prot_C-linearis_contig112.1535.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig112.1535.1
Unique Nameprot_C-linearis_contig112.1535.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length800
Homology
BLAST of mRNA_C-linearis_contig112.1535.1 vs. uniprot
Match: A0A6H5KXC9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXC9_9PHAE)

HSP 1 Score: 491 bits (1265), Expect = 3.120e-157
Identity = 466/996 (46.79%), Postives = 520/996 (52.21%), Query Frame = 0
Query:    1 MQASPP--LRLSVEERVDQAVREAVRRALANQRRTQEEELDALSDVLQRSLAALAGERXXXXXXXXXXXXRRRDMVEELSELLGGELSCGDVSRLAMGLERIEREQQTAAG---EGEGGXXXXXXXXPKGRAWVLEV------------------------------------------------------------------------------------------------------KRVEQLEALMAEVRAGKGRKRAAVSSRPGAXXXXXXXXXXXXXXXEKDDGVGDTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFPSSGQDG--NDGAQAGGPETPAV--AGDGA-CAQE------NPDLAATVPVDPPDSSADGN-----GAVGTGRDAGLLARTDEKRHPVFENGXXXXXXXXXXGGLTAQARTSAGSGVILAGAASASKEAERWKMAARRSEAALADLRETLGDVLALSFRCGQESARRR-EGEQRPCSESGDTSLGGQDDVVGGVVAKXXXXXXXXXXXXXVS--ESAEGGSGRSGESCCGTGLS------------------SLCEAKAAAAEELLKRLETLSVDQGSDIARLEASLR-----SGAPRAKV--------SRRGDSGGAGEEKSAAGAAGPGAERVAIMTLSSPALDAAGADATTGAATAAKIQVGECGLPWGEGLDREREREGGRRSRGACPPADIRTEWE---------------------------ELEGLDTYLAHYQGGGGLGSQAVQSVLDRWIDVNKRSILEGWLGHVLHGGPVDAANGNFVPRVQMSSLSKEVRDGLVSVVLPLLLARRGVLLQVLTRERVELVHDIQIRVTPVAGRREGPHTTGXXXXXXXXXXXXXXXXXXADEREHGARIRDMVMKAAHVGYVEEDEG-----RGGGEGAAAWRTPLASVDSLSRQLKDTWENFNANLAAMGTEPVRTGDR------GGSGGG--RMLPEY 799
            M+A PP  LRLSVEERV+ AV  AVRRALA QR+TQE+ELD+LS+VLQRSLAALAGERXXXXXXXXXXXXRRR+M+EEL+ LLGGELSCGDVSRLAMGLERIERE   AA    EG+GG         +GRAWVLE                                                                                                       +RVEQLEAL  EVR G+ +KRAAV +  G      XXXXXXXXXX           XXXXXXXXXXXXXXXXXXXXX       S PS  Q+G  +   +AG P   +V   GDG  CA E          AAT P D  +++AD       G    GR A                           G   + A    G        +  S E ERWKMAARRSEA+L+DLR+ LG VLALSF CG+ESARRR EG++    E+G   L       GG V K             V+  E  E  +  +                            S  EAKAAA + LLKRLE L+VDQG DIARLEASL+     S  P A          S RGD GG   E+SA  AAG  A+ V+   L SPA  AA       A    + Q G  G+  GE   R      GR SR A P  DIRT+WE                           EL+GLDT+L HYQGGGGLGSQAVQ VLDRWIDV+KR+ILEGWLGHVLHGGPVD+ANG+FVPRVQ+SSLSKEVRDG+VSVVLPLLL RRGVLLQVLTRERVELVHD+QIRVTPVAGRR+ P +                      EREHGARIRDMVMKAAHVGYVEEDEG            AAWRTPLASVDSLSRQLKDTWE FNAN A M  E    G        G S GG  RMLPEY
Sbjct:    1 MEARPPVPLRLSVEERVEHAVSSAVRRALAEQRKTQEQELDSLSNVLQRSLAALAGERXXXXXXXXXXXXRRRNMIEELTSLLGGELSCGDVSRLAMGLERIEREAGPAAASEEEGDGGQE-------RGRAWVLEQVRQCLFAKVAVQDQLRSSADEIAADMFEAEEGLMGFQVGPGGGQDAEGASPISRPPPPTDVAVAAVGPGADGGALWSARSESVARARASASEALATSLRLARRRVEQLEALALEVRRGERKKRAAVVALAGVGEGGGXXXXXXXXXXXXX-------XXXXXXXXXXXXXXXXXXXXXXASSDGSLSRPSCSQEGAVDRAEEAGRPAAGSVEPGGDGGTCAAEATAEGERTGAAATRPAD--EAAADKQAQEPRGGATAGRTASXXXXXXXXXXXPLHPVKTDHASDGGKGASVSLAAAPGGGDAQPPPVSPESCEVERWKMAARRSEASLSDLRKNLGSVLALSFMCGEESARRRGEGKE----EAGGVRL-----AAGGEVDKEAGCGDPDSVLGVVAGLERVEDAAAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXFSPGEAKAAAVDVLLKRLEALTVDQGGDIARLEASLQALRGSSATPTAGAAGVSSSGNSGRGDLGGNAHEESAQAAAGLKADDVSDPKLHSPAAAAAAV-----APRGEREQEG--GVSKGEAGRR------GRGSRDASPKRDIRTDWEIEYINRWHAWPPYSSAIGSKVIGVVQQELDGLDTHLGHYQGGGGLGSQAVQGVLDRWIDVSKRNILEGWLGHVLHGGPVDSANGSFVPRVQLSSLSKEVRDGMVSVVLPLLLGRRGVLLQVLTRERVELVHDVQIRVTPVAGRRDAPPSA--RASLGGGGGSRWRPAPPVGEREHGARIRDMVMKAAHVGYVEEDEGGXXXXXXXXXXQAAWRTPLASVDSLSRQLKDTWETFNANFATMAGESRGEGGAAVGGWAGNSRGGAPRMLPEY 956          
BLAST of mRNA_C-linearis_contig112.1535.1 vs. uniprot
Match: D8LD17_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD17_ECTSI)

HSP 1 Score: 469 bits (1207), Expect = 1.560e-150
Identity = 420/868 (48.39%), Postives = 463/868 (53.34%), Query Frame = 0
Query:    1 MQASPP--LRLSVEERVDQAVREAVRRALANQRRTQEEELDALSDVLQRSLAALAGERXXXXXXXXXXXXRRRDMVEELSELLGGELSCGDVSRLAMGLERIEREQQTAAGEGEGGXXXXXXXXPKGRAWVLEVKRVEQLEALMAEVRAGKGRKRAAVSSRPGAXXXXXXXXXXXXXXXEKDDGVGD-TGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFPSSGQDGNDGAQAGGPETPAV---------------------AGDGACAQENPDLAAT--VPVDPPDSSADGNGAVGTGRDAGLLARTDEKRHPVFENGXXXXXXXXXXGGLTAQARTSAGSGVILAGAASASK-EAERWKMAARRSEAALADLRETLGDVLALSFRCGQESARRREGEQ-----RPCSESG---DTSLGGQDDVVGGVVA-KXXXXXXXXXXXXXVSESA-EGGSGRSGESCCGTGLSSLCEAKAAAAEELLKRLETLSVDQGSDIARLEASLR-----SGAPRAK------VSRRGDSG-----GAGEEKSAAGAAGPGAERVAIMTLSSPALDAAGADATTGAATAAKIQVGECGLPWGEGLDREREREGGRRSRGACPPADIRTEWEELEGLDTYLAHYQGGGGLGSQAVQSVLDRWIDVNKRSILEGWLGHVLHGGPVDAANGNFVPRVQMSSLSKEVRDGLVSVVLPLLLARRGVLLQVLTRERVELVHDIQIRVTPVAGRREGPHTTGXXXXXXXXXXXXXXXXXXADEREHGARIRDMVMKAAHVGYVEEDEG-------RGGGEGAAAWRTPLASVDSLSRQLKDTWENFNANLAAMGTEPVRTGDRGGSG--------GGRML-PEY 799
            M+A PP  LRLSVEERV+ AV  AVRRALA QR+TQEEELD+LSDVLQRSLAALAGER XXXXXXXXXXXRRRDM+EEL+ LLGGELSCGDVSRLAMGLERIERE    AG     XXXXXXX  +GRAWVLE  RVEQLEAL  EVR G+G+KRAA  +  G                E  DG+ D    XXXXXXXX                    SFPS  Q+G                                    G GA A    D AA      +P   +  G  A   G D         K     + G           G + +   + G G     AAS+   E ERW++AARRSEA+LADLRETLG VLALSF CG+ESARRR  E+     R  +E G   +   G  D V+G V A +             VSE A EG  G S  +  G    S  EAKA+A + LLKRLE LSVDQG DIARLE SL+     S  P A       VS  GDSG     G+  E+SA  AAG  AE V+   L SPA  AA             +  GE G             +GGR SR A P  DIRTEWEEL+GLDT+L HYQGGGGLGSQAVQ VLDRWIDV                                       RDG+VSVVLPLLL RRGVLLQVLTRERVELVHD+QIRVTPVAGRR+ P +                      EREHGARIRDMVMKAAHVGYVEEDEG              AAWRTPLASVDSLSRQLKDTWE FNAN A M  E    G   G G        G RML PEY
Sbjct:    1 MEARPPVPLRLSVEERVEHAVSSAVRRALAEQRKTQEEELDSLSDVLQRSLAALAGERDXXXXXXXXXXXRRRDMIEELTSLLGGELSCGDVSRLAMGLERIERE----AGPAAAXXXXXXXXQERGRAWVLE--RVEQLEALALEVRRGEGKKRAAAVALAGVGEGGGAGEAVESG--EPADGLDDGXXXXXXXXXXXDRAVEGVGGAGASASSDGSWSFPSCSQEGTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGTGAAATRPADEAAADKQAQEPRGGATAGRTASSGGADDDGCPLLPVKADHASDGGE----------GTSGRLVAAPGGGDAQPPAASSEPGEVERWRVAARRSEASLADLRETLGSVLALSFMCGEESARRRGKEEEAGGVRLPTEGGVDKEAGCGDPDSVLGVVAALERVGDAAAAAAESSVSEEAVEGTGGTSVGTSRGRERFSPGEAKASAVDVLLKRLEALSVDQGGDIARLETSLQALRGSSATPTAATAGAAGVSSLGDSGRVDLGGSAREESAQAAAGLKAEDVSDPKLHSPAAAAAAVAPRGEGDHEGGVSKGEAG-------------QGGRGSRDASPKRDIRTEWEELDGLDTHLGHYQGGGGLGSQAVQGVLDRWIDV---------------------------------------RDGMVSVVLPLLLGRRGVLLQVLTRERVELVHDVQIRVTPVAGRRDAPPSA--RTSLGGGGGSRWRPAPPVGEREHGARIRDMVMKAAHVGYVEEDEGGXXXXXXXXXXXXQAAWRTPLASVDSLSRQLKDTWETFNANFATMAGESREDGGAAGGGWAGDSRGGGPRMLLPEY 796          
BLAST of mRNA_C-linearis_contig112.1535.1 vs. uniprot
Match: A0A7S2V056_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V056_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 8.780e-7
Identity = 41/140 (29.29%), Postives = 62/140 (44.29%), Query Frame = 0
Query:  619 GPVDAANGNFVPRVQMSSLSKEVRDGLVSVVLPLLLARRGVLLQVLTRERVELVHDIQIRVTPV------------------AGRREGPH--TTGXXXXXXXXXXXXXXXXXXADEREHGARIRDMVMKAAHVGYVEEDE 738
            G V      F P +Q+S LS EVR+G +S++LPLLL R+ + + +  R+R E+++D++I V PV                      + PH  T                    A E  HG +   +  +AAH GY  +DE
Sbjct:    1 GDVRKRGPQFAPALQISRLSHEVREGFLSLILPLLLRRKDIEVNLSLRQRREVLYDLRILVQPVNPVMSAPPSYSQVDLLGHPADVDSPHSSTGDLILLPTGAEAPPPTATAAAAENAHGVKAARLAARAAHSGYCADDE 140          
BLAST of mRNA_C-linearis_contig112.1535.1 vs. uniprot
Match: A0A7S2U813_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U813_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 5.070e-5
Identity = 40/130 (30.77%), Postives = 65/130 (50.00%), Query Frame = 0
Query:  566 TEWEELEG-LDTYLAHYQGGGGLGSQAVQSVLDRWIDV-NKRSILEGWLGHVLHGGPVDAANGNFVPRVQMSSLSKEVRDGLVSVVLPLLLARRGVLLQVLTRERVELVHDIQIRVTPVAGRREGPHTTG 693
            TEW++L   L     H     GL S  V ++L +W D  N  S L  W+  +L+G      +   VP +++SSL  ++RDG    +LPLLL R  + ++V TR      +D+ + ++     R+G  + G
Sbjct:   25 TEWDDLAPPLPPPPDH-----GLRSPIVDALLSQWTDDGNMHSSLISWIESILNG-----KDPGTVPPLKISSLDHQIRDGFSMHILPLLLRRSDIHVEVTTRAHRRTTYDLAVSISQSKPSRDGAVSFG 144          
BLAST of mRNA_C-linearis_contig112.1535.1 vs. uniprot
Match: A0A7S1YQ90_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YQ90_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 9.650e-5
Identity = 36/104 (34.62%), Postives = 57/104 (54.81%), Query Frame = 0
Query:  586 GLGSQAVQSVLDRWI-DVNKRSILEGWLGHVLHGGPVDAANGNFVPRVQMSSLSKEVRDGLVSVVLPLLLARRGVLLQVLTRERVELVHDIQIRVTPVAGRREG 688
            GL S  V ++L +W  D    + L  W+ H+L+G   D +N   +P +++SSL  ++RDG    +LPLLL R  V + V TR   +  +D+ + VTP     +G
Sbjct:  100 GLRSPIVDALLSQWTTDKKMHATLLSWIEHILNGE--DVSN---IPPLKISSLDHQMRDGFTMHILPLLLRRSDVHVDVTTRVHRKTTYDLAVSVTPSESAYKG 198          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig112.1535.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KXC9_9PHAE3.120e-15746.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LD17_ECTSI1.560e-15048.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2V056_9STRA8.780e-729.29Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S2U813_9STRA5.070e-530.77Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A7S1YQ90_9STRA9.650e-534.62Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 24..44
NoneNo IPR availableCOILSCoilCoilcoord: 331..351

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig112contigC-linearis_contig112:325032..339092 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig112.1535.1mRNA_C-linearis_contig112.1535.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig112 323653..339092 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig112.1535.1 ID=prot_C-linearis_contig112.1535.1|Name=mRNA_C-linearis_contig112.1535.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=800bp
MQASPPLRLSVEERVDQAVREAVRRALANQRRTQEEELDALSDVLQRSLA
ALAGERDRALRSLAAEEDRRRDMVEELSELLGGELSCGDVSRLAMGLERI
EREQQTAAGEGEGGGEGEGGGEPKGRAWVLEVKRVEQLEALMAEVRAGKG
RKRAAVSSRPGAGAGAGAGAGAAVEEEEKDDGVGDTGADDGAAGGTAAGE
TVEAGGTGGSCSGGSCSFPSSGQDGNDGAQAGGPETPAVAGDGACAQENP
DLAATVPVDPPDSSADGNGAVGTGRDAGLLARTDEKRHPVFENGGGGGGG
EDTSGGLTAQARTSAGSGVILAGAASASKEAERWKMAARRSEAALADLRE
TLGDVLALSFRCGQESARRREGEQRPCSESGDTSLGGQDDVVGGVVAKGG
HVDGGSHVEGGVSESAEGGSGRSGESCCGTGLSSLCEAKAAAAEELLKRL
ETLSVDQGSDIARLEASLRSGAPRAKVSRRGDSGGAGEEKSAAGAAGPGA
ERVAIMTLSSPALDAAGADATTGAATAAKIQVGECGLPWGEGLDRERERE
GGRRSRGACPPADIRTEWEELEGLDTYLAHYQGGGGLGSQAVQSVLDRWI
DVNKRSILEGWLGHVLHGGPVDAANGNFVPRVQMSSLSKEVRDGLVSVVL
PLLLARRGVLLQVLTRERVELVHDIQIRVTPVAGRREGPHTTGGGRIASA
AAAAAGRRRPPADEREHGARIRDMVMKAAHVGYVEEDEGRGGGEGAAAWR
TPLASVDSLSRQLKDTWENFNANLAAMGTEPVRTGDRGGSGGGRMLPEY*
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