prot_C-linearis_contig112.1531.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig112.1531.1
Unique Nameprot_C-linearis_contig112.1531.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length757
Homology
BLAST of mRNA_C-linearis_contig112.1531.1 vs. uniprot
Match: A0A6H5KW83_9PHAE (Arf-GAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW83_9PHAE)

HSP 1 Score: 316 bits (810), Expect = 5.360e-92
Identity = 191/297 (64.31%), Postives = 206/297 (69.36%), Query Frame = 0
Query:    3 SSAASKKAERLEKKLQAQLRACQKEPGNKRCADCTERLPQYITLDYNTFVCTACSGIHREFPHRVKSISLTTFTEEEVAGIKAGGNERNNQLYMARYRPGHDLPEPEGGRAEKHREFIRTKYVDKRWYGTPDDLERERQKEAXXXXXXXKRDAERASGR-----------RAGPAGRPRRGTVDRGLRKVEATPAAAAA---VKAPAGLPAKQVDLLDFLSDAPALXXXXXXXXXXXXX-----QPWDAFGGGNNNGTPGGSAPLVAAAGATAAPAPASGFAPWAAFGDAPAAPQQA 280
            SSAASKKA+RLE+KLQ QLRACQKEPGNKRCADCTERLPQYI  D+NTFVCTACSGIHREF HRVKSISL TF+EEEVA +KAGGNE +N+LYMARYRPGHDLPEPEGGRA KHREFIRTKYVDKRWYGTP+DL ++RQ+EA       KRDAER S             R+  A RPR+G  DRGLRKVE  PAA      VK P  +PAKQVDLLDFLSD PA                   QPWDAFG           AP    A A  A   A+GFA WAAFGD PA PQ A
Sbjct:    2 SSAASKKADRLERKLQVQLRACQKEPGNKRCADCTERLPQYIISDFNTFVCTACSGIHREFSHRVKSISLATFSEEEVAAVKAGGNEASNKLYMARYRPGHDLPEPEGGRAAKHREFIRTKYVDKRWYGTPEDLAQDRQREAEREESRAKRDAERGSSXXXXXXXXXXQPRSASAARPRKGGGDRGLRKVE--PAAXXXXXXVKVPP-VPAKQVDLLDFLSDDPAPPPAAPVQPAGAVAAPAQTQPWDAFG-----------APAPTPAAAAPAVGTAAGFASWAAFGDDPAVPQTA 284          
BLAST of mRNA_C-linearis_contig112.1531.1 vs. uniprot
Match: D8LD15_ECTSI (Arf-GAP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD15_ECTSI)

HSP 1 Score: 254 bits (650), Expect = 8.640e-76
Identity = 151/210 (71.90%), Postives = 165/210 (78.57%), Query Frame = 0
Query:    3 SSAASKKAERLEKKLQAQLRACQKEPGNKRCADCTERLPQYITLDYNTFVCTACSGIHREFPHRVKSISLTTFTEEEVAGIKAGGNERNNQLYMARYRPGHDLPEPEGGRAEKHREFIRTKYVDKRWYGTPDDLERERQKEAXXXXXXXKRDAERASGRRAGPAG-----------RPRRGTVDRGLRKVEATPAAAAAVKAPAGLPAKQ 201
            SSAASKKA+RLE+KLQ QLRACQKEPGNKRCADCTERLPQ+I  D+NTFVCTACSGIHREF HRVKSISL TF+EEEVA +KAGGNE +N+LYMARYRPGHDLPEPEGGRA KHREFIRTKYVDKRWYGTP+DL  +RQ+EAXXXXXXX                           RPR+ + DRGLRKVE    AAAAVKAP  +PAKQ
Sbjct:    2 SSAASKKADRLERKLQVQLRACQKEPGNKRCADCTERLPQWIISDFNTFVCTACSGIHREFSHRVKSISLATFSEEEVAAVKAGGNETSNKLYMARYRPGHDLPEPEGGRAAKHREFIRTKYVDKRWYGTPEDLANDRQREAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPRKASGDRGLRKVEP---AAAAVKAPP-VPAKQ 207          
BLAST of mRNA_C-linearis_contig112.1531.1 vs. uniprot
Match: A0A836C8Y8_9STRA (Putative GTPase activating protein for Arf-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8Y8_9STRA)

HSP 1 Score: 167 bits (423), Expect = 8.200e-45
Identity = 77/124 (62.10%), Postives = 94/124 (75.81%), Query Frame = 0
Query:   21 LRACQKEPGNKRCADCTERLPQYITLDYNTFVCTACSGIHREFPHRVKSISLTTFTEEEVAGIKAGGNERNNQLYMARYRPGHDLPEPEGGRAEKHREFIRTKYVDKRWYGTPDDLERERQKEA 144
            L+  QK   NKRCADCTERLP YI LD+ TFVCTACSGIHREF HR+KS+SL  FT++EV  I+ GGN  +N L++A+Y P  DLPEP+G   EK REFIR KY +KRWY T +DL RE +++A
Sbjct:   11 LKDAQKREENKRCADCTERLPNYIVLDFKTFVCTACSGIHREFSHRIKSVSLANFTDDEVRAIRKGGNRASNDLWLAKYDPDRDLPEPDGSSVEKRREFIRMKYQEKRWYATTEDLAREAEEQA 134          
BLAST of mRNA_C-linearis_contig112.1531.1 vs. uniprot
Match: A0A4D9DD40_9STRA (Arf-GAP domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DD40_9STRA)

HSP 1 Score: 142 bits (358), Expect = 3.640e-32
Identity = 68/119 (57.14%), Postives = 89/119 (74.79%), Query Frame = 0
Query:   12 RLEKKLQAQLRACQKEPGNKRCADCTERLPQYITLDYNTFVCTACSGIHREFPHRVKSISLTTFTEEEVAGIKAGGNERNNQLYMARYRPGHDLPEPEGGRAEKHREFIRTKYVDKRWY 130
            R E++L   ++   K PGNKRCADCTE+LPQY+ L +NTF+CTACSGIHREF HRVKSISL+TF+ EEV  +K GGNE    +Y+AR+ P  D  EP+ G   + R++IR KYV++RW+
Sbjct:    7 RKEERLLRAVKDLSKLPGNKRCADCTEKLPQYVNLTFNTFICTACSGIHREFSHRVKSISLSTFSLEEVKALKDGGNEACAAMYLARWEP-RDYAEPQAGDEHRIRDWIRHKYVERRWH 124          
BLAST of mRNA_C-linearis_contig112.1531.1 vs. uniprot
Match: A0A7S3YB30_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YB30_HETAK)

HSP 1 Score: 129 bits (324), Expect = 2.050e-31
Identity = 61/109 (55.96%), Postives = 78/109 (71.56%), Query Frame = 0
Query:   21 LRACQKEPGNKRCADCTERLPQYITLDYNTFVCTACSGIHREFPHRVKSISLTTFTEEEVAGIKAGGNERNNQLYMARYRPGHDLPEPEGGRAEKHREFIRTKYVDKRW 129
            +R  Q+  GNK CADC E+LPQY  L ++TFVCTACSGIHREF HRVKS+SL+ FT++E AG+K GGNE     Y+A++R G D   P  G     R++IR KY+DKR+
Sbjct:   14 VRKLQRLAGNKTCADCAEKLPQYANLTFHTFVCTACSGIHREFSHRVKSVSLSNFTDDEYAGLKKGGNEAAAAKYLAKHREGRDPAPPRPGDTAAVRDWIRAKYLDKRF 122          
BLAST of mRNA_C-linearis_contig112.1531.1 vs. uniprot
Match: A0A0M0K2F0_9EUKA (Arf gtpase activating protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K2F0_9EUKA)

HSP 1 Score: 127 bits (319), Expect = 2.460e-30
Identity = 58/119 (48.74%), Postives = 83/119 (69.75%), Query Frame = 0
Query:   12 RLEKKLQAQLRACQKEPGNKRCADCTERLPQYITLDYNTFVCTACSGIHREFPHRVKSISLTTFTEEEVAGIKAGGNERNNQLYMARYRPGHDLPEPEGGRAEKHREFIRTKYVDKRWY 130
            ++E+K Q  L+ CQK+P NK C DC  R  QY+ L++NTFVCTACSGIHRE  H++KS+ ++TFT +E+  + AGGN++  +++MA+Y    D   P  G  EK R F++ KY +KRWY
Sbjct:    6 KMEEKWQRILKECQKKPENKSCFDCMGRGNQYVVLNFNTFVCTACSGIHREMQHKIKSVGMSTFTTDEIKAVDAGGNDKAQKMWMAKY-DARDGAVPAEGETEKLRAFLKRKYQEKRWY 123          
BLAST of mRNA_C-linearis_contig112.1531.1 vs. uniprot
Match: A0A7S1APG6_NOCSC (Hypothetical protein (Fragment) n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1APG6_NOCSC)

HSP 1 Score: 122 bits (306), Expect = 2.560e-28
Identity = 60/117 (51.28%), Postives = 81/117 (69.23%), Query Frame = 0
Query:   14 EKKLQAQLRACQK-EPGNKRCADCTERLPQYITLDYNTFVCTACSGIHREFPHRVKSISLTTFTEEEVAGIKAGGNERNNQLYMARYRPGHDLPEPEGGRAEKHREFIRTKYVDKRW 129
            EK L  ++RA Q+ +  NKRCADCTE  P Y+ + + TFVCT CSG+HREF H+VK IS++ F+ EEV  ++ GGN +   ++MAR+ P  D PEP+     K REF+R KYVDK+W
Sbjct:    6 EKNLLDRIRAFQRGDKANKRCADCTELGPTYVCMTFGTFVCTTCSGLHREFSHKVKGISVSKFSVEEVEELERGGNAKAFDIWMARWEP-RDCPEPDNSEQGKVREFLRQKYVDKKW 121          
BLAST of mRNA_C-linearis_contig112.1531.1 vs. uniprot
Match: A0A0M0K1I0_9EUKA (Putative ADP-ribosylation factor gtpase-activating protein agd14-like protein n=2 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K1I0_9EUKA)

HSP 1 Score: 120 bits (301), Expect = 3.790e-28
Identity = 56/117 (47.86%), Postives = 81/117 (69.23%), Query Frame = 0
Query:   12 RLEKKLQAQLRACQKEPGNKRCADCTERLPQYITLDYNTFVCTACSGIHREFPHRVKSISLTTFTEEEVAGIKAGGNERNNQLYMARYRPGHDLPEPEGGRAEKHREFIRTKYVDKR 128
            ++E+K Q  L+ CQK+P NK C DC  R  QY+ L++NTFVCTACSGIHRE  H++KS+ ++TFT +E+  + AGGN++  +++MA+Y    D   P  G  EK R F++ KY +KR
Sbjct:    6 KMEEKWQRILKECQKKPENKSCFDCMGRGNQYVVLNFNTFVCTACSGIHREMQHKIKSVGMSTFTTDEIKAVDAGGNDKAQKMWMAKY-DARDGAVPAEGEVEKLRAFLKRKYQEKR 121          
BLAST of mRNA_C-linearis_contig112.1531.1 vs. uniprot
Match: A0A7S2KRS9_9DINO (Hypothetical protein (Fragment) n=2 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2KRS9_9DINO)

HSP 1 Score: 122 bits (307), Expect = 5.150e-28
Identity = 63/128 (49.22%), Postives = 85/128 (66.41%), Query Frame = 0
Query:   14 EKKLQAQLRACQK-EPGNKRCADCTERLPQYITLDYNTFVCTACSGIHREFPHRVKSISLTTFTEEEVAGIKAGGNERNNQLYMARYRPGHDLPEPEGGRAEKHREFIRTKYVDKRWYGTPDDLERER 140
            EK L  ++RA Q+ +  NKRCADCTE  P Y+ L Y TFVCT CSG+HREF H++K IS++ +T EEV  I+ GGN +  + ++AR+ P  D  EP+     + REFIR KY+D+RW    DD  R+R
Sbjct:    6 EKNLVDRIRAFQRSDKANKRCADCTEVGPTYVCLSYYTFVCTTCSGLHREFSHKIKGISISKWTPEEVDEIEQGGNAKAAEKFLARWDP-RDFAEPDSSDPNRCREFIRMKYIDRRWTNRGDDSGRDR 132          
BLAST of mRNA_C-linearis_contig112.1531.1 vs. uniprot
Match: A0A7J6MV98_PEROL (Arf-GAP domain-containing protein n=5 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6MV98_PEROL)

HSP 1 Score: 129 bits (325), Expect = 5.520e-28
Identity = 62/123 (50.41%), Postives = 86/123 (69.92%), Query Frame = 0
Query:   14 EKKLQAQLRACQK-EPGNKRCADCTERLPQYITLDYNTFVCTACSGIHREFPHRVKSISLTTFTEEEVAGIKAGGNERNNQLYMARYRPGHDLPEPEGGRAEKHREFIRTKYVDKRWYGTPDD 135
            +K L  +++A QK +  N+ CADC E  P YI  D+ TFVCT C+GIHRE  H+VK IS++ +TE+EV  ++A GN ++ ++YMA YRPG DL EP     ++ R+F++ KYVDKRW GTP D
Sbjct:   12 QKNLVDRIKAFQKSDKANRHCADCGELGPTYICTDFGTFVCTECAGIHRELNHKVKGISVSKWTEQEVENLEAHGNTKDREMYMANYRPGIDLAEPNNQDRQRLRDFMKLKYVDKRWAGTPPD 134          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig112.1531.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KW83_9PHAE5.360e-9264.31Arf-GAP domain-containing protein n=1 Tax=Ectocarp... [more]
D8LD15_ECTSI8.640e-7671.90Arf-GAP domain-containing protein n=1 Tax=Ectocarp... [more]
A0A836C8Y8_9STRA8.200e-4562.10Putative GTPase activating protein for Arf-domain-... [more]
A0A4D9DD40_9STRA3.640e-3257.14Arf-GAP domain-containing protein n=1 Tax=Nannochl... [more]
A0A7S3YB30_HETAK2.050e-3155.96Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A0M0K2F0_9EUKA2.460e-3048.74Arf gtpase activating protein n=1 Tax=Chrysochromu... [more]
A0A7S1APG6_NOCSC2.560e-2851.28Hypothetical protein (Fragment) n=1 Tax=Noctiluca ... [more]
A0A0M0K1I0_9EUKA3.790e-2847.86Putative ADP-ribosylation factor gtpase-activating... [more]
A0A7S2KRS9_9DINO5.150e-2849.22Hypothetical protein (Fragment) n=2 Tax=Brandtodin... [more]
A0A7J6MV98_PEROL5.520e-2850.41Arf-GAP domain-containing protein n=5 Tax=Perkinsu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 3..27
NoneNo IPR availableCOILSCoilCoilcoord: 139..161
NoneNo IPR availablePANTHERPTHR46085FAMILY NOT NAMEDcoord: 12..162
IPR001164Arf GTPase activating proteinPRINTSPR00405REVINTRACTNGcoord: 49..66
score: 38.12
coord: 30..49
score: 29.83
coord: 67..88
score: 34.01
IPR001164Arf GTPase activating proteinSMARTSM00105arf_gap_3coord: 18..140
e-value: 1.0E-20
score: 84.8
IPR001164Arf GTPase activating proteinPFAMPF01412ArfGapcoord: 20..130
e-value: 9.4E-28
score: 96.6
IPR001164Arf GTPase activating proteinPROSITEPS50115ARFGAPcoord: 15..143
score: 18.808
IPR038508ArfGAP domain superfamilyGENE3D3.30.40.160coord: 4..136
e-value: 6.8E-31
score: 108.8
IPR037278ARFGAP/RecO-like zinc fingerSUPERFAMILY57863ArfGap/RecO-like zinc fingercoord: 18..130

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig112contigC-linearis_contig112:286122..291000 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig112.1531.1mRNA_C-linearis_contig112.1531.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig112 281896..291241 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig112.1531.1 ID=prot_C-linearis_contig112.1531.1|Name=mRNA_C-linearis_contig112.1531.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=757bp
MSSSAASKKAERLEKKLQAQLRACQKEPGNKRCADCTERLPQYITLDYNT
FVCTACSGIHREFPHRVKSISLTTFTEEEVAGIKAGGNERNNQLYMARYR
PGHDLPEPEGGRAEKHREFIRTKYVDKRWYGTPDDLERERQKEAEREEAK
AKRDAERASGRRAGPAGRPRRGTVDRGLRKVEATPAAAAAVKAPAGLPAK
QVDLLDFLSDAPALAPAPAAPPVAPPAQPWDAFGGGNNNGTPGGSAPLVA
AAGATAAPAPASGFAPWAAFGDAPAAPQQATRPPPPPPPQQAAASTGSGP
SFSASSSPFGSGFPPPPPPGGAVAAAPAGVDAGAQQPQQQSWGGAGATNF
SQPAGFQGQQPPQQSQQQQQQQPQGTPSPGFGAQSMGVTTPPAMPSPAGA
ALGAGVAPARPPSGWPQQQQQQQQQQQSAGGFFPAPQGVQGGAAPPAAAA
RAGGGFADGSGAGGGFVASFEALSVSSPAARAAAAGTVQPTQVFPGTQRA
HQRTNSQPQQQQGGGALFAQAAQPQPQPSPQPSPQQQQQQQQQQQQQRGV
FGGGQQPQQSPQQQQQQQQQQPQQGFAAFGQQAPQQQQQPQQQQFHPQQQ
QQQFGHANFPQTAQRQQYPQQQYPHPQQHQQHFQQQYHPQQQQQQQQCKP
RGCPQRPKVHNSRSMRNTFHSSRCSSKCSRCRCSRGTQGWRDRPPRHSQL
RRRRLMWTPSQSWRREEQAAPTGEGQEERSASKRGTKSFTSEEVTLLWTA
SCRRCT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001164ArfGAP_dom
IPR038508ArfGAP_dom_sf
IPR037278ARFGAP/RecO