prot_C-linearis_contig111.1503.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig111.1503.1
Unique Nameprot_C-linearis_contig111.1503.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length383
Homology
BLAST of mRNA_C-linearis_contig111.1503.1 vs. uniprot
Match: D7FLJ6_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLJ6_ECTSI)

HSP 1 Score: 521 bits (1341), Expect = 8.730e-183
Identity = 273/382 (71.47%), Postives = 315/382 (82.46%), Query Frame = 0
Query:    6 SLALVAALLAAPAAAVEYTVSTCADLADVDDALATGLTIDSSTFSCDEYTRFRVRNTMTLKATVPAVEFSNFSLKVLGELAVEPDVTFTGVAEQVKNGGVLYVAEGATATFMGASEFSNNSIAIKQIGPISCGEGCTRIGRGVSYITKKGGAIHNKGMLTFDGDATFAGNYVETEDSVESGKAGALSNSGSGSILFRGKLTVKDSDADGVFGGLGGGLFNRGDIVVDGESYFEANGASDGGAIYQTKIGTMTFNAMATFLNNEATELQGGAIYNEG-VMDFNAGSLFESNGANGSGDGGRGGAIYNANGGVITLAGSTTFKENAAFWGGAIYNNERDE----PLPTTTYPDDAIFLDNEAEFCPEINNGFVGFDNDEPCPPV 382
            SL L+A+LLAAPAAAVEYTV+TCADLADVDD   T LTID+STF+CDEYTRFRVRN MTLKATVPAVEF NFSLKVLGEL VEPDV F GV +QVKNGGVL VAEGATATFMG SEFS+NS+A+KQIGP+SCG+GCTRIGRG+SYI KKGGAIHNKG LTF+GDATF  N V TEDSVE GKAGA+SN+GSG+ILF+ KLT+KD++ADG F G+GG ++NRG+IVV+GES F  N +SDGG IYQT IGTMTFN  ATF  N A +L GG + N+G V++ NAGSLFE NGA+GSGDGG GGAIYN N GV+TL GSTTF+ENAAF GGAIY ++ DE    P   TT+PDD +F DN AE CP+++NG    D+D  CP V
Sbjct:    5 SLTLIASLLAAPAAAVEYTVATCADLADVDDTQVTSLTIDASTFACDEYTRFRVRNAMTLKATVPAVEFGNFSLKVLGELTVEPDVMFNGVVDQVKNGGVLSVAEGATATFMGTSEFSDNSVAVKQIGPVSCGDGCTRIGRGLSYIVKKGGAIHNKGTLTFEGDATFERNEVHTEDSVEQGKAGAISNTGSGTILFKSKLTMKDNEADGFFEGIGGAIYNRGEIVVEGESLFSLNTSSDGGGIYQTSIGTMTFNGAATFSENSAYDLLGGGLMNDGGVVNINAGSLFELNGASGSGDGGLGGAIYNTNAGVVTLMGSTTFRENAAFMGGAIYTSDGDEENGEPASVTTFPDDTVFEDNSAEHCPDVHNG----DSDN-CPVV 381          
BLAST of mRNA_C-linearis_contig111.1503.1 vs. uniprot
Match: D8LJ44_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ44_ECTSI)

HSP 1 Score: 502 bits (1293), Expect = 1.730e-175
Identity = 267/387 (68.99%), Postives = 312/387 (80.62%), Query Frame = 0
Query:    1 MKPASSLALVAALLAAPAAAVEYTVSTCADLADVDDALATGLTIDSSTFSCDEYTRFRVRNTMTLKATVPAVEFSNFSLKVLGELAVEPDVTFTGVAEQVKNGGVLYVAEGATATFMGASEFSNNSIAIKQIGPISCGEGCTRIGRGVSYITKKGGAIHNKGMLTFDGDATFAGNYVETEDSVESGKAGALSNSGSGSILFRGKLTVKDSDADGVFGGLGGGLFNRGDIVVDGESYFEANGASDGGAIYQTKIGTMTFNAMATFLNNEATELQGGAIYNEG-VMDFNAGSLFESNGANGSGDGGRGGAIYNANGGVITLAGSTTFKENAAFWGGAIYNNE----RDEPLPTTTYPDDAIFLDNEAEFCPEINNGFVGFDNDEPCPPV 382
            MKP  SL L+A LLAAPAAAVEYTV+TCADLADVDD   TGLTID+STF+CDEYTRF VRN+MTLKATV AVEF NFSLKVLGEL VEPDVTF GV +QVKNGGVL VAEGAT+TFMG SEFS+NS+A+KQ+G +SCG+GC R GRG+SY+ KKGGAIHNKG LTF+GDATF  N V TEDSVE GKAGA+SN+GSG+I F+ KLT+KD++A+G F GLGG ++NRG+I+VDGES F  N ASDGG IYQT IG MTFN+MATF  N A EL+GG + N G V++ NAGSLFE NGA+GSGDGG GGAIYN N G +TL GSTTF+ENAA+ GGAIY ++      E    TT+PDD +F DN A+FCP++ +G    DND  CP V
Sbjct:    1 MKP-CSLTLIAGLLAAPAAAVEYTVATCADLADVDDTQVTGLTIDTSTFACDEYTRFPVRNSMTLKATVAAVEFGNFSLKVLGELTVEPDVTFNGVVDQVKNGGVLSVAEGATSTFMGTSEFSDNSVAVKQLGAVSCGDGCERTGRGLSYVVKKGGAIHNKGTLTFEGDATFERNAVHTEDSVEQGKAGAISNTGSGTIWFKSKLTMKDNEAEGFFEGLGGAIYNRGEIIVDGESLFSLNTASDGGGIYQTPIGKMTFNSMATFSENSAYELRGGGLMNYGGVVNINAGSLFELNGASGSGDGGLGGAIYNGNEGAVTLMGSTTFRENAAYEGGAIYTDDGSVANGEAASVTTFPDDTVFEDNRADFCPDVFDG----DNDN-CPVV 381          
BLAST of mRNA_C-linearis_contig111.1503.1 vs. uniprot
Match: D7FL58_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL58_ECTSI)

HSP 1 Score: 278 bits (711), Expect = 5.120e-89
Identity = 148/267 (55.43%), Postives = 180/267 (67.42%), Query Frame = 0
Query:  117 MGASEFSNNSIAIKQIGPISCGEGCTRIGRGVSYITKKGGAIHNKGMLTFDGDATFAGNYVETEDSVESGKAGALSNSGSGSILFRGKLTVKDSDADGVFGGLGGGLFNRGDIVVDGESYFEANGASDGGAIYQTKIGTMTFNAMATFLNNEATELQGGAIYNEG-VMDFNAGSLFESNGANGSGDGGRGGAIYNANGGVITLAGSTTFKENAAFWGGAIYNNERDEPLPTTTYPDDAIFLDNEAEFCPEINNGFVGFDNDEPCPPV 382
            MG SEFSNNS+A+KQ G ISCG+GCTR  RG++YI KKGGAIHNKG LTFDGDATF  N   TE S + G  GA+SN+GSG+ILF+ KLT+KD+ AD  F GLGG ++NRG+I+V+G S F  N A+ GG I+QT IGTMTFN MATF  N A E  GG + N G V++ NAGSLFE N A+ SGDGG GGAI+N                    WGGAIY N+ D P   TT+PDD       AE+CP+++NG     +D+ CP V
Sbjct:    1 MGTSEFSNNSVAVKQFGRISCGDGCTRSERGLTYIVKKGGAIHNKGTLTFDGDATFERNVAHTESSNQRGNGGAISNTGSGTILFKSKLTMKDNQADANFAGLGGAIYNRGEIIVEGASLFSLNHAAAGGGIHQTSIGTMTFNGMATFSENFAGEPTGGGLTNNGGVVNINAGSLFEHNWASASGDGGFGGAIFNTKXXXXXXXXXXXXXXXXXHWGGAIYTNDADGPGSVTTFPDDXXXXXXRAEYCPDVHNG-----DDDNCPVV 262          
BLAST of mRNA_C-linearis_contig111.1503.1 vs. uniprot
Match: A0A6H5KTD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTD4_9PHAE)

HSP 1 Score: 259 bits (662), Expect = 4.770e-80
Identity = 166/367 (45.23%), Postives = 212/367 (57.77%), Query Frame = 0
Query:   25 VSTCADLADVDDALATGLTIDSSTFSCDEYTRFRVRNTMTLKATVPAVEFSNFSLKVLGELAVEPDVTFTGVAEQVKNGGVLYVAEGATATFMGASEFSNNSIAIKQIGPISCGEGCTRIGRGVSYITKKGGAIHNKGMLTFDGDATFAGNYVETEDSVESGKAGALSNSGSGSILFRGKLTVKDSDADGVFGGL-GGGLFNRGDIVVDGESYFEANGASDGGAIYQTKIGTMTFNAMATFLNNEATELQGGAIYN-EGVMDFNAGSLFESNGANGSGDGGRGGAIYNANGGVITLAGSTTFKENAAFWGGAIYNNE--------RDEP--LPTTTYPDDAIFLDNEAEFCPEINNGFVGFDNDEPC 379
            V +C + A +D  + T +TI  + F+CDEYTR  +R+ M LK++V  V FSNF+LKV G L VEPDV FTGV+   KNGGVL +  GA   F G +EFS+NSI    I   +  E           I +KGGAIH KG LTF+ DATF+GN +       SG  GA+S    GSI F GKLT+ D++AD  FGG  GG +FNRGDIVVDGE+ F  N    GGAI+Q K  T+ FN   TF +N+  +  GG I N  G +  NAGSLF    A  SGDGG              L GSTTF++N   WGGA++N+          DE   +PT +YP+D IF DN+A++C    N F    ++E C
Sbjct:   26 VGSCTEFAAIDRKVETEVTITEADFACDEYTRLSIRSNMVLKSSVGKVTFSNFALKVYGSLTVEPDVVFTGVSLVEKNGGVLKLELGAVGVFKGTAEFSDNSIISTSIDESTEEE-----------ILRKGGAIHTKGSLTFEKDATFSGN-LNDRLYYGSGPGGAISVHVKGSIYFMGKLTMTDNEADDYFGGAQGGAIFNRGDIVVDGEAEFTGNIGGRGGAIFQEKWATLVFNDFVTFTSNKCLDTFGGTIANIGGDVTANAGSLFFDGFAENSGDGGLXXXXXXXXXXXXXLTGSTTFRQNYGNWGGAVFNSAVPNAYFTAEDESYVMPTISYPEDTIFEDNDAQYC----NDFASDFDEETC 376          
BLAST of mRNA_C-linearis_contig111.1503.1 vs. uniprot
Match: D7FQG1_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQG1_ECTSI)

HSP 1 Score: 192 bits (487), Expect = 1.370e-56
Identity = 99/178 (55.62%), Postives = 130/178 (73.03%), Query Frame = 0
Query:  207 VKDSDADGVFGGLGGGLFNRGDIVVDGESYFEANGASDGGAIYQTKIGTMTFNAMATFLNNEATELQGGAIYNEG-VMDFNAGSLFESNGANGSGDGGRGGAIYNANGGVITLAGSTTFKENAAFWGGAIYNNERDEPLPTTTYPDDAIFLDNEAE-FCPEINNGFVGFDNDEPCPPV 382
            + ++D DG +GGLGG ++NRG+I V+GES F  N +SDGG IYQT IG MTFN+MATF +N A  L+GG + N+G V++ NAGSLFE N A  + DGGRGGAI+N NGGV+TL G TTF+EN A+WGGAIY ++   P   TT+PDD +F DN A+ +CP+++NG     +D  CP V
Sbjct:    1 MNENDTDGQYGGLGGAIYNRGEITVEGESLFSENRSSDGGGIYQTSIGIMTFNSMATFFHNVAENLRGGGLMNDGGVVNINAGSLFEQNFAAANADGGRGGAIHNRNGGVVTLMGPTTFRENGAWWGGAIYTDDG-YPASVTTFPDDTVFEDNSADAYCPDVHNG-----DDNNCPVV 172          
BLAST of mRNA_C-linearis_contig111.1503.1 vs. uniprot
Match: D7FQG2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQG2_ECTSI)

HSP 1 Score: 144 bits (363), Expect = 5.700e-39
Identity = 78/103 (75.73%), Postives = 86/103 (83.50%), Query Frame = 0
Query:    1 MKPASSLALVAALLAAPAAAVEYTVSTCADLADVDDALATGLTIDSSTFSCDEYTRFRVRNTMTLKATVPAVEFSNFSLKVLGELAVEPDVTFTGVAEQVKNG 103
            MKP S L  +A+LLA PAAAVEY V+TCADLADVDD   TGLTID++TF+CDEYTRFRVRN+MTLKATV AVEF NFSLKVLGEL VEPDVTF GV +Q   G
Sbjct:    1 MKPVS-LTFIASLLATPAAAVEYMVTTCADLADVDDTQVTGLTIDANTFACDEYTRFRVRNSMTLKATVSAVEFGNFSLKVLGELTVEPDVTFNGVVDQSSEG 102          
BLAST of mRNA_C-linearis_contig111.1503.1 vs. uniprot
Match: A0A221T124_9DEIO (Uncharacterized protein n=2 Tax=Deinococcus ficus TaxID=317577 RepID=A0A221T124_9DEIO)

HSP 1 Score: 60.5 bits (145), Expect = 2.860e-6
Identity = 60/223 (26.91%), Postives = 93/223 (41.70%), Query Frame = 0
Query:  145 GRGVSYITKKGGAIHNKG--MLTFDGDATFAGNYVETEDSVESGKAGALSNSGSGSILFRGKLTVKD------SDADGV-------FGGLGGGLFNRGDIVVDGESYFEANGASDGGAIYQTKIGTMTFNAMATFLNNEATELQGGAIYNEGVMDFNAGSLFESNGANGSGDGGRGGAIYNANGGVITLAGSTTFKENAAFWGGAIYNNER--DEPLPTTTYP 350
            G+G       G  +H +   + T+ G    AG+   T  +V  G A    N G  ++L  GKLT+ D      + A G+       + G GGG+FN G +++DG  + +AN A   G   Q+ + T+      +  +NEATE                      +G  G+  G  GG IY    G + + G T     A+++GG + +     D    TT YP
Sbjct:  108 GQGRLITLGTGAGVHEQATSLATYGGVILTAGSLTLTGTTVTGGTA---DNGGGIAVLSTGKLTLLDDALVTANTAPGITVTQPGEYTGTGGGVFNMGQLIIDG-GHVDANEARQSGGGIQSTLNTVVTLKSGSVSSNEATE--------------------PLSGVTGNATGSAGGGIYTT--GALDVQGGTISNNTASYFGGGVVSQAHCADTACATTIYP 304          
BLAST of mRNA_C-linearis_contig111.1503.1 vs. uniprot
Match: A0A328S4R3_9EURY (Big_3_5 domain-containing protein n=1 Tax=Methanosphaera sp. rholeuAM74 TaxID=1945579 RepID=A0A328S4R3_9EURY)

HSP 1 Score: 59.3 bits (142), Expect = 7.620e-6
Identity = 63/189 (33.33%), Postives = 90/189 (47.62%), Query Frame = 0
Query:  179 TEDSVESGKAGALSNSG----SGSILFRGKLTVKDSDADGVFGGLGGGLFNRGDIVVDGESYFEANGASDGGAIYQTKIGTMTFNAMATFLNNEATELQGGAIYNEGVMDFNAGSLFESNGANGSGDGGRGGAIYNANGGVITLAGSTTFKENA-AFWGGAIYNNERDEPLPTTTYPDDAIFLDNEAEF 362
            T D+ ES  + A++N G    +GSI    K   + ++        GG +FN G +VVD  S F+ N AS G  IY       T N   + LNN  T   GG+IY        A + F  N A        GGAIYNA G ++ ++    +K  A +F+GGAIYN         TT  +++I+  N+A +
Sbjct:  153 TLDTYESNDSAAINNDGKLIINGSIFKNVKRESRTAN--------GGVIFNTGTLVVD-NSTFDTNEASYGAGIYGRNS---TINVTNSVLNNHYTTNVGGSIYAMRSNITIANTTFTENRAV------SGGAIYNAFG-LMNVSDCVFYKNEAHSFYGGAIYNTG-------TTTTENSIYYANDAHY 315          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig111.1503.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7FLJ6_ECTSI8.730e-18371.47Asn/thr-rich large protein family protein n=1 Tax=... [more]
D8LJ44_ECTSI1.730e-17568.99Asn/thr-rich large protein family protein n=1 Tax=... [more]
D7FL58_ECTSI5.120e-8955.43Asn/thr-rich large protein family protein n=1 Tax=... [more]
A0A6H5KTD4_9PHAE4.770e-8045.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQG1_ECTSI1.370e-5655.62Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
D7FQG2_ECTSI5.700e-3975.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A221T124_9DEIO2.860e-626.91Uncharacterized protein n=2 Tax=Deinococcus ficus ... [more]
A0A328S4R3_9EURY7.620e-633.33Big_3_5 domain-containing protein n=1 Tax=Methanos... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003368Polymorphic outer membrane protein repeatTIGRFAMTIGR01376TIGR01376coord: 262..278
e-value: 0.0015
score: 16.3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..382
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.855

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig111contigC-linearis_contig111:371891..383084 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig111.1503.1mRNA_C-linearis_contig111.1503.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig111 371821..384320 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig111.1503.1 ID=prot_C-linearis_contig111.1503.1|Name=mRNA_C-linearis_contig111.1503.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=383bp
MKPASSLALVAALLAAPAAAVEYTVSTCADLADVDDALATGLTIDSSTFS
CDEYTRFRVRNTMTLKATVPAVEFSNFSLKVLGELAVEPDVTFTGVAEQV
KNGGVLYVAEGATATFMGASEFSNNSIAIKQIGPISCGEGCTRIGRGVSY
ITKKGGAIHNKGMLTFDGDATFAGNYVETEDSVESGKAGALSNSGSGSIL
FRGKLTVKDSDADGVFGGLGGGLFNRGDIVVDGESYFEANGASDGGAIYQ
TKIGTMTFNAMATFLNNEATELQGGAIYNEGVMDFNAGSLFESNGANGSG
DGGRGGAIYNANGGVITLAGSTTFKENAAFWGGAIYNNERDEPLPTTTYP
DDAIFLDNEAEFCPEINNGFVGFDNDEPCPPV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003368POMP_repeat