME 118          
BLAST of mRNA_C-linearis_contig7.14581.1 vs. uniprot
Match: A0A7S2V0M7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0M7_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 7.020e-8
Identity = 29/63 (46.03%), Postives = 41/63 (65.08%), Query Frame = 0
Query:   32 PYYWEEGGNPN--VDWWAKIRHSLHFGGVKAVEGAEAVGEVVANTLGLNDSAYQYVIDALEMD 92
            PYYWEE  + +  +    ++ H+ ++   K V+G E  GE VA+ LGLN S YQYVIDA+E+D
Sbjct:   49 PYYWEEPSSTDNPLPLGRRVFHNFYWAAEKIVDGMEFAGECVAHMLGLNQSQYQYVIDAMEID 111          
BLAST of mRNA_C-linearis_contig7.14581.1 vs. uniprot
Match: A0A7S2NT86_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NT86_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 9.800e-7
Identity = 30/61 (49.18%), Postives = 37/61 (60.66%), Query Frame = 0
Query:   33 YYWEEGGNPNVDWWAKIRHSLHFGGVKAVEGAEAVGEVVANTLGLNDSAYQYVIDALEMDE 93
            Y+WE G N ++ W  K+ H       K V+ AEA GEVVANTLGLN S Y YV D +  +E
Sbjct:   82 YFWETGNN-DLSWKVKLWHRTVAVLGKGVKNAEAAGEVVANTLGLNGSRYDYVYDTMTPEE 141          
BLAST of mRNA_C-linearis_contig7.14581.1 vs. uniprot
Match: A0A7S2CUC7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CUC7_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 1.170e-6
Identity = 35/82 (42.68%), Postives = 49/82 (59.76%), Query Frame = 0
Query:   32 PYYWE-EGGNPNVDWWAKIRHSLHFGGVKAVEGAEAVGEVVANTLGLNDSAYQYVIDALEMDEIRAKREQRDEEDRQKMALE 112
            PYYW+  G NP +    K  H   + G K   G E +G +VA+  G+N S YQYVIDA++ DE R +R++R E +R  +A E
Sbjct:   43 PYYWQLVGYNPPLH--RKASHIAWWFGSKVFYGMEFIGAIVADLAGMNQSKYQYVIDAMKEDERREQRKKRIESERAMLAEE 122          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig7.14581.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FXF0_ECTSI5.260e-5770.59Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A5A8E207_CAFRO3.580e-949.15Uncharacterized protein n=2 Tax=Cafeteria roenberg... [more]
A0A7S2RVN4_9STRA3.240e-847.06Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S2V0M7_9STRA7.020e-846.03Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S2NT86_9STRA9.800e-749.18Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2CUC7_9STRA1.170e-642.68Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 94..121
IPR028260FAM177 familyPFAMPF14774FAM177coord: 42..104
e-value: 9.8E-6
score: 25.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig7contigC-linearis_contig7:3504848..3507034 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig7.14581.1mRNA_C-linearis_contig7.14581.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig7 3504725..3507853 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig7.14581.1 ID=prot_C-linearis_contig7.14581.1|Name=mRNA_C-linearis_contig7.14581.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=166bp
MSLVADAPSIGVTAAAPAPAQGLETPGEPVEPYYWEEGGNPNVDWWAKIR
HSLHFGGVKAVEGAEAVGEVVANTLGLNDSAYQYVIDALEMDEIRAKREQ
RDEEDRQKMALEAEAATSRERQENEDGEANLDAGAIELGDTRLSLPGSNE
DGDTATLPAARSTTA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028260FAM177