prot_C-linearis_contig7.14545.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig7.14545.1
Unique Nameprot_C-linearis_contig7.14545.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length717
Homology
BLAST of mRNA_C-linearis_contig7.14545.1 vs. uniprot
Match: A0A6H5KHR5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHR5_9PHAE)

HSP 1 Score: 756 bits (1953), Expect = 9.640e-266
Identity = 444/618 (71.84%), Postives = 486/618 (78.64%), Query Frame = 0
Query:  108 DEEAGGTATGGVGC---GEVMMRAPKVPFCRAGADVANMWMPVWDSDSQTMVTAKRVMVFGGKGVDYYNRRVDDELTYLSDMWALHITNTGFKWNKVTPHGKVQPSPRWQTGDSVAYGSSLVVYGGDDQTTNQVGGLGDLWVYSPRGARSRLHA---DDPYDVSAKNDNWAAYARGGMHPGERREPSLTMINSTLLLQGGRVDDGESNERCDSRFFLVDLADPDGIWREGPSFPGECGLGQTMDTVNFTRGHGGGKAGESQVRAVVFGGCKWDSDGMFVCSNDLYAYSLDENRWEEIIPKSDSDSYACAADDTEGEEGPPSLRPAPGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKKPVVCPGESTSRPLGRHAHASAYIESKADNVHALFIFGGRENMDDLTPLGDLWMFDFRTMRWSEITPGS-KHVPSNRFHHSLTVWQGGAGDGVASLVVFGGETITRTGQTVYMNDVWLYTPHTGAWREVSGSDCKEGATGIVGGTNWAPIVALVSLPVLVVVVQCLLHYICPIYHPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDGVK--RGKSAPSLVK-QGLLASSSSNPDKPSYQALA 715
            DE   G   GG      G  MM+ P VPFCRAGADVANMWMPVW+ DSQ + TAKRV+VFGG+GVDYYN+R DD+L+YLSDMWALHITNTGF+WNKV P G V PS RWQTGDSVAYG+SLVVYGGDDQTTNQ+GGLGDLWV+SP G RSRLHA   D  YD   +   W  Y+R G  PGERREPSLTM+NSTLLLQGG+V+DGESNERCDSRFFLVDL DP G WREGPSFPGECG+G TM+TVN T  H     GE++VRAVVFGGCK   DG+F CSNDLYAY L  NRWEEI+PKSD+D++AC ADDT GE   P+LRPA  +XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  KK  VCPG STSRPLGRHAHASAYIESK DN++ALFIFGGRENMD+LTPLGDLWMFDF TMRW EITP S K  P NRF+HSLTVWQGG GDGVASLVVFGGETITRTGQTV+MNDVWLYTP TGAWR+VS SDCKEGA+GI  G NW  ++AL S+ VLVVVVQC LH +CP Y PPXXXXXXXXXXXXXX                        E G +  R KS  SL    GLLASSSSNP+K SYQA+A
Sbjct:   75 DEAVEGEGDGGAAAVRGGSGMMQLPSVPFCRAGADVANMWMPVWNPDSQLVETAKRVVVFGGRGVDYYNKRADDQLSYLSDMWALHITNTGFRWNKVVPVGHVHPSARWQTGDSVAYGASLVVYGGDDQTTNQMGGLGDLWVFSPGGTRSRLHASEKDYSYDSLDRRSEWTEYSRAGKLPGERREPSLTMVNSTLLLQGGKVEDGESNERCDSRFFLVDLGDPQGKWREGPSFPGECGIGGTMNTVNITSKHT--TDGENEVRAVVFGGCKLAPDGVFSCSNDLYAYDLATNRWEEIVPKSDADAFACEADDT-GES--PALRPA--AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWDKKKAVCPGVSTSRPLGRHAHASAYIESKTDNMNALFIFGGRENMDELTPLGDLWMFDFTTMRWREITPDSNKPAPCNRFYHSLTVWQGGVGDGVASLVVFGGETITRTGQTVFMNDVWLYTPQTGAWRQVSRSDCKEGASGIARGGNWTALIALASMLVLVVVVQCFLHRVCPQYQPPXXXXXXXXXXXXXXGNATGGASAR--------------EGGAEATRSKSVSSLQDTHGLLASSSSNPEKHSYQAVA 671          
BLAST of mRNA_C-linearis_contig7.14545.1 vs. uniprot
Match: D7G1X6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1X6_ECTSI)

HSP 1 Score: 657 bits (1694), Expect = 1.540e-230
Identity = 325/477 (68.13%), Postives = 358/477 (75.05%), Query Frame = 0
Query:  125 MMRAPKVPFCRAGADVANMWMPVWDSDSQTMVTAKRVMVFGGKGVDYYNRRVDDELTYLSDMWALHITNTGFKWNKVTPHGKVQPSPRWQTGDSVAYGSSLVVYGGDDQTTNQVGGLGDLWVYSPRGARSRLHA---DDPYDVSAKNDNWAAYARGGMHPGERREPSLTMINSTLLLQGGRVDDGESNERCDSRFFLVDLADPDGIWREGPSFPGECGLGQTMDTVNFTRGHGGGKAGESQVRAVVFGGCKWDSDGMFVCSNDLYAYSLDENRWEEIIPKSDSDSYACAADDTEGEEGPPSLRPAPGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKKPVVCPGESTSRPLGRHAHASAYIESKADNVHALFIFGGRENMDDLTPLGDLWMFDFRTMRWSEITPGSKH-VPSNRFHHSLTVWQGGAGDGVASLVVFGGETITRTGQTVYMNDVWLYTPHTGAWREVSGS 597
            MM+ P+VPFCRAGADVANMWMPVW+ DSQ + TAKRV+VFGG+GVDYY++R DD+L+YLSDMWALHITNTGF+WNKV P G+V+PS RWQTGDSVAYG+SLVVYGGDDQTTNQVGGLGDLWV+SPRG+RSRLHA   D  YD S +   W  Y R G  PGERREPSL M+NSTLLLQGG+++DGESNERCDSRFFLVDL DP G WREGPSFPGECG+G TMDTVN TR H     GE++VRAVVFGGCK   DG+F CSNDLYAY L  NRWEEI+PKSD+D++AC ADDT                                                          GES   P  RH HASAYIESK DN++ALFIFGGRENMDDLTPLGDLWMFDF TMRWSEITP SK   P NRF+HSLTVWQGG GDGVASLVVFGGETITRTGQTV+MNDVWLYTP TGAWREV  S
Sbjct:    1 MMQLPRVPFCRAGADVANMWMPVWNPDSQLVETAKRVVVFGGRGVDYYDKRADDQLSYLSDMWALHITNTGFRWNKVVPIGQVRPSARWQTGDSVAYGASLVVYGGDDQTTNQVGGLGDLWVFSPRGSRSRLHASEKDYSYDASDRRSEWTEYRRTGKLPGERREPSLAMVNSTLLLQGGKMEDGESNERCDSRFFLVDLGDPQGEWREGPSFPGECGIGGTMDTVNITRKHTAD--GENEVRAVVFGGCKLAPDGVFSCSNDLYAYDLATNRWEEIVPKSDADAFACEADDT----------------------------------------------------------GES---PALRHGHASAYIESKTDNMNALFIFGGRENMDDLTPLGDLWMFDFTTMRWSEITPDSKKPAPCNRFYHSLTVWQGGVGDGVASLVVFGGETITRTGQTVFMNDVWLYTPQTGAWREVRSS 414          
BLAST of mRNA_C-linearis_contig7.14545.1 vs. uniprot
Match: A0A835ZEU9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEU9_9STRA)

HSP 1 Score: 133 bits (334), Expect = 9.270e-29
Identity = 104/377 (27.59%), Postives = 147/377 (38.99%), Query Frame = 0
Query:  281 PGERREPSLTMINS-TLLLQGGRVDDGESNERCDSRFFLVDLADPDGIWREGPSFPGECGLGQTMDTV----NFTRGHGG----------------------------GKAGESQVRA-----------------VVFGGCKWDSDGMFVCSNDLYAYSLDENRWEEIIPKSDSDSYACAADDTEGEEGPPSLRPAPGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKKPVVCPGESTSRPLGRHAHASAYIESKADNVHALFIFGGRENMDDLTPLGDLWMFDFRTMRWSEITPGSKHVPSNRFHHSLTVWQGGAGDGVASLVVFGGETITRTGQTVYMNDVWLYTPHTGAWREVSGSDCKEGATGIV 607
            PG+RR   + + +   ++L  G+  +GE    CDS+ F  DL + +  W    S P  C  GQTM  V    N T    G                            G A +   RA                 V+FGG ++   G +   NDL+AY    + WE + P+ + + +  A++    E                                               ++           RP  R  H + Y+E     +H+LFI GGR   + +  L D+W F+F+T RW +    S   PS RF H LT W+G AGDG   L + GGE I  +G    +NDVWLY     AWR+V  SDC  GATGI+
Sbjct:  225 PGQRRGQGMAVSSGGVVVLASGK--NGEGELECDSKVFAFDLTEANATWATKTSLPAPCRWGQTMTRVITYPNTTTNSTGISGXXXXXXXXXXXXXXXXXXXXXAQPDGAAQKGAARALKASQKGEHPVHGTEKLVLFGGRRYQGSG-YKYFNDLWAYDPVTDTWELLTPEVEENMHGVASEADALET---------------------------------------------YEQAXXXXXXXQVPRP--RDHHGAVYVEE----LHSLFIHGGRWTDEMVPALDDIWSFNFKTRRWKQHAQVSTKRPSPRFGHGLTAWRGSAGDGSPGLALVGGEVINSSGHHDLLNDVWLYAIADSAWRKVGRSDCSPGATGII 547          
BLAST of mRNA_C-linearis_contig7.14545.1 vs. uniprot
Match: UPI00192F711E (multiple epidermal growth factor-like domains protein 8 n=1 Tax=Crotalus tigris TaxID=88082 RepID=UPI00192F711E)

HSP 1 Score: 63.9 bits (154), Expect = 1.200e-6
Identity = 44/129 (34.11%), Postives = 63/129 (48.84%), Query Frame = 0
Query:  482 RHAHASAYIESKADNVHALFIFGGRENMDDLTPLGDLWMFDFRTMRWSE--ITPGSKHVPSNRFHHSLTVWQGGAGDGVASLVVFGGETITRTGQTVYMNDVWLYTPHTGAWREVSGSDCKEGATGIVG 608
            R A A A++ S       L+IFGG   +D  T LGDL  ++F T  W +  ++P     P+ R  H+   W+G       SL++FGGE  T        NDVW+Y P  G WRE+   +  +   G+ G
Sbjct:  228 RTAAAGAFLPSTG----GLYIFGG---LDLNTALGDLVFYNFTTNTWHQRVLSPS----PTARHSHTAVAWEG-------SLILFGGELSTG----FLTNDVWMYLPREGYWRELVPVNTTKFPPGLAG 334          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig7.14545.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KHR5_9PHAE9.640e-26671.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1X6_ECTSI1.540e-23068.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZEU9_9STRA9.270e-2927.59Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
UPI00192F711E1.200e-634.11multiple epidermal growth factor-like domains prot... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015915Kelch-type beta propellerGENE3D2.120.10.80coord: 137..414
e-value: 6.2E-6
score: 27.2
IPR015915Kelch-type beta propellerGENE3D2.120.10.80coord: 468..616
e-value: 1.4E-12
score: 49.2
IPR015915Kelch-type beta propellerSUPERFAMILY117281Kelch motifcoord: 183..595
NoneNo IPR availablePFAMPF13418Kelch_4coord: 365..400
e-value: 3.1E-5
score: 23.9
coord: 499..533
e-value: 1.7E-4
score: 21.5
NoneNo IPR availablePANTHERPTHR23244KELCH REPEAT DOMAINcoord: 328..424
coord: 160..303
coord: 429..654
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 67..611
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..66
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..35
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 36..48
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 641..716
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 49..66
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 612..640
NoneNo IPR availableTMHMMTMhelixcoord: 616..638
NoneNo IPR availableTMHMMTMhelixcoord: 28..50

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig7contigC-linearis_contig7:3042669..3050592 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig7.14545.1mRNA_C-linearis_contig7.14545.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig7 3041697..3053250 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig7.14545.1 ID=prot_C-linearis_contig7.14545.1|Name=mRNA_C-linearis_contig7.14545.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=717bp
MKKRQRKPSSLLRDRDQERRHRQSRSSGGGGGSSGLVAGALALACALLAP
PRGSGPWTLFSATAAAAAATRLKTEAPISARSSSGGGGGGGGGGGAALAA
PPGEGAGDEEAGGTATGGVGCGEVMMRAPKVPFCRAGADVANMWMPVWDS
DSQTMVTAKRVMVFGGKGVDYYNRRVDDELTYLSDMWALHITNTGFKWNK
VTPHGKVQPSPRWQTGDSVAYGSSLVVYGGDDQTTNQVGGLGDLWVYSPR
GARSRLHADDPYDVSAKNDNWAAYARGGMHPGERREPSLTMINSTLLLQG
GRVDDGESNERCDSRFFLVDLADPDGIWREGPSFPGECGLGQTMDTVNFT
RGHGGGKAGESQVRAVVFGGCKWDSDGMFVCSNDLYAYSLDENRWEEIIP
KSDSDSYACAADDTEGEEGPPSLRPAPGSSSSSSSSSAAPIGSSNSSNSN
SSNEDGVGGGGGSGKKKPVVCPGESTSRPLGRHAHASAYIESKADNVHAL
FIFGGRENMDDLTPLGDLWMFDFRTMRWSEITPGSKHVPSNRFHHSLTVW
QGGAGDGVASLVVFGGETITRTGQTVYMNDVWLYTPHTGAWREVSGSDCK
EGATGIVGGTNWAPIVALVSLPVLVVVVQCLLHYICPIYHPPMRRRRRRR
RKTEDAATSGSALRGGEVKGVGGGGGGGAEEDGVKRGKSAPSLVKQGLLA
SSSSNPDKPSYQALAE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015915Kelch-typ_b-propeller