prot_C-linearis_contig7.14470.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig7.14470.1
Unique Nameprot_C-linearis_contig7.14470.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length190
Homology
BLAST of mRNA_C-linearis_contig7.14470.1 vs. uniprot
Match: D7FZB4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZB4_ECTSI)

HSP 1 Score: 260 bits (665), Expect = 4.140e-86
Identity = 145/195 (74.36%), Postives = 156/195 (80.00%), Query Frame = 0
Query:    1 MLRSGVKALASRS-ASVPFRVPYDRVCTAGERLGRKGVERVVGQGS-----RGMMAGPKAKPGKIKKGRSGKALDRKTVTLLKLLDAQPEPMPELSPEENQRNFDIGRRYNSKMATSHNERMADLTTKIKLRDDAIAHLPELLQHAARQPDRNPPPLNRRVATYTPPIPGFDKKKAGLSVDDEAEAQLDRFRGGY 189
            MLR  V  L+ RS A+   R  +  VC AG+RL R    R  G G      RGMM    AKPGKIKK RSGKALD+KT+TLLKLLDA+PEPMPELS EE QRNFDIGRRYNSKMATSHNERMADLTTKIKLRDDAIAHLPELLQHAARQPDRNPPPLNRRVATYTPPIPGFDKK  GLS D++A+AQL+RFR GY
Sbjct:    1 MLRPAVSTLSGRSVAAAVSRRSFPGVCAAGDRLERS---RTAGSGGVVGCRRGMMMA--AKPGKIKKERSGKALDKKTMTLLKLLDARPEPMPELSAEEKQRNFDIGRRYNSKMATSHNERMADLTTKIKLRDDAIAHLPELLQHAARQPDRNPPPLNRRVATYTPPIPGFDKKDYGLSDDEDADAQLNRFRDGY 190          
BLAST of mRNA_C-linearis_contig7.14470.1 vs. uniprot
Match: A0A7S2IRI2_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2IRI2_9EUKA)

HSP 1 Score: 61.6 bits (148), Expect = 1.030e-8
Identity = 35/74 (47.30%), Postives = 41/74 (55.41%), Query Frame = 0
Query:  104 YNSKMATSHNERMADLTTKIKLRDDAIAHLPELLQHAARQPDRNPPPLNRRVATYTPPIPGFDKKKAGLSVDDE 177
            Y+      H+   A LT  I+LR+ AIA LPE LQH ARQPD    P+ RR+ T T PIP F  K      DDE
Sbjct:   80 YSRAKMHEHHRVNAHLTKMIRLREAAIAALPEALQHEARQPDYTTLPIQRRIFTETAPIPDFQLKLLKRPGDDE 153          
BLAST of mRNA_C-linearis_contig7.14470.1 vs. uniprot
Match: A0A7S1DZY1_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DZY1_HEMAN)

HSP 1 Score: 60.1 bits (144), Expect = 2.770e-8
Identity = 43/107 (40.19%), Postives = 59/107 (55.14%), Query Frame = 0
Query:   60 KKGRSGKALDRKTVTLLKLLDAQPEPMPELSPEENQRNFDIGRRYNSKMATSHNERMADLTTKIKLRDDAIAHLPELLQHAARQPDRNPPPLNRRVATYTPPIPGFD 166
            KKG+S K LD K +   K+L+A+ E     S E+   + +I + +  +    H E+   LT KI+LRD AIA LPE LQ   +  D    PL+R + T  PPI GFD
Sbjct:   18 KKGKS-KGLDGKFLVHAKVLEARGEERYVRSEEQMGLDTEIAKEFARQSMKRHIEQQKWLTRKIRLRDQAIAALPEELQAEGKSMDEESFPLDRHIWTDFPPIKGFD 123          
BLAST of mRNA_C-linearis_contig7.14470.1 vs. uniprot
Match: A0A1S4BHU9_TOBAC (uncharacterized protein LOC107808434 n=12 Tax=Solanaceae TaxID=4070 RepID=A0A1S4BHU9_TOBAC)

HSP 1 Score: 62.0 bits (149), Expect = 2.780e-8
Identity = 38/107 (35.51%), Postives = 61/107 (57.01%), Query Frame = 0
Query:   76 LKLLDAQPEPMPELSPEENQRNFDIGRRYNSKMATSHNERMADLTTKIKLRDDAIAHLPELLQHAARQPDRNPPPLNRRVATYTPPIPGFDKKKAGLSVDDEAEAQL 182
            L L+D +  P  E++ E+ +R   + + Y+  +   H +R A  TT ++L+ +AI  LPE L+ AA  PD  P P+NR +AT TPPI G+ +K    +    A+ +L
Sbjct:  139 LGLVDVEKLPKYEMTVEDGRR---LAKEYSRVLMRKHRQRQAAETTLLRLKKEAIEALPENLKAAALVPDLTPFPVNRFMATLTPPIEGYIEKVKEAAKKSSAKEKL 242          
BLAST of mRNA_C-linearis_contig7.14470.1 vs. uniprot
Match: A0A445ACG8_ARAHY (Uncharacterized protein n=3 Tax=Arachis TaxID=3817 RepID=A0A445ACG8_ARAHY)

HSP 1 Score: 61.6 bits (148), Expect = 3.790e-8
Identity = 37/93 (39.78%), Postives = 56/93 (60.22%), Query Frame = 0
Query:   76 LKLLDAQPEPMPELSPEENQRNFDIGRRYNSKMATSHNERMADLTTKIKLRDDAIAHLPELLQHAARQPDRNPPPLNRRVATYTPPIPGFDKK 168
            L L+D +  P  EL+ E+ ++   + + Y+  +   H ER A  TT ++L+ +AI  LPE L+ AA  PD  P P+NR +AT TPPI G+ +K
Sbjct:  138 LGLVDEEKIPKYELTVEDGRK---LAKEYSRVLMRKHRERQAKETTLLRLKKEAIEALPEGLREAALVPDLTPFPVNRFMATLTPPIEGYMEK 227          
BLAST of mRNA_C-linearis_contig7.14470.1 vs. uniprot
Match: A0A834YQV3_9MAGN (Uncharacterized protein n=1 Tax=Tetracentron sinense TaxID=13715 RepID=A0A834YQV3_9MAGN)

HSP 1 Score: 61.6 bits (148), Expect = 4.100e-8
Identity = 38/93 (40.86%), Postives = 56/93 (60.22%), Query Frame = 0
Query:   76 LKLLDAQPEPMPELSPEENQRNFDIGRRYNSKMATSHNERMADLTTKIKLRDDAIAHLPELLQHAARQPDRNPPPLNRRVATYTPPIPGFDKK 168
            L L+DA+  P  EL+ E+ +R   + + Y+  +   H  R A  TT ++L+ +AI  LPE L+ AA  PD  P P+NR +AT TPPI G+ +K
Sbjct:  146 LGLVDAEDVPKYELTVEDGRR---LAKEYSRALMRRHRARRAAETTLLRLKKEAIEALPENLKAAALVPDLTPFPVNRFMATLTPPIEGYIEK 235          
BLAST of mRNA_C-linearis_contig7.14470.1 vs. uniprot
Match: A0A1U8DSZ5_CAPAN (uncharacterized protein LOC107839242 n=4 Tax=Capsicum TaxID=4071 RepID=A0A1U8DSZ5_CAPAN)

HSP 1 Score: 61.2 bits (147), Expect = 5.120e-8
Identity = 39/107 (36.45%), Postives = 60/107 (56.07%), Query Frame = 0
Query:   76 LKLLDAQPEPMPELSPEENQRNFDIGRRYNSKMATSHNERMADLTTKIKLRDDAIAHLPELLQHAARQPDRNPPPLNRRVATYTPPIPGFDKKKAGLSVDDEAEAQL 182
            L L+D +  P  EL+ E+ +R   + + Y+  +   H +R A  TT ++L+ +AI  LPE L+ AA  PD  P P+NR +AT TPPI G+  K    +    A+ +L
Sbjct:  136 LGLVDVEKLPKYELTVEDGRR---LAKAYSRVLMRKHRQRQAAETTLLRLKKEAIEALPENLKTAALVPDYTPFPVNRFMATLTPPIEGYLDKVMEAAKKSSAKEKL 239          
BLAST of mRNA_C-linearis_contig7.14470.1 vs. uniprot
Match: A0A6A6MZK8_HEVBR (Uncharacterized protein n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=A0A6A6MZK8_HEVBR)

HSP 1 Score: 60.5 bits (145), Expect = 7.100e-8
Identity = 37/95 (38.95%), Postives = 55/95 (57.89%), Query Frame = 0
Query:   76 LKLLDAQPEPMPELSPEENQRNFDIGRRYNSKMATSHNERMADLTTKIKLRDDAIAHLPELLQHAARQPDRNPPPLNRRVATYTPPIPGFDKKKA 170
            L L+D    P  EL+ E+ +R   + + Y+  +   H  R A  +T ++L+ +AI  LPE L+ AA  PD  P P+NR +AT TPPI G+ +K A
Sbjct:  108 LGLVDVDKIPKYELTEEDGKR---LAKEYSRVLMRKHRARQAAESTLLRLKKEAIEALPEKLKQAALVPDLTPFPVNRFMATLTPPIEGYIEKTA 199          
BLAST of mRNA_C-linearis_contig7.14470.1 vs. uniprot
Match: A0A067LPK2_JATCU (Uncharacterized protein n=1 Tax=Jatropha curcas TaxID=180498 RepID=A0A067LPK2_JATCU)

HSP 1 Score: 60.1 bits (144), Expect = 1.370e-7
Identity = 37/93 (39.78%), Postives = 55/93 (59.14%), Query Frame = 0
Query:   76 LKLLDAQPEPMPELSPEENQRNFDIGRRYNSKMATSHNERMADLTTKIKLRDDAIAHLPELLQHAARQPDRNPPPLNRRVATYTPPIPGFDKK 168
            L L+DA   P  EL+ E+ +R   + + Y+  +   H  R A  +T ++L+ +AI  LPE L+ AA  PD  P P+NR +AT TPPI G+ +K
Sbjct:  139 LGLVDADKIPKYELTEEDGKR---LAKEYSRVLMRKHRARQAAESTLLRLKKEAIEALPEKLKAAALVPDLTPFPVNRFMATLTPPIEGYIEK 228          
BLAST of mRNA_C-linearis_contig7.14470.1 vs. uniprot
Match: B9SB38_RICCO (Uncharacterized protein n=1 Tax=Ricinus communis TaxID=3988 RepID=B9SB38_RICCO)

HSP 1 Score: 60.1 bits (144), Expect = 1.380e-7
Identity = 36/93 (38.71%), Postives = 56/93 (60.22%), Query Frame = 0
Query:   76 LKLLDAQPEPMPELSPEENQRNFDIGRRYNSKMATSHNERMADLTTKIKLRDDAIAHLPELLQHAARQPDRNPPPLNRRVATYTPPIPGFDKK 168
            L L+DA+  P  EL+ E+ +R   + + Y+  +   H  R A  +T ++L+ +AI  LP+ L+ AA  PD  P P+NR +AT TPPI G+ +K
Sbjct:  140 LGLVDAEKIPKYELNEEDGKR---LAKEYSRVLMRKHRARQAAESTLLRLKKEAIDALPDKLKEAALVPDLTPFPVNRFMATLTPPIEGYIEK 229          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig7.14470.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZB4_ECTSI4.140e-8674.36Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2IRI2_9EUKA1.030e-847.30Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A7S1DZY1_HEMAN2.770e-840.19Hypothetical protein n=2 Tax=Hemiselmis andersenii... [more]
A0A1S4BHU9_TOBAC2.780e-835.51uncharacterized protein LOC107808434 n=12 Tax=Sola... [more]
A0A445ACG8_ARAHY3.790e-839.78Uncharacterized protein n=3 Tax=Arachis TaxID=3817... [more]
A0A834YQV3_9MAGN4.100e-840.86Uncharacterized protein n=1 Tax=Tetracentron sinen... [more]
A0A1U8DSZ5_CAPAN5.120e-836.45uncharacterized protein LOC107839242 n=4 Tax=Capsi... [more]
A0A6A6MZK8_HEVBR7.100e-838.95Uncharacterized protein n=1 Tax=Hevea brasiliensis... [more]
A0A067LPK2_JATCU1.370e-739.78Uncharacterized protein n=1 Tax=Jatropha curcas Ta... [more]
B9SB38_RICCO1.380e-738.71Uncharacterized protein n=1 Tax=Ricinus communis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR03914539S ribosomal protein L40, mitochondrialPANTHERPTHR1335939S RIBOSOMAL PROTEIN L40, MITOCHONDRIALcoord: 73..169
NoneNo IPR availablePANTHERPTHR13359:SF239S RIBOSOMAL PROTEIN L40, MITOCHONDRIALcoord: 73..169

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig7contigC-linearis_contig7:2302866..2304608 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig7.14470.1mRNA_C-linearis_contig7.14470.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig7 2301929..2304656 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig7.14470.1 ID=prot_C-linearis_contig7.14470.1|Name=mRNA_C-linearis_contig7.14470.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=190bp
MLRSGVKALASRSASVPFRVPYDRVCTAGERLGRKGVERVVGQGSRGMMA
GPKAKPGKIKKGRSGKALDRKTVTLLKLLDAQPEPMPELSPEENQRNFDI
GRRYNSKMATSHNERMADLTTKIKLRDDAIAHLPELLQHAARQPDRNPPP
LNRRVATYTPPIPGFDKKKAGLSVDDEAEAQLDRFRGGY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039145MRPL40