prot_C-linearis_contig7.14531.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-linearis_contig7.14531.1
Unique Name	prot_C-linearis_contig7.14531.1
Type	polypeptide
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length	185

Homology

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BLAST of mRNA_C-linearis_contig7.14531.1 vs. uniprot
Match: D7G1U6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1U6_ECTSI)

HSP 1 Score: 341 bits (874), Expect = 3.840e-118
Identity = 178/184 (96.74%), Postives = 181/184 (98.37%), Query Frame = 0

Query:    1 MSALEEKSQAADAPAADESEDNRSVHLVSQEGESFDIKVTVAKMSNLVKTMIDEEAEEDGDAQEIPLPNVKASVLSKVIEFCKHYKEDPMNEIEKPLKSANMHDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRKTFNIVNDFTPEEEAQVREENKWCEDA 184
            MSALEEKSQAADAP ADE+ED RSVHLVSQEGESFDIKV+VAKMSNLVKTMIDE+AEEDGDAQEIPLPNVKASVLSKVIEFC HYKEDPMNEIEKPLKSANMHDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRKTFNIVNDFTPEEEAQVREENKWCEDA
Sbjct:    1 MSALEEKSQAADAP-ADETEDTRSVHLVSQEGESFDIKVSVAKMSNLVKTMIDEDAEEDGDAQEIPLPNVKASVLSKVIEFCAHYKEDPMNEIEKPLKSANMHDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRKTFNIVNDFTPEEEAQVREENKWCEDA 183

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BLAST of mRNA_C-linearis_contig7.14531.1 vs. uniprot
Match: A0A836CN28_9STRA (Skp1 family, dimerization domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN28_9STRA)

HSP 1 Score: 282 bits (722), Expect = 5.420e-95
Identity = 141/172 (81.98%), Postives = 157/172 (91.28%), Query Frame = 0

Query:   13 APAADESEDNRSVHLVSQEGESFDIKVTVAKMSNLVKTMIDEEAEEDGDAQEIPLPNVKASVLSKVIEFCKHYKEDPMNEIEKPLKSANMHDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRKTFNIVNDFTPEEEAQVREENKWCEDA 184
            A AA  +E+ R+VHLVSQEG+SFD+ V VAKMS LVKTM+DEE EED +AQEIPLPNVK+SVL+KVIEFC+HY EDPMNEIEKPLKSANM +VVQ W+A +V+V+QE LFELILAANYMDIKPLLDLTCATVASMIKGKT EEIRKTFNIVNDFTPEEEAQVREENKWCE+A
Sbjct:   11 AEAAPTAEETRTVHLVSQEGDSFDVSVKVAKMSELVKTMLDEELEEDAEAQEIPLPNVKSSVLTKVIEFCRHYVEDPMNEIEKPLKSANMQEVVQNWFATYVQVEQEVLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRKTFNIVNDFTPEEEAQVREENKWCEEA 182

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BLAST of mRNA_C-linearis_contig7.14531.1 vs. uniprot
Match: A0A835Z9K0_9STRA (Skp1 family, dimerization domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9K0_9STRA)

HSP 1 Score: 280 bits (716), Expect = 5.270e-94
Identity = 142/184 (77.17%), Postives = 164/184 (89.13%), Query Frame = 0

Query:   10 AADAPAAD---------ESEDNRSVHLVSQEGESFDIKVTVAKMSNLVKTMIDEEAEEDGDAQEIPLPNVKASVLSKVIEFCKHYKEDPMNEIEKPLKSANMHDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRKTFNIVNDFTPEEEAQVREENKWCEDA 184
            AA APAA+         ++ED R+V+LVSQEG+SFD+ + VAKMS LVKTMID++A+ED +AQEIPLPNVK+SVL+K+IEFC+HY EDPMNEIEKPLKSANM +VVQ+W+A FV+V+QE LFELILAANYMDIKPLLDLTCATVASMIKGKT EEIRKTFNIVNDFTPEEEAQVREENKWCE+A
Sbjct:    4 AAAAPAAEAAPAAATETQAEDTRTVNLVSQEGDSFDVSIKVAKMSELVKTMIDDDADEDAEAQEIPLPNVKSSVLTKIIEFCRHYIEDPMNEIEKPLKSANMQEVVQDWFANFVQVEQELLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRKTFNIVNDFTPEEEAQVREENKWCEEA 187

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BLAST of mRNA_C-linearis_contig7.14531.1 vs. uniprot
Match: A0A7S3HQT9_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HQT9_9STRA)

HSP 1 Score: 269 bits (688), Expect = 5.070e-90
Identity = 133/167 (79.64%), Postives = 153/167 (91.62%), Query Frame = 0

Query:   18 ESEDNRSVHLVSQEGESFDIKVTVAKMSNLVKTMIDEEAEEDGDAQEIPLPNVKASVLSKVIEFCKHYKEDPMNEIEKPLKSANMHDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRKTFNIVNDFTPEEEAQVREENKWCEDA 184
            E++DNR++HLVSQEGE FD+ ++V KMS LVKTMIDE+  E+ +AQEIPLPNVK+++LSKVIEF KHYKE+PMNEIEKPLKSANM +VVQEWY+ F+ V QE LFELILAANYMDIKPLLDLTCATVASMIKGK+ E+IRKTFNIVNDFTPEEEAQVREENKWCE+A
Sbjct:    3 EADDNRTIHLVSQEGECFDVPISVGKMSELVKTMIDEDQNEE-EAQEIPLPNVKSAILSKVIEFTKHYKEEPMNEIEKPLKSANMAEVVQEWYSNFIAVDQEILFELILAANYMDIKPLLDLTCATVASMIKGKSPEDIRKTFNIVNDFTPEEEAQVREENKWCEEA 168

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BLAST of mRNA_C-linearis_contig7.14531.1 vs. uniprot
Match: A0A7S2BM50_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BM50_9STRA)

HSP 1 Score: 269 bits (688), Expect = 8.450e-90
Identity = 137/184 (74.46%), Postives = 159/184 (86.41%), Query Frame = 0

Query:    1 MSALEEKSQAADAPAADESEDNRSVHLVSQEGESFDIKVTVAKMSNLVKTMIDEEAEEDGDAQEIPLPNVKASVLSKVIEFCKHYKEDPMNEIEKPLKSANMHDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRKTFNIVNDFTPEEEAQVREENKWCEDA 184
            M+A + + +  D P ADE +D + V LVSQEG++F ++  VAKMS LVKTMI EE + + D QEIPLPNVK+ +L KV+EFCKHY E+PMNEIEKPLKS+NMH+VVQEWYA +VEV+QETLFELILAANYMDIKPLLDLTCATVASMIKGKT E+IRKTFNIVNDFTPEEEAQVREENKWCE+A
Sbjct:    1 MAAEQTEDKKIDEPEADE-DDGKMVDLVSQEGDNFQVEKRVAKMSELVKTMIPEEEDGETDQQEIPLPNVKSQILGKVMEFCKHYCEEPMNEIEKPLKSSNMHEVVQEWYANYVEVEQETLFELILAANYMDIKPLLDLTCATVASMIKGKTPEDIRKTFNIVNDFTPEEEAQVREENKWCEEA 183

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BLAST of mRNA_C-linearis_contig7.14531.1 vs. uniprot
Match: A0A7S2SQM9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQM9_9STRA)

HSP 1 Score: 267 bits (682), Expect = 6.690e-89
Identity = 140/184 (76.09%), Postives = 158/184 (85.87%), Query Frame = 0

Query:    1 MSALEEKSQAADAPAADESEDNRSVHLVSQEGESFDIKVTVAKMSNLVKTMIDEEAEEDGDAQEIPLPNVKASVLSKVIEFCKHYKEDPMNEIEKPLKSANMHDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRKTFNIVNDFTPEEEAQVREENKWCEDA 184
            M+A EEK+  AD   A+E ED  +V LVSQEG++F ++  VAKMS LVKTM+ +E E D + QEIPLPNVK+SVL KVIEFC+HYKEDPM EIEKPLKS+ M +VVQEWYA FV+V+QE LFELILAANYMDIKPLLDLTCATVASMIKGKT EEIRKTFNIVNDFTPEEEAQVREENKWCE+A
Sbjct:    1 MAAAEEKN-GADPMVAEEEEDEGNVQLVSQEGDNFQVEAKVAKMSELVKTMLPDEDEGD-EVQEIPLPNVKSSVLGKVIEFCRHYKEDPMTEIEKPLKSSTMSEVVQEWYATFVDVEQEVLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRKTFNIVNDFTPEEEAQVREENKWCEEA 182

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BLAST of mRNA_C-linearis_contig7.14531.1 vs. uniprot
Match: A0A7S3JW81_9STRA (Hypothetical protein n=3 Tax=Pelagomonadales TaxID=54409 RepID=A0A7S3JW81_9STRA)

HSP 1 Score: 270 bits (689), Expect = 7.940e-89
Identity = 137/168 (81.55%), Postives = 152/168 (90.48%), Query Frame = 0

Query:   18 ESEDNRSVHLVSQEGESFDIKVTVAKMSNLVKTMIDEEAEEDGD-AQEIPLPNVKASVLSKVIEFCKHYKEDPMNEIEKPLKSANMHDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRKTFNIVNDFTPEEEAQVREENKWCEDA 184
            E +D+R V+L+SQEG+ F+++V VAKMS LVKTMI EEA+ED D AQEIPLPNVK+ VLSKVIEFC+ Y  DPM EIEKPLKSANMH+VVQEWYAK+V+V QE LFELILAANYMDIKPLLDLTCATVASMIKGKT EEIRKTFNIVNDFTPEEEAQVREENKWCE+A
Sbjct:   93 EEDDSRRVNLMSQEGDQFEVEVAVAKMSELVKTMIPEEADEDDDQAQEIPLPNVKSHVLSKVIEFCRQYVNDPMAEIEKPLKSANMHEVVQEWYAKYVDVDQELLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRKTFNIVNDFTPEEEAQVREENKWCEEA 260

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BLAST of mRNA_C-linearis_contig7.14531.1 vs. uniprot
Match: F0XYF9_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYF9_AURAN)

HSP 1 Score: 260 bits (665), Expect = 1.110e-86
Identity = 128/157 (81.53%), Postives = 145/157 (92.36%), Query Frame = 0

Query:   28 VSQEGESFDIKVTVAKMSNLVKTMIDEEAEEDGDAQEIPLPNVKASVLSKVIEFCKHYKEDPMNEIEKPLKSANMHDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRKTFNIVNDFTPEEEAQVREENKWCEDA 184
            +SQEG+ F+++V VAKMS LVKTMI EEA+E+ +AQEIPLPNVK+ VL+KVIEFC+ Y E+PM+EIEKPLKSANMH+VVQEWYA +V+V QE LFELILAANYMDIKPLLDLTCATVASMIKGKT EEIRKTFNIVNDFTPEEEAQVREENKWCE+A
Sbjct:    1 MSQEGDQFEVEVKVAKMSELVKTMIPEEADEEEEAQEIPLPNVKSHVLAKVIEFCRRYAEEPMSEIEKPLKSANMHEVVQEWYANYVDVDQELLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRKTFNIVNDFTPEEEAQVREENKWCEEA 157

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BLAST of mRNA_C-linearis_contig7.14531.1 vs. uniprot
Match: A0A7S2DNG6_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DNG6_9STRA)

HSP 1 Score: 260 bits (664), Expect = 1.010e-85
Identity = 131/168 (77.98%), Postives = 148/168 (88.10%), Query Frame = 0

Query:   17 DESEDNRSVHLVSQEGESFDIKVTVAKMSNLVKTMIDEEAEEDGDAQEIPLPNVKASVLSKVIEFCKHYKEDPMNEIEKPLKSANMHDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRKTFNIVNDFTPEEEAQVREENKWCEDA 184
            D  +D + V LVSQEG++F ++  VAKMS LVKTMI E+ EE  D QEIPLPNVK+++L KVIEFCKH+  +PM+EIEKPLKS+NMH+VVQEWYA +VEV QETLFELILAANYMDIKPLLDLTCATVASMIKGKT EEIRKTFNIVNDFTPEEEAQVREENKWCE+A
Sbjct:   46 DAEDDGKHVDLVSQEGDNFQVEKKVAKMSELVKTMIPED-EEGEDQQEIPLPNVKSAILGKVIEFCKHHANEPMSEIEKPLKSSNMHEVVQEWYANYVEVDQETLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRKTFNIVNDFTPEEEAQVREENKWCEEA 212

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BLAST of mRNA_C-linearis_contig7.14531.1 vs. uniprot
Match: A0A4D9D5I6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D5I6_9STRA)

HSP 1 Score: 256 bits (653), Expect = 1.370e-84
Identity = 125/163 (76.69%), Postives = 145/163 (88.96%), Query Frame = 0

Query:   20 EDNRSVHLVSQEGESFDIKVTVAKMSNLVKTMIDEEAEEDGDAQEIPLPNVKASVLSKVIEFCKHYKEDPMNEIEKPLKSANMHDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRKTFNIVNDFTPEEEAQVREENKWCE 182
            E  + VHLVSQEG+ ++++V+V KMS LVKTM+ ++ ++  + QEIPLPNVK +VL+KVIEFCKH+KEDPMN+IEKPLKSANMH+VVQ+WYA FV V QE LFELILAANYMDIKPLLDLTCATVASMIKGKT EEIR+TFNI NDFTPEEEAQVREENKWCE
Sbjct:    9 ESGKVVHLVSQEGDQYEVEVSVCKMSELVKTMLPDD-DDSSETQEIPLPNVKNNVLAKVIEFCKHHKEDPMNDIEKPLKSANMHEVVQDWYANFVNVDQELLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRRTFNITNDFTPEEEAQVREENKWCE 170

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig7.14531.1 vs. uniprot

BLAST of mRNA_C-linearis_contig7.14531.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G1U6_ECTSI	3.840e-118	96.74	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A836CN28_9STRA	5.420e-95	81.98	Skp1 family, dimerization domain-containing protei...	[more]
A0A835Z9K0_9STRA	5.270e-94	77.17	Skp1 family, dimerization domain-containing protei...	[more]
A0A7S3HQT9_9STRA	5.070e-90	79.64	Hypothetical protein n=1 Tax=Spumella elongata Tax...	[more]
A0A7S2BM50_9STRA	8.450e-90	74.46	Hypothetical protein n=1 Tax=Florenciella parvula ...	[more]
A0A7S2SQM9_9STRA	6.690e-89	76.09	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A7S3JW81_9STRA	7.940e-89	81.55	Hypothetical protein n=3 Tax=Pelagomonadales TaxID...	[more]
F0XYF9_AURAN	1.110e-86	81.53	Uncharacterized protein n=1 Tax=Aureococcus anopha...	[more]
A0A7S2DNG6_9STRA	1.010e-85	77.98	Hypothetical protein n=2 Tax=Dictyocha speculum Ta...	[more]
A0A4D9D5I6_9STRA	1.370e-84	76.69	Uncharacterized protein n=1 Tax=Nannochloropsis sa...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001232	S-phase kinase-associated protein 1-like	SMART	SM00512	skp1_3	coord: 22..133 e-value: 2.1E-28 score: 110.4
IPR016897	S-phase kinase-associated protein 1	PIRSF	PIRSF028729	SCF_Skp	coord: 3..184 e-value: 2.8E-60 score: 200.8
IPR016072	SKP1 component, dimerisation	PFAM	PF01466	Skp1	coord: 134..181 e-value: 7.4E-28 score: 96.4
IPR016073	SKP1 component, POZ domain	PFAM	PF03931	Skp1_POZ	coord: 24..86 e-value: 1.9E-18 score: 66.3
None	No IPR available	GENE3D	3.30.710.10		coord: 18..184 e-value: 4.4E-65 score: 220.6
None	No IPR available	PANTHER	PTHR11165:SF120	S-PHASE KINASE-ASSOCIATED PROTEIN 1	coord: 24..183
None	No IPR available	PANTHER	PTHR11165	SKP1	coord: 24..183
IPR036296	SKP1-like, dimerisation domain superfamily	SUPERFAMILY	81382	Skp1 dimerisation domain-like	coord: 107..181
IPR011333	SKP1/BTB/POZ domain superfamily	SUPERFAMILY	54695	POZ domain	coord: 24..89

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig7	contig	C-linearis_contig7:2925997..2928220 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig7.14531.1	mRNA_C-linearis_contig7.14531.1	Chordaria linearis ClinC8C monoicous	mRNA	C-linearis_contig7 2925246..2929850 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-linearis_contig7.14531.1 ID=prot_C-linearis_contig7.14531.1|Name=mRNA_C-linearis_contig7.14531.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=185bp
MSALEEKSQAADAPAADESEDNRSVHLVSQEGESFDIKVTVAKMSNLVKT
MIDEEAEEDGDAQEIPLPNVKASVLSKVIEFCKHYKEDPMNEIEKPLKSA
NMHDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKG
KTAEEIRKTFNIVNDFTPEEEAQVREENKWCEDA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001232	SKP1-like
IPR016897	SKP1
IPR016072	Skp1_comp_dimer
IPR016073	Skp1_comp_POZ
IPR036296	SKP1-like_dim_sf
IPR011333	SKP1/BTB/POZ_sf