prot_C-linearis_contig7.14538.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig7.14538.1
Unique Nameprot_C-linearis_contig7.14538.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length137
Homology
BLAST of mRNA_C-linearis_contig7.14538.1 vs. uniprot
Match: A0A6H5KU65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU65_9PHAE)

HSP 1 Score: 101 bits (252), Expect = 4.240e-25
Identity = 61/137 (44.53%), Postives = 81/137 (59.12%), Query Frame = 0
Query:    2 SDALYNAAGVIGSLITAFSIVPQIVRVVQRRSSADISYTYQAVFITGIGFFLVYYGYYELWEVFLPTTLSAVIMLSLVGLKVHYEK--VSPSRTAAAATVGEEGAGGDSEPRRRGERSVRAKDADRTSEVQPLMSSW 136
            SD  YN  GV G LI A +  PQ+ RV++R+ SADISYT+  VF+ G+  FLVYYGYYELWE+F P+ +S   ++ L+  K+  E+  + P   AA A+V      GD      GER         +S+ QPLMSSW
Sbjct:    3 SDVPYNLMGVCGGLIVACAYAPQLARVIRRKQSADISYTHLMVFMGGMVMFLVYYGYYELWELFFPSLISMSFVILLLAAKIRMEEFPLRPRAAAAGASVAVGDTPGD------GERMTNT-----SSDAQPLMSSW 128          
BLAST of mRNA_C-linearis_contig7.14538.1 vs. uniprot
Match: D7G1V2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1V2_ECTSI)

HSP 1 Score: 98.6 bits (244), Expect = 6.320e-24
Identity = 48/99 (48.48%), Postives = 66/99 (66.67%), Query Frame = 0
Query:    1 MSDALYNAAGVIGSLITAFSIVPQIVRVVQRRSSADISYTYQAVFITGIGFFLVYYGYYELWEVFLPTTLSAVIMLSLVGLKVHYEKVSPSRTAAAATV 99
            MSD +Y+  G +G  + A S+VPQ+ RV  R+ +ADIS+TYQ VF+TGI  FLV+YGYYELWE+F P   S ++ + L  LK+  E+     TAAA + 
Sbjct:    1 MSDTVYDVMGFLGGCVMAASLVPQVYRVTVRKKAADISHTYQVVFVTGIVMFLVFYGYYELWELFFPALASMMLQIYLAVLKIRLERCPRRHTAAAPST 99          
BLAST of mRNA_C-linearis_contig7.14538.1 vs. uniprot
Match: A0A6H5K0Z2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0Z2_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 1.330e-16
Identity = 40/107 (37.38%), Postives = 66/107 (61.68%), Query Frame = 0
Query:    1 MSDALYNAAGVIGSLITAFSIVPQIVRVVQRRSSADISYTYQAVFITGIGFFLVYYGYYELWEVFLPTTLSAVIMLSLVGLKVHYEK------VSPSRTAAAATVGE 101
            + D ++NA G  G +I A ++VPQIV   +RRS+ DISY +QA+++TG+   ++YY ++ LW VF P  +    ++ L  LK+++EK      +S   T ++  VGE
Sbjct:    7 LDDQIFNAVGTTGGIILACALVPQIVLAHKRRSAEDISYMWQAIYVTGLATLMIYYVHFGLWAVFFPVAVECSCLIYLTALKMYFEKFASGDGISEKLTPSSHVVGE 113          
BLAST of mRNA_C-linearis_contig7.14538.1 vs. uniprot
Match: D8LCW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCW9_ECTSI)

HSP 1 Score: 66.6 bits (161), Expect = 1.390e-10
Identity = 31/81 (38.27%), Postives = 51/81 (62.96%), Query Frame = 0
Query:    6 YNAAGVIGSLITAFSIVPQIVRVVQRRSSADISYTYQAVFITGIGFFLVYYGYYELWEVFLPTTLSAVIMLSLVGLKVHYE 86
            +N  G +G ++ A +++PQI     R+S+ADISY +QAV+  G+   ++YY ++ LW VF P       ++ L GLK++YE
Sbjct:    8 FNIIGFVGGVVLATALLPQIYLAHSRKSTADISYLWQAVYTVGLLTLMIYYFHFRLWAVFYPMAFEFSSLMYLTGLKIYYE 88          
BLAST of mRNA_C-linearis_contig7.14538.1 vs. uniprot
Match: A0A662WU06_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WU06_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 5.990e-10
Identity = 28/95 (29.47%), Postives = 59/95 (62.11%), Query Frame = 0
Query:    1 MSDALYNAAGVIGSLITAFSIVPQIVRVVQRRSSADISYTYQAVFITGIGFFLVYYGYYELWEVFLPTTLSAVIMLSLVGLKVHYEKVSPSRTAA 95
            MS   +   G+IGS + + ++VPQ+ +V + +S+ DIS  +Q +++ G+G  L+Y     LW +++P T+  +  ++++ +K++Y++ S    AA
Sbjct:    1 MSSVAFKTVGLIGSFVISSALVPQMRKVYKTKSAKDISLLFQVLYVVGLGMILIYGFGESLWPIYIPATVEELAAVTMLCMKLYYDRRSTKMGAA 95          
BLAST of mRNA_C-linearis_contig7.14538.1 vs. uniprot
Match: A0A3R7J1S1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7J1S1_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 2.320e-8
Identity = 33/97 (34.02%), Postives = 59/97 (60.82%), Query Frame = 0
Query:    6 YNAAGVIGSLITAFSIVPQIVRVVQRRSSADISYTYQAVFITGIGFFLVYYGYYE-LWEVFLPTTLSAVIMLSLVGLKVHYE----KVSPSRTAAAA 97
            Y   G++GSL+ A S+VPQ+++V + +++ DIS T+Q  ++ G+   +V YG+   LW VF+P T+       L G+K++++    K   S+ A A+
Sbjct:    5 YQILGLVGSLLLAASLVPQMMKVYKTKTAKDISLTFQLTYLVGLSM-IVAYGFGRWLWPVFIPATIELFAAFVLFGMKIYFDWQNRKQDVSKAAGAS 100          
BLAST of mRNA_C-linearis_contig7.14538.1 vs. uniprot
Match: A0A3F2RW24_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RW24_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 3.810e-8
Identity = 33/97 (34.02%), Postives = 59/97 (60.82%), Query Frame = 0
Query:    6 YNAAGVIGSLITAFSIVPQIVRVVQRRSSADISYTYQAVFITGIGFFLVYYGYYE-LWEVFLPTTLSAVIMLSLVGLKVHYE----KVSPSRTAAAA 97
            Y   G++GSL+ A S+VPQ+++V + +++ DIS T+Q  ++ G+   +V YG+   LW VF+P T+       L G+K++++    K   S+ A A+
Sbjct:   47 YQILGLVGSLLLAASLVPQMMKVYKTKTAKDISLTFQLTYLVGLSM-IVAYGFGRWLWPVFIPATIELFAAFVLFGMKIYFDWQNRKQDVSKAAGAS 142          
BLAST of mRNA_C-linearis_contig7.14538.1 vs. uniprot
Match: A0A662XQM1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XQM1_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 4.400e-7
Identity = 29/83 (34.94%), Postives = 54/83 (65.06%), Query Frame = 0
Query:    5 LYNAAGVIGSLITAFSIVPQIVRVVQRRSSADISYTYQAVFITGIGFFLVYYGYYE-LWEVFLPTTLSAVIMLSLVGLKVHYE 86
            +Y   G++GSL+ A S+VPQ+ +V + +S+ DIS T+Q  ++ G+   +V YG+   LW +++P T+     L+L  +K++Y+
Sbjct:    9 VYQILGLLGSLLLAASLVPQMWKVYRTKSAKDISLTFQLTYLLGLSM-IVAYGFGRWLWPIYIPATIELCAALTLFSMKLYYD 90          
BLAST of mRNA_C-linearis_contig7.14538.1 vs. uniprot
Match: A0A662YHH4_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YHH4_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 8.230e-7
Identity = 29/82 (35.37%), Postives = 53/82 (64.63%), Query Frame = 0
Query:    6 YNAAGVIGSLITAFSIVPQIVRVVQRRSSADISYTYQAVFITGIGFFLVYYGYYE-LWEVFLPTTLSAVIMLSLVGLKVHYE 86
            Y   G++GSL+ A S+VPQ+ +V + +S+ DIS T+Q  ++ G+   +V YG+   LW +++P T+     L+L  +K++Y+
Sbjct:  299 YQILGLLGSLLLAASLVPQMWKVYRTKSAKDISLTFQLTYLLGLSM-IVAYGFGRWLWPIYIPATIELCAALTLFSMKLYYD 379          
BLAST of mRNA_C-linearis_contig7.14538.1 vs. uniprot
Match: A0A7S1NG12_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NG12_9EUGL)

HSP 1 Score: 49.7 bits (117), Expect = 9.250e-5
Identity = 29/84 (34.52%), Postives = 47/84 (55.95%), Query Frame = 0
Query:   13 GSLITAFSIVPQIVRVVQRRSSADISYTYQAVFITGIGFFLVYYGYYELWEVFLPTTLSAVIMLSLVGLKVHYEKVSPSRTAAA 96
            G L+ A S+VPQ+ + ++ RS+ DISY YQAV++ G+   L Y     L  ++ P       + +L  LKV++E + P+    A
Sbjct:   55 GGLLVAVSLVPQLYKTIRTRSTQDISYGYQAVYMIGLAGILYYALALGLPAIYGPAFFEFFCIAALTVLKVYFEYLRPAAPCEA 138          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig7.14538.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A6H5KU65_9PHAE4.240e-2544.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1V2_ECTSI6.320e-2448.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K0Z2_9PHAE1.330e-1637.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCW9_ECTSI1.390e-1038.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A662WU06_9STRA5.990e-1029.47Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A3R7J1S1_9STRA2.320e-834.02Uncharacterized protein n=1 Tax=Phytophthora kerno... [more]
A0A3F2RW24_9STRA3.810e-834.02Uncharacterized protein n=1 Tax=Phytophthora kerno... [more]
A0A662XQM1_9STRA4.400e-734.94Uncharacterized protein (Fragment) n=1 Tax=Nothoph... [more]
A0A662YHH4_9STRA8.230e-735.37Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A7S1NG12_9EUGL9.250e-534.52Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006603PQ-loop repeatPFAMPF04193PQ-loopcoord: 6..55
e-value: 1.1E-5
score: 25.0
NoneNo IPR availableGENE3D1.20.1280.290coord: 2..89
e-value: 5.5E-13
score: 50.8
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..26
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 38..58
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 59..63
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 84..136
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 27..37
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 64..83
NoneNo IPR availableTMHMMTMhelixcoord: 4..26
NoneNo IPR availableTMHMMTMhelixcoord: 64..81
NoneNo IPR availableTMHMMTMhelixcoord: 37..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig7contigC-linearis_contig7:2972345..2977673 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig7.14538.1mRNA_C-linearis_contig7.14538.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig7 2971025..2977725 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig7.14538.1 ID=prot_C-linearis_contig7.14538.1|Name=mRNA_C-linearis_contig7.14538.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=137bp
MSDALYNAAGVIGSLITAFSIVPQIVRVVQRRSSADISYTYQAVFITGIG
FFLVYYGYYELWEVFLPTTLSAVIMLSLVGLKVHYEKVSPSRTAAAATVG
EEGAGGDSEPRRRGERSVRAKDADRTSEVQPLMSSW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006603PQ-loop_rpt