prot_C-linearis_contig7.14500.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig7.14500.1
Unique Nameprot_C-linearis_contig7.14500.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length489
Homology
BLAST of mRNA_C-linearis_contig7.14500.1 vs. uniprot
Match: A0A6H5KKG2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKG2_9PHAE)

HSP 1 Score: 369 bits (947), Expect = 1.160e-117
Identity = 238/396 (60.10%), Postives = 284/396 (71.72%), Query Frame = 0
Query:    4 LSRKDKERRTAERGRRILNTLDLVDTLMKSEVNLLETLEELSSTFRDENGVIQEERLVGEIARPVMARIRRLKTRDAYRRRQLARSRGEQLGPSFGAKAFEEQAKPFPKTAAGIDEFLRSTKVTAWDAVRAYKVVTPSERIRRQKISLRYRDPVRWHADKMADHRRRN----DPAYLAEKREERRLRAIRRYETRRRNGNSGKGKPRSKADQKKVEELAAARAAAIAAGLATEADFAPPR-KRIYKKDIPTVKRRRGRPSRVLTAEEQAAKAL----GPRPAGRPRKLPVEPPPSPAKDPATGCHVTASLAGIVSAWMAGAAAQAAHAA--GGPRSVVASADLESRVKALAVSRTKEVTGTGP---GDVWTPRMTRIALAGIEAWDEKWREVLAGA 385
            L+  +K ++ A RGRRI +T+DL++TLM SEV+L + L + SST  D  G+++EERLVGEIARPV+ARIRR +TR A  RRQ AR   E    +   +  + + KPFP TA  ID+FL S KVT WDA+R+Y+V+T  E+IRRQKI+L   DPV+W A++M +  R+     DP  L   REERRLRAIRRYETRRRNGNSGKGKPRSKADQ+K EELAAARAAAIA GLATEADFAPP  +R++KKDIPTVKRRRGRP +VLT EE+ A+AL    GP P GR R L    PP P   P   CHVTA++   V  WMA AAA+AA AA   G RSV A ADLE+  KALAVS+TKEVTG G    G VWT  MTRIALAGIEAW +KWRE+   A
Sbjct:  173 LTAAEKAQQKAFRGRRIEDTVDLMETLMNSEVDLQDVLRQYSSTATDAEGLLKEERLVGEIARPVVARIRRYRTRIAALRRQAARRLAEHDPSTRRPERRKRKVKPFPTTAKEIDDFLLSYKVTVWDAIRSYEVITTGEKIRRQKIALSITDPVQWEANRMEELERKRAMQKDPDEL---REERRLRAIRRYETRRRNGNSGKGKPRSKADQRKAEELAAARAAAIATGLATEADFAPPAPRRVFKKDIPTVKRRRGRPRKVLTEEEKMARALRQANGPLPRGRQRDLTG--PPLPLDAP---CHVTAAVTENVREWMAAAAAEAAAAAMSNGVRSVTA-ADLEAHAKALAVSKTKEVTGGGGRXGGGVWTAGMTRIALAGIEAWKDKWREIYPDA 559          
BLAST of mRNA_C-linearis_contig7.14500.1 vs. uniprot
Match: D7G140_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G140_ECTSI)

HSP 1 Score: 339 bits (870), Expect = 2.160e-106
Identity = 230/396 (58.08%), Postives = 270/396 (68.18%), Query Frame = 0
Query:    4 LSRKDKERRTAERGRRILNTLDLVDTLMKSEVNLLETLEELSSTFRDENGVIQEERLVGEIARPVMARIRRLKTRDAYRRRQLARSRGEQLGPSFGAKAFEEQAKPFPKTAAGIDEFLRSTKVTAWDAVRAYKVVTPSERIRRQKISLRYRDPVRWHADKMADHRRRN----DPAYLAEKREERRLRAIRRYETRRRNGNSGKGKPRSKADQKKVEELAAARAAAIAAGLATEADFAPPR-KRIYKKDIPTVKRRRGRPSRVLTAEEQAAKAL----GPRPAGRPRKLPVEPPPSPAKDPATGCHVTASLAGIVSAWMAGAAAQAAHAA--GGPRSVVASADLESRVKALAVSRTKEVTG---TGPGDVWTPRMTRIALAGIEAWDEKWREVLAGA 385
            L+  +K ++ A RGRRI +T DL++TLM SEV+L + L + SST  D  G ++EERLVGEIARPV+ARIRR +TR A  RRQ AR   EQ   +   +  + +AKPFP TA  ID+FL S KVT WDA+R    +T               DPV+W A++M +  R+     DP  L E   ERRLRAIRRYE RRRNGNSGKGKPRSKADQ+K EELAAARAAAIAAGLATEADFAPP  +RI+KKDIPTVKRRRGRP +VLT EE+ A+AL    GP P GR R L   PPP P   P   CHVTA++   V  WMA AAA+AA AA   G RSV A ADLE+  KALAVS+TKEVTG    G G VW+  MTRIALAG+EAW +KWREV   A
Sbjct:  173 LTAAEKAQQKAYRGRRIKDTADLMETLMNSEVDLQDVLRKHSSTATDAEGFLKEERLVGEIARPVVARIRRYRTRIAALRRQAARRLAEQYPSTKRPERRKRKAKPFPTTAKEIDDFLLSYKVTVWDAIR----IT---------------DPVQWEANRMEELERKRAMQKDPEELQE---ERRLRAIRRYEARRRNGNSGKGKPRSKADQRKAEELAAARAAAIAAGLATEADFAPPAPRRIFKKDIPTVKRRRGRPRKVLTEEEKMARALRQANGPLPRGRQRDL-TGPPPPPLDAP---CHVTAAVTENVREWMAAAAAEAAAAAMSNGVRSVTA-ADLEAHAKALAVSKTKEVTGGGGRGGGGVWSAGMTRIALAGMEAWHDKWREVYPDA 541          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig7.14500.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KKG2_9PHAE1.160e-11760.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G140_ECTSI2.160e-10658.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig7contigC-linearis_contig7:2655539..2661547 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig7.14500.1mRNA_C-linearis_contig7.14500.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig7 2655538..2661547 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig7.14500.1 ID=prot_C-linearis_contig7.14500.1|Name=mRNA_C-linearis_contig7.14500.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=489bp
EGVLSRKDKERRTAERGRRILNTLDLVDTLMKSEVNLLETLEELSSTFRD
ENGVIQEERLVGEIARPVMARIRRLKTRDAYRRRQLARSRGEQLGPSFGA
KAFEEQAKPFPKTAAGIDEFLRSTKVTAWDAVRAYKVVTPSERIRRQKIS
LRYRDPVRWHADKMADHRRRNDPAYLAEKREERRLRAIRRYETRRRNGNS
GKGKPRSKADQKKVEELAAARAAAIAAGLATEADFAPPRKRIYKKDIPTV
KRRRGRPSRVLTAEEQAAKALGPRPAGRPRKLPVEPPPSPAKDPATGCHV
TASLAGIVSAWMAGAAAQAAHAAGGPRSVVASADLESRVKALAVSRTKEV
TGTGPGDVWTPRMTRIALAGIEAWDEKWREVLAGAGDGDGDSDGDSDGDG
DDGGADAEADAASEGSGSAKEDGEKRGRDDAPGVPSTPKAPRDGRPARKG
AGEEGEGIVAAKAKAAPTAVAMMRPGLLAGKAAAVAEGG
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