prot_C-linearis_contig111.1502.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig111.1502.1
Unique Nameprot_C-linearis_contig111.1502.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length189
Homology
BLAST of mRNA_C-linearis_contig111.1502.1 vs. uniprot
Match: D7G3Q9_ECTSI (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Q9_ECTSI)

HSP 1 Score: 65.5 bits (158), Expect = 4.430e-9
Identity = 37/100 (37.00%), Postives = 56/100 (56.00%), Query Frame = 0
Query:   36 LGKFADKDGYNGKPPGEATLQAAWK-------VVSAE-----REPWLQRRAQMVGGKILAGDASFKFTKKVKVDG------NRVYQGTYTIMNEHHLVAK 117
             G F DK+G+NG  P +  L+A W        V+ A+     RE +LQR  Q+V G +LAGDASFK+ K +++        ++  QG +TI+NE+   A+
Sbjct:   45 FGGFGDKEGFNGAWPSDQYLRAVWHKWFYDTVVIEADGVRMTREDYLQRVGQLVDGMVLAGDASFKYAKVIRLTSAGESTKSKPIQGIFTILNEYEQAAE 144          
BLAST of mRNA_C-linearis_contig111.1502.1 vs. uniprot
Match: D7FIV2_ECTSI (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIV2_ECTSI)

HSP 1 Score: 61.2 bits (147), Expect = 1.290e-7
Identity = 45/131 (34.35%), Postives = 60/131 (45.80%), Query Frame = 0
Query:   36 LGKFADKDGYNGKPPGEATLQAAWK-------VVSAE-----REPWLQRRAQMVGGKILAGDASFKFTKKVKV----DGNRV--YQGTYTIMNEHHLVAKQTMLTQFGVSSMPEMRKPLEELARRINLHGF 148
                 D  G++  PP    L   W        VV A+     RE +LQRRAQ+V G  LAGDASFK+ K +++    DG R     G +TIMNE+  V     +T   V  +    K +    +R   HGF
Sbjct:  205 FSSIGDPSGFHSSPPSAHYLGDIWHKGFYETPVVQADGCSWTREEYLQRRAQLVDGCSLAGDASFKYAKVIRLSAGADGTRARPVHGIFTIMNEYDQVVFSKAMTTASVHDLKNDLKMM--FVKRFLGHGF 333          
BLAST of mRNA_C-linearis_contig111.1502.1 vs. uniprot
Match: A0A6H5KFP9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFP9_9PHAE)

HSP 1 Score: 53.5 bits (127), Expect = 2.020e-5
Identity = 33/101 (32.67%), Postives = 47/101 (46.53%), Query Frame = 0
Query:   33 PEYLGKFADKDGYNGKPPGEATLQAAWKVVSAE------------REPWLQRRAQMVGGKILAGDASFKFTKKVKV------DGNRVYQGTYTIMNEHHLV 115
            PE  G F D + Y G  P +  L+  W+   +E            RE +L R  Q   G +LAGDASFKF K +++      +  R   G +T+ NE+  V
Sbjct:  102 PEKFGSFDDTEKYCGAVPSDHYLRDVWRTYFSELPVLEVEGVKWTREDYLPRVHQRCDGTVLAGDASFKFAKIIRLGATAHGERTRPVHGIFTVFNEYEQV 202          
BLAST of mRNA_C-linearis_contig111.1502.1 vs. uniprot
Match: A0A6H5JCK3_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK3_9PHAE)

HSP 1 Score: 53.5 bits (127), Expect = 4.170e-5
Identity = 47/133 (35.34%), Postives = 68/133 (51.13%), Query Frame = 0
Query:   26 LQARVDHPEYLGKFADKDGYNGKPPGEATLQAAWKVVSA-EREPWLQRRAQMVGGKILAGDASFKFTKKVKV----DGNR---VYQGTYTIMNEH-HLVAKQTMLTQFGVSSMPEMRKPLEEL-ARRINLHGF 148
            L  R     YLG    K  Y      E  +   W    A     +LQRRAQ+V G++LAGDASFK+ K +++    DG R   VY G +TIMNE+  +V  + M T    +S+ +++  L+ +  +R   HGF
Sbjct:    7 LNRRHPSAHYLGDIWHKWFY------EMPMVKTWVTTDALGHVNYLQRRAQLVDGRLLAGDASFKYAKVIRLPTGPDGTRARPVY-GIFTIMNEYDQVVFSKAMKT----ASVHDLKSDLKMMFVQRFVGHGF 128          
BLAST of mRNA_C-linearis_contig111.1502.1 vs. uniprot
Match: A0A6H5JXW9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXW9_9PHAE)

HSP 1 Score: 52.4 bits (124), Expect = 4.480e-5
Identity = 33/101 (32.67%), Postives = 47/101 (46.53%), Query Frame = 0
Query:   33 PEYLGKFADKDGYNGKPPGEATLQAAWKVVSAE------------REPWLQRRAQMVGGKILAGDASFKFTKKVKV------DGNRVYQGTYTIMNEHHLV 115
            PE  G F D + Y G  P +  L+  W+   +E            RE +L R  Q   G +LAGDASFKF K +++      +  R   G +T+ NE+  V
Sbjct:   88 PEKFGSFDDTEKYCGAVPSDHYLRDVWRTYFSELPVLGVEGVKWTREDYLPRVHQRWDGTVLAGDASFKFAKIIRLGATAHGERTRPVHGIFTVFNEYKQV 188          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig111.1502.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G3Q9_ECTSI4.430e-937.003'-5' exonuclease domain-containing protein n=1 Ta... [more]
D7FIV2_ECTSI1.290e-734.353'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5KFP9_9PHAE2.020e-532.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCK3_9PHAE4.170e-535.343'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5JXW9_9PHAE4.480e-532.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig111contigC-linearis_contig111:368322..369130 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig111.1502.1mRNA_C-linearis_contig111.1502.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig111 368322..369130 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig111.1502.1 ID=prot_C-linearis_contig111.1502.1|Name=mRNA_C-linearis_contig111.1502.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=189bp
MPTLCRFYFQVSYLRKSVQPFLDPTLQARVDHPEYLGKFADKDGYNGKPP
GEATLQAAWKVVSAEREPWLQRRAQMVGGKILAGDASFKFTKKVKVDGNR
VYQGTYTIMNEHHLVAKQTMLTQFGVSSMPEMRKPLEELARRINLHGFDP
IQVGGVTTDSEHCRLSSVKPSRHSVLALFRNVFGTIPSH
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