prot_C-linearis_contig7.14486.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig7.14486.1
Unique Nameprot_C-linearis_contig7.14486.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length1205
Homology
BLAST of mRNA_C-linearis_contig7.14486.1 vs. uniprot
Match: D8LQW0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQW0_ECTSI)

HSP 1 Score: 297 bits (761), Expect = 9.740e-81
Identity = 441/864 (51.04%), Postives = 494/864 (57.18%), Query Frame = 0
Query:  141 GPQAQAPSTTGAEGRLEEASGGDAEHLS-EAQGMALPAMPTVTRDPETPGFASIPGICSPPIPCHRGTDFGGGGQRAGGRLRVGVGVDEGVDDVCFAGGGCPPTAGGDARGGCGLCAADGDGGLSRGSGEI----SGSSRCGDEAGXXXXXXXXXXXXXAPLGCRGGRRRRQGRGRSSSGSGGRDFHACGGMM------GSGSRAEGSPERVASPSTWSGAHDTERTGRPT-RREQLLDASSAERFSEDL-----DEAGE-----AWVGAAG------RGISRRSGRGARKPVDEGEGETLIDFRGRMAAVASATRLCLAAGATAAPAIASTSVLATPPHPIPAATSAPPLPRRRLMMTASPKLXXXXXXXXXXXAGEDEYGDGDGLPPGPRNDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWTTPARRGKSQLEGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGRLALDPLAVALRPSEMTAPKTRPWPGFDGIRYDPPESKITTPLRRSDWVVPHGSAMQALAAALNEAAGSAACSSPLDMREERRRSIRQRYRERAEHFRLIQAARESSACKGSAMLAVMRQKXXXXXXXXXXXXXXXXXXXRLKEKMLMRMLEGRRRVFRAWARRAVLCRKAREMLQSREASRQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRELAIKQSALARSALSGLAGARCRFVRWKAWAARGAAAKRMSRRTRQAGLRRCFLALANIQLKLRRRLEERRAAALAAAFRGWRVGLGRLLRARL 976
            GP    PST          +G D EHL  E +G A P  P V R P+TPG+AS P ICSPP P HRG   G G  RA  RL +G+               C   +GG  R                G G       G   C D +G             A    R  R RR+ R      +   D  +CGG        G G+   G     +  S  S A D+ R  R T R+EQLL+ASS+ERFSED       E G      AW GA        RG+SRR       PV   + ETLIDF+GRMAA+ASATRL                                               XXXXXXXXXXX                     XXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXX                 XXXXXXXXXXXXXXXXXXXX                    GR A+ PL   L+PSE TAPKTRPWP F+ IRY+PPES ITTPLRRSDW VPHGSAM ALAAAL+EAAGS ACSSPLDMR+E R S+R+RY+ERA+HFRLIQAARE+SA KGSAML  MRQ+                    +KE++LM MLEGR+  F AWA+    CR AR++++ R  S  L              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      ++SALARSALSGLAG R RFVRW+AWA R AAA+RM+ R R+A L+RCFLALA  QL+LR+RLE+RR AALAA F+GWRVGLGRLLRARL
Sbjct:   64 GPGQPTPSTPRVGQHRSRPTGTDGEHLPPETRGAAFPMTPKVARGPDTPGYASTPCICSPPAPLHRGIT-GSGKPRASSRLSIGID--------------CSGPSGGSGRPXXXXXXXXXXXXXXGGQGLAPEWAEGEEDC-DRSGTPAAAAV------AAAARRPARARRKCRLNQRKPNLADDSDSCGGSTTEADADGDGAETSGGLRDGSQSSAGSRAADSCRRERSTNRKEQLLNASSSERFSEDFCGRGGQEGGAGQGLGAWAGAGAEACPKERGVSRRXXXXX-XPVVRQDEETLIDFKGRMAAIASATRLXX-------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVATARLDGGVTASPKREGAAGRSAVRPLRTTLKPSERTAPKTRPWPDFERIRYEPPESAITTPLRRSDWKVPHGSAMHALAAALDEAAGSTACSSPLDMRQEGRESVRRRYQERADHFRLIQAARETSAGKGSAMLLAMRQRRQAEEDALRAAREREARAAWIKERILMHMLEGRKAAFLAWAKHTRACRNARQVVKWRTDSLSLRVLTAWRGEANRSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKSALARSALSGLAGTRGRFVRWRAWARRRAAARRMALRAREAWLQRCFLALAGNQLRLRQRLEDRRMAALAAVFQGWRVGLGRLLRARL 867          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig7.14486.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQW0_ECTSI9.740e-8151.04Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 740..767

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig7contigC-linearis_contig7:2492694..2500824 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig7.14486.1mRNA_C-linearis_contig7.14486.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig7 2492562..2502103 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig7.14486.1 ID=prot_C-linearis_contig7.14486.1|Name=mRNA_C-linearis_contig7.14486.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1205bp
MKSPPAPVRAGRGRPTKPKTQASGVPRTPAGSGAGAGGAVPGGHGLLPPP
AIQREARSGFLKGGKSRSTDSAGSGGGRSTGGVRMAGRLPASRRHSPVPP
QLFIFGASSSSSSGGGGGGGGGGSGSGSEAGGPCPQTPGSGPQAQAPSTT
GAEGRLEEASGGDAEHLSEAQGMALPAMPTVTRDPETPGFASIPGICSPP
IPCHRGTDFGGGGQRAGGRLRVGVGVDEGVDDVCFAGGGCPPTAGGDARG
GCGLCAADGDGGLSRGSGEISGSSRCGDEAGRCSGSGGDTGGDGAPLGCR
GGRRRRQGRGRSSSGSGGRDFHACGGMMGSGSRAEGSPERVASPSTWSGA
HDTERTGRPTRREQLLDASSAERFSEDLDEAGEAWVGAAGRGISRRSGRG
ARKPVDEGEGETLIDFRGRMAAVASATRLCLAAGATAAPAIASTSVLATP
PHPIPAATSAPPLPRRRLMMTASPKLQPPPPAAATAPAGEDEYGDGDGLP
PGPRNDAANGNGNGNVNGNYSYTGGGGAISSNANAGDAGASRSSCSSCPA
SASSAASLASASLASAWTTPARRGKSQLEGGAGGGSGVGRASAAVNVSRE
TPTPATGGGHRGGGWRGRGRGLGRLALDPLAVALRPSEMTAPKTRPWPGF
DGIRYDPPESKITTPLRRSDWVVPHGSAMQALAAALNEAAGSAACSSPLD
MREERRRSIRQRYRERAEHFRLIQAARESSACKGSAMLAVMRQKRQAEED
ERRARELREAREARLKEKMLMRMLEGRRRVFRAWARRAVLCRKAREMLQS
REASRQLRLLLAWREEARRARRAREFVIEQVSGSKRATFMTWRSSARKSA
AAKKMALAHLRGSQKACFCAWRDTTRGNVRRRELAIKQSALARSALSGLA
GARCRFVRWKAWAARGAAAKRMSRRTRQAGLRRCFLALANIQLKLRRRLE
ERRAAALAAAFRGWRVGLGRLLRARLLPAEGDDDDSQGDGGGDRGKRVTG
GGGGGGRVAGECDSAVVVKVPDRSAPISSARSQGWGFAPPAPERLAGLEG
DAEKVEDREQSRQGEERPPACTASRLGGGEAGGGDDGEGDGGAVGAWAGG
CEREAASPNWDARPVVLLPPSAFFVSASCAVTGVLVPSPQVTVPLPTREV
GGASEEAASVAAKGAGGEDVVGGSRGASRSGRRRRRKRRKEDGGDSGGDK
RAGK*
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