prot_C-linearis_contig7.14488.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig7.14488.1
Unique Nameprot_C-linearis_contig7.14488.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length249
Homology
BLAST of mRNA_C-linearis_contig7.14488.1 vs. uniprot
Match: A0A6H5JED9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JED9_9PHAE)

HSP 1 Score: 349 bits (896), Expect = 1.790e-119
Identity = 189/255 (74.12%), Postives = 208/255 (81.57%), Query Frame = 0
Query:    1 MVPRVLGAIACGSCAVSAFVVPAVVRPSARQSDASSRHSSTI-----RQAPLMMAGXXXXXXXXXXERNSQSRREVIAG--VGKAMAAAVAVSTAASMAVPQEAAAFGPIKMELTDPEYASVVCPPKTQVPGEKAGAGLKPVCVQVTVTANNPSPKEVVDAAVFGFVLDEEATSVVANNPDGASDAGQFAIIDKIPKGSSRVSFQFVAAIEPSENFDSKKLKFRSLKAISYAGGKQYGAITECEMNPLAAECDFD 248
            M+PRVLG I CG+CA SAFV P+V+R   +  D  SR+SS       R+  + M G              QSRR VIAG  VGK++AAAV V+T AS +VP EAAAFGPIKMELT+PEYASVVCPPKTQVPGEKAGAGLKPVCV+VTVTANNPSPKEVVDAAVFGFV DE++TSVVANNPDGASDAGQFAIIDKIPKGSSRVSFQFVAAIEP E+F  KKLKF+SLKAISYAGG+QYGAITECEMNPLAAECDFD
Sbjct:    1 MIPRVLGFIVCGACAASAFVAPSVLRSQQQHGDTPSRYSSRSSSVGHRREAMSMGG------------EPQSRRNVIAGKGVGKSVAAAVGVTTLASASVPDEAAAFGPIKMELTEPEYASVVCPPKTQVPGEKAGAGLKPVCVKVTVTANNPSPKEVVDAAVFGFVFDEDSTSVVANNPDGASDAGQFAIIDKIPKGSSRVSFQFVAAIEPDEDFSLKKLKFKSLKAISYAGGQQYGAITECEMNPLAAECDFD 243          
BLAST of mRNA_C-linearis_contig7.14488.1 vs. uniprot
Match: A0A835YQZ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQZ7_9STRA)

HSP 1 Score: 200 bits (508), Expect = 1.160e-60
Identity = 101/170 (59.41%), Postives = 127/170 (74.71%), Query Frame = 0
Query:   79 MAAAVAVSTAASMAVPQEAAAFGPIKMELTDPEYASVVCPPKTQVPGEKAGAGLKPVCVQVTVTANNPSPKEVVDAAVFGFVLDEEATSVVANNPDGASDAGQFAIIDKI-PKGSSRVSFQFVAAIEPSENFDSKKLKFRSLKAISYAGGKQYGAITECEMNPLAAECDF 247
            +AAA+A++TA S      A A GP+K+ LT+P YA V CPP TQVPG+KAGAGL+PVC++V   A+NP+ K++ + A+FG V DE+ TSVVANNPDG +DAGQFA+I+ + P G S++ FQFVAAI P E    K L F S+KAISY G  +YGAITECEMNPLA ECD 
Sbjct:   62 VAAALALTTAVS-----PADAIGPVKIALTNPTYAEVTCPPNTQVPGQKAGAGLRPVCIKVKADADNPAKKDLENPAIFGRVFDEDGTSVVANNPDGGTDAGQFAMIEGVVPPGKSKIEFQFVAAIGPKEELSKKTLTFPSIKAISYPGAGRYGAITECEMNPLADECDL 226          
BLAST of mRNA_C-linearis_contig7.14488.1 vs. uniprot
Match: A0A7S4D819_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D819_HETAK)

HSP 1 Score: 150 bits (378), Expect = 6.260e-41
Identity = 88/183 (48.09%), Postives = 112/183 (61.20%), Query Frame = 0
Query:   67 SRREVIAGVGKAMAAAVAVSTAASMAVPQEAAAFGPIKMELTDPEYASVVCPPKTQVPGE---KAGAGLKPVCVQVTVTANNPSPKEVVDAAVFGFVLDEEATSVVANNPDGASDAGQFAIIDKIPKGSSRVSFQFVAAIEPSENFDSKKLKFRSLKAISYAGGKQYGAITECEMNPLAAECD 246
            SRRE+ +   K+ AA    S   + A P  A+A GP+KM LT+  Y +V C  K    G    K+ AGL   CV+VT    NP  K ++DA+VFGFV D   +SVV NNPD  SDAGQFAII KI  G S + F+ VAA+ PSE  D  +L+F S+KAISY GG +Y AI++C+ NP    CD
Sbjct:   68 SRRELFSAAAKSGAAFGLASAFTTGAAPM-ASAIGPVKMPLTNIAYQAVDCKGKELSGGSFTSKSTAGLVSYCVEVTADVFNPEKKTIIDASVFGFVFDNTGSSVVLNNPDARSDAGQFAIIPKIVPGKSNIKFEMVAAV-PSERGDVGELRFESIKAISYPGGDRYKAISDCDFNPSGDGCD 248          
BLAST of mRNA_C-linearis_contig7.14488.1 vs. uniprot
Match: A0A7S2SGY2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SGY2_9STRA)

HSP 1 Score: 140 bits (352), Expect = 7.860e-37
Identity = 83/186 (44.62%), Postives = 111/186 (59.68%), Query Frame = 0
Query:   68 RREVIAGVGKAMAAAVAVSTAASMAVPQEAAAFGPIKMELTDPEYASVVCPPKTQ---VPGEKAGAGLKPV---CVQVTVTANNPSPKEVVDAAVFGFVLDE-EATSVVANNPDGASDAGQFAIIDKIPKGSSRVSFQFVAAIEPSENFDSKKLKFRSLKAISYAGGKQYGAITECEMNPLAAECD 246
            RR+ I     A AA +A++          A A GP+ MEL+D EY +V CPP  +   + G   G+  + V   CV+VT +  NP+ K +VD AVFGFVLD     SV+ANNPD  SDAGQFA ID++P G  RVSF FVA +          L+FRS+KAISY GG ++  ++ CE++ LA EC+
Sbjct:   77 RRDAIKSTLAAAAATLALAG-------PRAEAVGPVNMELSDVEYEAVECPPSLKAGRIGGAFGGSASRQVLQQCVKVTCSVTNPTKKSLVDTAVFGFVLDPITGASVIANNPDLRSDAGQFASIDEVPPGDQRVSFIFVATLGKESEGKLPPLEFRSIKAISYPGGARFAELSPCELDSLAPECE 255          
BLAST of mRNA_C-linearis_contig7.14488.1 vs. uniprot
Match: A0A1Z5J9N6_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J9N6_FISSO)

HSP 1 Score: 139 bits (349), Expect = 1.070e-36
Identity = 67/165 (40.61%), Postives = 102/165 (61.82%), Query Frame = 0
Query:   88 AASMAVPQEAAAFGPIKMELTDPEYASVVCPPKTQVPGEKAGAGLKPVCVQVTVTANNPSPKEVVDAAVFGFVLD-EEATSVVANNPDGASDAGQFAIIDKIPKGSSRVSFQFVAAIEPSENFDSKK-----LKFRSLKAISYAGGKQYGAITECEMNPLAAECD 246
            A+++  PQ A A GP+++ LT   Y +  CPP   +PG+KA  G++ +CV V  T N+P PKE+    V+GF+ D +   SV+ANNPD ++DAGQFAI++K+      + F+F+AA+   ++          L F SL+ +S+ GG+QYG I  CEMN  + EC+
Sbjct:   56 ASALLTPQSAHAIGPVRVSLTPTSYIARTCPPNKPIPGQKAMQGMRGLCVTVQATLNDPVPKELEKVGVYGFITDGDTGDSVLANNPDLSTDAGQFAIVEKVKTTDKTIEFEFIAAVPREKDLTQYDNGIGPLHFESLRLVSFPGGQQYGEINPCEMNEFSIECE 220          
BLAST of mRNA_C-linearis_contig7.14488.1 vs. uniprot
Match: K0THP2_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0THP2_THAOC)

HSP 1 Score: 137 bits (346), Expect = 5.530e-36
Identity = 71/164 (43.29%), Postives = 106/164 (64.63%), Query Frame = 0
Query:   90 SMAVPQEAAAFGPIKMELTDPEYASVVCPPKTQVPGEKAGAGLKPVCVQVTVTANNPSPKEVVDAAVFGFVLDEEAT-SVVANNPDGASDAGQFAIIDKIPKGSSRVSFQFVAAIEPSENFDSK------KLKFRSLKAISYAGGKQYGAITECEMNPLAAECD 246
            +++V   A A GPIK+++ +P Y +  CP    +PGEKA  G++ +CVQV       SPK++    ++G+V D E+T SV+ANNPD  +DAGQFAII +I     ++ F+F+AA+ P E   SK       L F+SL+ +S+ GG+QYGAI+ CEMN  ++EC+
Sbjct:   82 NLSVGGTAEAIGPIKIDIINPSYVAAPCPKDKPIPGEKAMKGMRGLCVQVKAELAENSPKDLEKVGIYGYVDDAESTESVLANNPDSGTDAGQFAIIPEIKTTDKKIEFEFIAAV-PMEKDISKYEDGIGPLSFKSLRIVSFPGGQQYGAISPCEMNEFSSECE 244          
BLAST of mRNA_C-linearis_contig7.14488.1 vs. uniprot
Match: A0A7S2KRJ0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KRJ0_9STRA)

HSP 1 Score: 135 bits (339), Expect = 2.220e-35
Identity = 76/180 (42.22%), Postives = 112/180 (62.22%), Query Frame = 0
Query:   74 GVGKAMAAAVAVSTAASMAVPQEAAAFGPIKMELTDPEYASVVCPPKTQVPGEKAGAGLKPVCVQVTVTANNPSPKEVVDAAVFGFVLDEEAT-SVVANNPDGASDAGQFAIIDKIPKGSSRVSFQFVAAIEPSENFDSKK------LKFRSLKAISYAGGKQYGAITECEMNPLAAECD 246
            G   A AAA+A+ T +++ + Q A+A GP+K+ L   +Y + +CPP   +PGEKA  G++ +CV V       +PK++    V+GFV D   + SV+ANNPD ++DAGQF++I+ +      V F+FVAA+ P E   SK+      L F SL+ IS+ GG+QYGAI  CEMN  + EC+
Sbjct:   28 GANIASAAALALGTTSTLNI-QPASAIGPVKVPLEVLDYKAEICPPSKPIPGEKAMKGMRGLCVTVQAKLTENAPKDLEKVGVYGFVTDAVTSDSVLANNPDKSTDAGQFSMIESVTTKDKLVEFEFVAAV-PMEKDVSKEENGIGPLSFESLRIISFPGGQQYGAINPCEMNEFSDECE 205          
BLAST of mRNA_C-linearis_contig7.14488.1 vs. uniprot
Match: B8BWP2_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BWP2_THAPS)

HSP 1 Score: 134 bits (338), Expect = 9.150e-35
Identity = 66/154 (42.86%), Postives = 98/154 (63.64%), Query Frame = 0
Query:   99 AFGPIKMELTDPEYASVVCPPKTQVPGEKAGAGLKPVCVQVTVTANNPSPKEVVDAAVFGFVLDEEAT-SVVANNPDGASDAGQFAIIDKIPKGSSRVSFQFVAAIEPSENFDSKK-----LKFRSLKAISYAGGKQYGAITECEMNPLAAECD 246
            A GPIK+ + +P Y +  CPP   +PGEKA  G++ +CVQVT       PKE+    V+G+V D E + SV+ANNPD  +DAGQF +I+ +     +V F+F+AA+   ++  S +     L+F+SL+ IS+ GG+Q+GAI  CEMN  + EC+
Sbjct:   94 AVGPIKINILNPTYTAAPCPPSKPIPGEKAMKGMRGLCVQVTAELEELPPKELEKVGVYGYVNDAETSESVLANNPDSGTDAGQFGMIESVGIKDKKVEFEFIAAVPMEKDVTSYENGIGPLEFKSLRIISFPGGQQFGAINPCEMNEFSEECE 247          
BLAST of mRNA_C-linearis_contig7.14488.1 vs. uniprot
Match: A0A7S1DBN0_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DBN0_CYCTE)

HSP 1 Score: 131 bits (330), Expect = 8.560e-34
Identity = 70/170 (41.18%), Postives = 106/170 (62.35%), Query Frame = 0
Query:   84 AVSTAASMAVPQEAA-AFGPIKMELTDPEYASVVCPPKTQVPGEKAGAGLKPVCVQVTVTANNPSPKEVVDAAVFGFVLDEEA-TSVVANNPDGASDAGQFAIIDKIPKGSSRVSFQFVAAIEPSENFDSKK-----LKFRSLKAISYAGGKQYGAITECEMNPLAAECD 246
            AV  AA+  +P + A A GPIK+ L +P Y++  CPP   +PGEKA  G++ +CV V       +PK++    V+GFV D +   SV+ANNPD ++DAGQFA+++ +     +V+F FVAA+   ++    +     L F SL+ IS+ GG+QYGAI+ CEM+  + EC+
Sbjct:   58 AVVGAATTLLPSDPAQAVGPIKVALVNPVYSAQPCPPNRPIPGEKAMKGMRGLCVTVQADLETETPKDLDKVGVYGFVTDSDTGESVLANNPDLSTDAGQFAMVESVTTSDKKVTFDFVAAVPREKDISQYENGIGPLTFGSLRVISFPGGQQYGAISPCEMDEFSMECE 227          
BLAST of mRNA_C-linearis_contig7.14488.1 vs. uniprot
Match: A0A8J5XAI3_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XAI3_DIALT)

HSP 1 Score: 129 bits (323), Expect = 3.690e-33
Identity = 73/160 (45.62%), Postives = 90/160 (56.25%), Query Frame = 0
Query:   95 QEAAAFGPIKMELTDPEYASVVCPPKTQVP------GEKAGAGLKPVCVQVTVTANNPSPKEVVDAAVFGFVLDEEATSVVANNPDGASDAGQFAIIDKIPKGSSRVSFQFVAAIEPSENFDSKKLKFRSLKAISYAGGKQYGAITECEMNPLAAECDFD 248
            + A A GP  +EL+  EY  V CPP+          G  A  G+K  CV+VTVT  NPS K++ D+AVFG V +E   S+VANN DG +DAGQFA+I  I  G S   F FVA    +E     KL+F SLKAI+Y GG +Y     CE NP    C  D
Sbjct:   59 RRARAIGPTSVELSVKEYTEVACPPELAAGRIGGSLGAAASKGVKQRCVRVTVTGVNPSGKQLTDSAVFGRVFNEAGNSIVANNQDGRTDAGQFAMIPNIATGESTFDFVFVATDNQAE---MGKLRFESLKAIAYPGGDRYKVYDPCEQNPAMEGCGMD 215          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig7.14488.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JED9_9PHAE1.790e-11974.12Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YQZ7_9STRA1.160e-6059.41Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4D819_HETAK6.260e-4148.09Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2SGY2_9STRA7.860e-3744.62Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A1Z5J9N6_FISSO1.070e-3640.61Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
K0THP2_THAOC5.530e-3643.29Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S2KRJ0_9STRA2.220e-3542.22Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
B8BWP2_THAPS9.150e-3542.86Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S1DBN0_CYCTE8.560e-3441.18Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A8J5XAI3_DIALT3.690e-3345.63Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..248
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.527

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig7contigC-linearis_contig7:2531990..2534970 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig7.14488.1mRNA_C-linearis_contig7.14488.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig7 2531511..2535011 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig7.14488.1 ID=prot_C-linearis_contig7.14488.1|Name=mRNA_C-linearis_contig7.14488.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=249bp
MVPRVLGAIACGSCAVSAFVVPAVVRPSARQSDASSRHSSTIRQAPLMMA
GGGGGGRGAGGERNSQSRREVIAGVGKAMAAAVAVSTAASMAVPQEAAAF
GPIKMELTDPEYASVVCPPKTQVPGEKAGAGLKPVCVQVTVTANNPSPKE
VVDAAVFGFVLDEEATSVVANNPDGASDAGQFAIIDKIPKGSSRVSFQFV
AAIEPSENFDSKKLKFRSLKAISYAGGKQYGAITECEMNPLAAECDFD*
back to top