prot_C-linearis_contig112.1533.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig112.1533.1
Unique Nameprot_C-linearis_contig112.1533.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length271
Homology
BLAST of mRNA_C-linearis_contig112.1533.1 vs. uniprot
Match: D8LD13_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD13_ECTSI)

HSP 1 Score: 409 bits (1052), Expect = 2.280e-142
Identity = 180/214 (84.11%), Postives = 192/214 (89.72%), Query Frame = 0
Query:   57 NFPSQKWHSSFCCAGGIKSLYGLCVPCAGATARHRLDGSSWCVNAMCLTPCAARNIVRHGYGIKGHCGADICCSLVCAPCVACQLLGETEKRGGIHGEWSESSARPRFEQPWKFGLFNCMDDLRTCSYGFCCPMPAIGTVRTQMDDSDWIFNCLCFNPFIARSFVRQSYNIEGTDIADCALTCFCFPCSITQMLNETQHRGNITGSPGFNSVER 270
            + PSQKWHS+ CCAGGIKSLYGLCVPC  ATARHRLDGSSWCVNAMCL+PCAARNIVRHGYGIKGHC ADI CSLVCAPCV CQLLGETEKRG ++  W++ SAR R EQPWKFGLFNC+DD  TCSYGF CPMPA+GT+RTQMDDSDWIFNCLC NPFIARS VRQSYNIEGTD ADC LTC CFPCSITQMLNETQHRGN+TG PGFN+VER
Sbjct:   61 DLPSQKWHSAVCCAGGIKSLYGLCVPCGLATARHRLDGSSWCVNAMCLSPCAARNIVRHGYGIKGHCCADILCSLVCAPCVTCQLLGETEKRGCVYDSWNDQSARSRREQPWKFGLFNCLDDCTTCSYGFFCPMPAVGTIRTQMDDSDWIFNCLCINPFIARSLVRQSYNIEGTDSADCLLTCCCFPCSITQMLNETQHRGNVTGCPGFNAVER 274          
BLAST of mRNA_C-linearis_contig112.1533.1 vs. uniprot
Match: A0A835YTR6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTR6_9STRA)

HSP 1 Score: 197 bits (500), Expect = 1.460e-59
Identity = 94/191 (49.21%), Postives = 119/191 (62.30%), Query Frame = 0
Query:   76 LYGL-CVPCAGATARHRLDGSSWCVNAMCLTPCAARNIVRHGYGIKGHCGADICCSLVCAPCVACQLLGETEKRGGIHGEWSESSARPRFEQP----WKFGLFNCMDDLRTCSYGFCCPMPAIGTVRTQMDDSDWIFNCLCFNPFIARSFVRQSYNIEGTDIADCALTCFCFPCSITQMLNETQHRGNITG 261
            +Y L C PCA ATA  R DGSSW  N   + PC ARN+VR GYGI+GHC +D+ C+ +  PC+  QLL ET +RG +   W+ S+   R+  P    WKFGL    +D     Y  C P  A+G+VRT +D SDWIFNC   N   AR+ VR +YNIEGT   D A +CFC PC+I+QM+ E QHRG + G
Sbjct:    1 MYSLFCPPCAVATAVTRFDGSSWANNCCFVNPCMARNVVREGYGIEGHCCSDLLCTCLFLPCMTGQLLAETAERGSVIDHWARSN---RYRSPTLTQWKFGLCGFTEDPGKLFYALCMPWCALGSVRTDLDGSDWIFNCCFLNSCAARAMVRHAYNIEGTTANDVATSCFCLPCAISQMMIEVQHRGRVNG 188          
BLAST of mRNA_C-linearis_contig112.1533.1 vs. uniprot
Match: A0A7S2V1M3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1M3_9STRA)

HSP 1 Score: 171 bits (432), Expect = 7.330e-49
Identity = 85/205 (41.46%), Postives = 111/205 (54.15%), Query Frame = 0
Query:   59 PSQKWHSSF--CCAGGIKSLYGLCVP-CAGATARHRLDGSSWCVNAMCLTPCAARNIVRHGYGIKGHCGADICCSLVCAPCVACQLLGETEKRGGIHGEWSESSARPRFEQPWKFGLFNCMDDLRTCSYGFCCPMPAIGTVRTQMDDSDWIFNCLCFNPFIARSFVRQSYNIEGTDIADCALTCFCFPCSITQMLNETQHRGNIT 260
            P + W S    CC+     ++  C+P CA A AR + DGS+ C N MC+   A RNI+R GY IKG C  D+  +L C  CV  Q++ E E RG +  ++   S RP  E PWK  +F+   +     YG CCP  AI   RT  D SD  FN LCF P +ARS +R+ YNIEG+ I D      C  C   Q++NE   RG +T
Sbjct:   15 PQEDWKSGLFGCCSSPKNLIFACCLPWCAVADARTKFDGSNCCFNVMCVGIVAGRNIIREGYKIKGGCIGDLIATLFCPVCVMTQMMNEVESRGKVTAQYG--SNRPATEVPWKHSIFDICFNSSNFIYGCCCPSCAIAQARTDFDGSDCCFNFLCFTPCLARSVIREGYNIEGSCIMDILCPWLCVECVACQLMNEVSDRGKVT 217          
BLAST of mRNA_C-linearis_contig112.1533.1 vs. uniprot
Match: A0A7S2XYH0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYH0_9STRA)

HSP 1 Score: 158 bits (399), Expect = 8.290e-44
Identity = 85/204 (41.67%), Postives = 113/204 (55.39%), Query Frame = 0
Query:   61 QKWHSSFC-CAGGI--KSLYGLCVPCAG-ATARHRLDGSSWCVNAMCLTPCAARNIVRHGYGIKGHCGADICCSLVCAPCVACQLLGETEKRGGIHGEWSESSARPRFEQPW-KFGLFNCMDDLRTCSYGFCCPMPAIGTVRTQMDDSDWIFNCLCFNPFIARSFVRQSYNIEGTDIADCALTCFCFPCSITQMLNETQHRGNI 259
            ++W +  C CAGG      YGL  PC   ATAR   DGS+WC N +     AAR+I+R GY IKG   +DI  ++ CA C A QL+ E E RG +  ++   +ARP   QPW K G+ +   +     +G CCP  AI   R+  D S++ FNC C +P +ARS +R+ YNIEG    D    C C  C+  QMLNE   RG +
Sbjct:   32 EQWQNGLCQCAGGSFGTCFYGLFCPCCAIATARTYYDGSNWCFNCLVTPHLAARDIIREGYNIKGSWLSDIFLTIFCAGCSAVQLMNEVETRGLVSADFG--TARPPDPQPWTKKGVCSNFGNF---FFGMCCPHCAISQARSSFDGSEFCFNCCCVSPCLARSVIREGYNIEGNCFGDLIYPCCCPSCAACQMLNEVDERGKV 230          
BLAST of mRNA_C-linearis_contig112.1533.1 vs. uniprot
Match: A0A7S4D5S2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D5S2_HETAK)

HSP 1 Score: 83.6 bits (205), Expect = 2.490e-16
Identity = 38/86 (44.19%), Postives = 50/86 (58.14%), Query Frame = 0
Query:  168 WKFGLFNCMDDLRTCSYGFCCPMPAIGTVRTQMDDSDWIFNCLCFNPFIARSFVRQSYNIEGTDIA-DCALTCFCFPCSITQMLNE 252
            W  GLF C++D +TC YG  CP  A  + R+++D S+W FN LC NP  AR  VR +Y I+GT    D      C PC+  Q+L E
Sbjct:   62 WDNGLFQCLEDPKTCVYGCFCPQCAHASARSKLDGSNWCFNLLCLNPCAARYIVRHTYKIKGTGCCGDVCRAAACGPCATCQLLAE 147          
BLAST of mRNA_C-linearis_contig112.1533.1 vs. uniprot
Match: A0A176W3Z0_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176W3Z0_MARPO)

HSP 1 Score: 60.5 bits (145), Expect = 1.050e-7
Identity = 31/103 (30.10%), Postives = 45/103 (43.69%), Query Frame = 0
Query:  168 WKFGLFNCMDDLRTCSYGFCCPMPAIGTVRTQMDDSDW-----------IFNCL---CFNPFIARSFVRQSYNIEGTDIADCALTCFCFPCSITQMLNETQHR 256
            W  G+  C+ D+R+C  G+CCP   +G +   +D               + +C    CF  F  R+ +R  Y +     AD    CFC  CSI Q+  E Q R
Sbjct:   11 WATGICGCLQDMRSCCCGWCCPCVLVGRIVEIIDQGATSNKAGCCTFCLLASCTGFACFYTFGYRAKLRAKYGLPAEPCADLCTDCFCLTCSICQVYRELQKR 113          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig112.1533.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LD13_ECTSI2.280e-14284.11Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YTR6_9STRA1.460e-5949.21Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2V1M3_9STRA7.330e-4941.46Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2XYH0_9STRA8.290e-4441.67Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S4D5S2_HETAK2.490e-1644.19Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A176W3Z0_MARPO1.050e-730.10Uncharacterized protein n=2 Tax=Marchantia polymor... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006461PLAC8 motif-containing proteinTIGRFAMTIGR01571TIGR01571coord: 167..254
e-value: 6.2E-14
score: 50.6
IPR006461PLAC8 motif-containing proteinPFAMPF04749PLAC8coord: 168..252
e-value: 9.2E-14
score: 52.2
IPR006461PLAC8 motif-containing proteinPANTHERPTHR15907FAMILY NOT NAMEDcoord: 158..260
IPR006461PLAC8 motif-containing proteinPANTHERPTHR15907FAMILY NOT NAMEDcoord: 38..148
NoneNo IPR availablePANTHERPTHR15907:SF21PROTEIN PLANT CADMIUM RESISTANCE 10coord: 38..148
NoneNo IPR availablePANTHERPTHR15907:SF21PROTEIN PLANT CADMIUM RESISTANCE 10coord: 158..260

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig112contigC-linearis_contig112:296805..313582 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig112.1533.1mRNA_C-linearis_contig112.1533.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig112 295353..313653 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig112.1533.1 ID=prot_C-linearis_contig112.1533.1|Name=mRNA_C-linearis_contig112.1533.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=271bp
MARKGKSGRSGASDTRSNASGRSRRSSRSRTSRASTGRPPAAMELVSGGG
AGGEGGNFPSQKWHSSFCCAGGIKSLYGLCVPCAGATARHRLDGSSWCVN
AMCLTPCAARNIVRHGYGIKGHCGADICCSLVCAPCVACQLLGETEKRGG
IHGEWSESSARPRFEQPWKFGLFNCMDDLRTCSYGFCCPMPAIGTVRTQM
DDSDWIFNCLCFNPFIARSFVRQSYNIEGTDIADCALTCFCFPCSITQML
NETQHRGNITGSPGFNSVER*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006461PLAC_motif_containing