prot_C-linearis_contig110.1454.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig110.1454.1
Unique Nameprot_C-linearis_contig110.1454.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length234
Homology
BLAST of mRNA_C-linearis_contig110.1454.1 vs. uniprot
Match: D7FIV2_ECTSI (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIV2_ECTSI)

HSP 1 Score: 360 bits (925), Expect = 2.240e-115
Identity = 182/243 (74.90%), Postives = 204/243 (83.95%), Query Frame = 0
Query:    1 VLDRLADDLLEGKGFSAASKSLTKAYNAKYFSHVRSYVSLAKRRIAKQRGIYGQHADLGVIPK------SFGFPQQPPSAHYLRDVWHKWFYEIPVVQVYGCSWTREEYLQMRAQLIDGRLLAGDASFKYAKVIRLSTGADGTRARPVYGIFTIMNEYDQVVFSKAMATASVHDLKNDLKMMFVKRFLGHGFKLPVMFYTDECCEDRQLLLTMFKEIESETGARLYVADEK---GAPGVEVLP 234
            V+DRLADDLLEG GF+AASKSL   Y+A+YF+ +RSYVSLA R +++ +G++  + DLG+IPK        GF   PPSAHYL D+WHK FYE PVVQ  GCSWTREEYLQ RAQL+DG  LAGDASFKYAKVIRLS GADGTRARPV+GIFTIMNEYDQVVFSKAM TASVHDLKNDLKMMFVKRFLGHGFKLPV+FY+DECC+DRQLLLTMFKEIE ETGARLY   E+   G+PGVEVLP
Sbjct:  143 VVDRLADDLLEGTGFAAASKSLANTYHARYFNQLRSYVSLANRCVSRHKGMW-PNVDLGMIPKFSSIGDPSGFHSSPPSAHYLGDIWHKGFYETPVVQADGCSWTREEYLQRRAQLVDGCSLAGDASFKYAKVIRLSAGADGTRARPVHGIFTIMNEYDQVVFSKAMTTASVHDLKNDLKMMFVKRFLGHGFKLPVIFYSDECCDDRQLLLTMFKEIELETGARLYDTAEEAGGGSPGVEVLP 384          
BLAST of mRNA_C-linearis_contig110.1454.1 vs. uniprot
Match: A0A6H5K4D4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4D4_9PHAE)

HSP 1 Score: 239 bits (610), Expect = 1.690e-70
Identity = 131/222 (59.01%), Postives = 155/222 (69.82%), Query Frame = 0
Query:   19 SKSLTKAYNAKYFSHVRSYVSLAKRRIAKQRGIYGQHADLGVIPK------SFGFPQQPPSAHYLRDVWHKWFYEIPVVQVYGCSWTREEYLQMRAQLIDGRLLAGDASFKYAKVIRLSTGADGTRARPVYGIFTIMNEYDQVVFSKAMATASVHDLKNDLKMMFVKRFLGHGFKLPVMFYTDECCEDRQLLLTMFKEIESETGARLYVADEKGAPGVEVLP 234
            SKSL +AYN++YFS +RSYVSLAK+ I+K RG+YGQ ++  V PK        G+    PSAH+L D+W+KWFYE PVVQ+                             KYAKVIRL+TG DGTRA PVYGIFTIMNEYDQVVFSKAM+TASV+DLKND KM+FVK  +GHGF LPV+FY+D CCEDRQLLL MFKEIESE   RLY A  +GA  +E+LP
Sbjct:  297 SKSLAQAYNSRYFSQMRSYVSLAKKGISKYRGLYGQQSNPDV-PKFAGTGDPSGYNSSSPSAHHLADIWNKWFYETPVVQLVMLP------------------------SKYAKVIRLATGEDGTRALPVYGIFTIMNEYDQVVFSKAMSTASVYDLKNDPKMLFVKCVVGHGFTLPVIFYSDGCCEDRQLLLWMFKEIESENHVRLYDAAAEGA--IELLP 491          
BLAST of mRNA_C-linearis_contig110.1454.1 vs. uniprot
Match: D7FVB4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVB4_ECTSI)

HSP 1 Score: 207 bits (528), Expect = 6.710e-64
Identity = 113/243 (46.50%), Postives = 158/243 (65.02%), Query Frame = 0
Query:    1 VLDRLADDLLEGKGFSAASKSLTKAYNAKYFSHVRSYVSLAKRRIAKQRGIYGQHADLGVIPKSFG-------FPQQPPSAHYLRDVWHKWFYEIPVVQVYGCSWTREEYLQMRAQLIDGRLLAGDASFKYAKVIRLSTGADGTRARPVYGIFTIMNEYDQVVFSKAMATASVHDLKNDLKMMFVKRFLGHGFKLPVMFYTDECCEDRQLLLTMFKEIESETGARLYVADEKGAPGV--EVLP 234
            ++DRLADDL+ GKGFSAA+K++ +A+  K+      Y SL   R     GI+ + A+L   P+ FG       +    PS HYLRDVW  +F ++PV++V G SWT EEY     Q  DG +L GDASFK+AK+IRL   A   R+RPVYG+FT+ NEY+QVV+ + M T ++ +L  +LK+ F+ RF+ +GFK+P ++ TD+CC+DRQLL  +F+E E  T   LY+ DE  A GV  E+LP
Sbjct:    1 MVDRLADDLVHGKGFSAAAKNICQAHTTKFMVDQLKYTSLVNSRRTSS-GIF-RSANLAKTPERFGSFDDSTKYGGAVPSEHYLRDVWRLYFSKLPVLEVDGVSWTLEEYQHRLMQRWDGEVLGGDASFKFAKIIRLGARAGEERSRPVYGLFTVFNEYEQVVWQRPMKTGALSELVEELKLFFM-RFVRNGFKVPTLWNTDDCCDDRQLLQRVFREFEEATWISLYLEDEVDA-GVQLELLP 239          
BLAST of mRNA_C-linearis_contig110.1454.1 vs. uniprot
Match: A0A6H5JCK3_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK3_9PHAE)

HSP 1 Score: 203 bits (516), Expect = 9.320e-61
Identity = 99/135 (73.33%), Postives = 113/135 (83.70%), Query Frame = 0
Query:   66 GFPQQPPSAHYLRDVWHKWFYEIPVVQVYGCSWTREE------YLQMRAQLIDGRLLAGDASFKYAKVIRLSTGADGTRARPVYGIFTIMNEYDQVVFSKAMATASVHDLKNDLKMMFVKRFLGHGFKLPVMFYT 194
            G  ++ PSAHYL D+WHKWFYE+P+V+    +W   +      YLQ RAQL+DGRLLAGDASFKYAKVIRL TG DGTRARPVYGIFTIMNEYDQVVFSKAM TASVHDLK+DLKMMFV+RF+GHGFKLPV+ +T
Sbjct:    6 GLNRRHPSAHYLGDIWHKWFYEMPMVK----TWVTTDALGHVNYLQRRAQLVDGRLLAGDASFKYAKVIRLPTGPDGTRARPVYGIFTIMNEYDQVVFSKAMKTASVHDLKSDLKMMFVQRFVGHGFKLPVILFT 136          
BLAST of mRNA_C-linearis_contig110.1454.1 vs. uniprot
Match: A0A6H5K4A9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4A9_9PHAE)

HSP 1 Score: 189 bits (479), Expect = 1.020e-55
Identity = 103/234 (44.02%), Postives = 145/234 (61.97%), Query Frame = 0
Query:    1 VLDRLADDLLEGKGFSAASKSLTKAYNAKYFSHVRSYVSLAKRRIAKQRGIYGQHADLGVIPKSFG-------FPQQPPSAHYLRDVWHKWFYEIPVVQVYGCSWTREEYLQMRAQLIDGRLLAGDASFKYAKVIRLSTGADGTRARPVYGIFTIMNEYDQVVFSKAMATASVHDLKNDLKMMFVKRFLGHGFKLPVMFYTDECCEDRQLLLTMFKEIESETGARLYVADEKGA 227
            ++ RLADDL+ GKGFSAA+K++ +A+  K+      Y SL   R     GI+ + A+L   P+ FG       +    PS HYLRDV   +F ++PV++V    WT EEY     Q  DG +L GDASFK+AK+IRL   A   R RPVYG FT+ NE +QVV+ + M T ++ +L  +LK++F+ RF+ + FK+P ++ T +CC+DRQLL  + +E E ETG RLY  DE  A
Sbjct:   68 MVGRLADDLVRGKGFSAAAKNILQAHTTKFMVDQLKYTSLVNTRRTSS-GIF-RSANLAKTPERFGSFDDSTKYGGAVPSEHYLRDVRRFYFSKLPVLEVDSVDWTLEEYQHRLMQRWDGDILGGDASFKFAKIIRLGAKAGEERTRPVYGFFTVFNECEQVVWQRLMKTGALSELAEELKLLFM-RFVRNDFKVPTLWNTHDCCDDRQLLQRILREFEEETGIRLYREDEVDA 298          
BLAST of mRNA_C-linearis_contig110.1454.1 vs. uniprot
Match: A0A6H5JYR4_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYR4_9PHAE)

HSP 1 Score: 191 bits (485), Expect = 9.210e-54
Identity = 93/122 (76.23%), Postives = 108/122 (88.52%), Query Frame = 0
Query:  113 GRLLAGDASFKYAKVIRLSTGADGTRARPVYGIFTIMNEYDQVVFSKAMATASVHDLKNDLKMMFVKRFLGHGFKLPVMFYTDECCEDRQLLLTMFKEIESETGARLYVADEKGAPGVEVLP 234
            G +  GDASFKYAKVIRL+TG DGTRARPVY IFTIMNEY+QV+FSK M+TASV+DLKNDLKM+FVKRF+GHGFKLPV+FY+D+CCEDRQLLL+MFKEIESE   RLY A  +GA  +E+LP
Sbjct:   10 GHVKTGDASFKYAKVIRLATGEDGTRARPVYEIFTIMNEYNQVIFSKVMSTASVYDLKNDLKMLFVKRFVGHGFKLPVIFYSDDCCEDRQLLLSMFKEIESEDHVRLYDAAAEGA--IELLP 129          
BLAST of mRNA_C-linearis_contig110.1454.1 vs. uniprot
Match: A0A6H5KDX0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX0_9PHAE)

HSP 1 Score: 177 bits (449), Expect = 7.210e-50
Identity = 103/243 (42.39%), Postives = 140/243 (57.61%), Query Frame = 0
Query:    1 VLDRLADDLLEGKGFSAASKSLTKAYNAKYFSHVRSYVSLAKRRIAKQRGIYGQHADLGVIPKSFG-------FPQQPPSAHYLRDVWHKWFYEIPVVQVYGCSWTREEYLQMRAQLIDGRLLAGDASFKYAKVIRLSTGADGTRARPVYGIFTIMNEYDQVVFSKAMATASVHDLKNDLKMMFVKRFLGHGFKLPVMFYTDECCEDRQLLLTMFKEIESETGARLYVADEKGAPGV--EVLP 234
            +++RLADDL+ GK FSAA+K++ +A+  K+      Y SL   R     GI+ + A+L   P+ FG       +    PS HYLRDVW  +F ++PV++V    WT EEY     Q  DG +L GDASFK+AK+IRL   A   R RPVYG FT+ NEY+Q                     +F  RF+ +GFK+P ++ TD+CC+DRQLL  +F+E E  TG  LY+ DE  A GV  E+LP
Sbjct:  174 MVNRLADDLVHGKDFSAAAKNIRQAHTTKFMVDQLKYTSLVNTRRTSS-GIF-RSANLANTPERFGSFDDSTKYGGAVPSEHYLRDVWRLYFPKLPVLEVDSVDWTLEEYQHRLMQRWDGDILGGDASFKFAKIIRLGAKAGEERTRPVYGFFTVFNEYEQ---------------------LFFMRFVRNGFKVPTLWNTDDCCDDRQLLQRIFREFEEVTGISLYLEDEVDA-GVQLELLP 392          
BLAST of mRNA_C-linearis_contig110.1454.1 vs. uniprot
Match: A0A6H5JQG2_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQG2_9PHAE)

HSP 1 Score: 179 bits (453), Expect = 7.260e-48
Identity = 107/269 (39.78%), Postives = 153/269 (56.88%), Query Frame = 0
Query:    1 VLDRLADDLLEGKGFSAASKSLTKA--------------------------YNAKYFSHVRSYVSLAKRRIAKQRGIYGQHADLGVIPKSFG-------FPQQPPSAHYLRDVWHKWFYEIPVVQVYGCSWTREEYLQMRAQLIDGRLLAGDASFKYAKVIRLSTGADGTRARPVYGIFTIMNEYDQVVFSKAMATASVHDLKNDLKMMFVKRFLGHGFKLPVMFYTDECCEDRQLLLTMFKEIESETGARLYVADEKGAPGV--EVLP 234
            ++DRLADDL+ GKGFSAA+K++ +                              K+      Y SL   R     GI+ + A+    P+ FG       +    PS HYLRDVW  ++ ++PV++V G  WT EEY     Q  DG +L+GDASFK+AK+IRL   A   R++PVYG+FT+ NEY+QVV+ + M T ++ +L  +LK  F  RF+ +GFK+  ++ TD+CC+DRQLL  +F+E E  TG  L++ DE  A GV  E+LP
Sbjct:  208 MVDRLADDLVHGKGFSAAAKNICQVNVHFLICSVLKITXXXXXXXXXXXXXXTTKFMVDQLKYTSLVNSRRTSS-GIF-RSANHAKTPERFGSFDDSTKYGGAVPSEHYLRDVWWLYYSKLPVLEVDGVGWTLEEYQHRLMQRWDGEVLSGDASFKFAKIIRLGARAGEERSKPVYGLFTVFNEYEQVVWQRPMKTGALSELVEELKPFF-NRFVRNGFKVFTLWNTDDCCDDRQLLQRVFREFEEATGISLHLEDEVDA-GVQLELLP 472          
BLAST of mRNA_C-linearis_contig110.1454.1 vs. uniprot
Match: A0A6H5KE68_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE68_9PHAE)

HSP 1 Score: 151 bits (381), Expect = 8.210e-42
Identity = 79/162 (48.77%), Postives = 105/162 (64.81%), Query Frame = 0
Query:    1 VLDRLADDLLEGKGFSAASKSLTKAYNAKYFSHVRSYVSLAKRRIAKQRGIYGQHADLGVIPKSFG-------FPQQPPSAHYLRDVWHKWFYEIPVVQVYGCSWTREEYLQMRAQLIDGRLLAGDASFKYAKVIRLSTGADGTRARPVYGIFTIMNEYDQV 155
            ++DRLADDL+ GKGFSAA+K + +A+  K+ +    YVSLA  R + +  ++G       +P  FG       +    PS HYLRDVW  +F E+PV++V G  WTRE+YL    Q  DG +LAGDASFK+AK+IRL   A G R RPV+GIFT+ NEY+QV
Sbjct:   76 LVDRLADDLVHGKGFSAAAKYIRQAHTTKFMAFQLKYVSLADARRSSRVSLFGA----APVPVKFGSFDDTEKYCGAVPSDHYLRDVWRTYFSELPVLEVKGVKWTREDYLHCVHQRWDGTVLAGDASFKFAKIIRLGATAHGERTRPVHGIFTVFNEYEQV 233          
BLAST of mRNA_C-linearis_contig110.1454.1 vs. uniprot
Match: A0A6H5KYH3_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYH3_9PHAE)

HSP 1 Score: 156 bits (394), Expect = 1.240e-41
Identity = 88/204 (43.14%), Postives = 124/204 (60.78%), Query Frame = 0
Query:   40 LAKRRIAKQRGIYGQHADLGVIPKSFG-------FPQQPPSAHYLRDVWHKWFYEIPVVQVYGCSWTREEYLQMRAQLIDGRLLAGDASFKYAKVIRLSTGADGTRARPVYGIFTIMNEYDQVVFSKAMATASVHDLKNDLKMMFVKRFLGHGFKLPVMFYTDECCEDRQLLLTMFKEIESETGARLYVADEKGAPGV--EVLP 234
            L +    K  GI+ +  +L   P+ FG       +    PS HYLRDV   +F ++PV++V    WT EEY     Q  DG +L GDASFK+AK+IRL   A   R RPVYG FT+ +EY+QVV+ + M T ++ +L  +LK+ F+ RF+ +GFK+P ++ TD+CC+D QLL  + +E E  TG  LY+ DE  A GV  E+LP
Sbjct:    2 LLQAHTTKFMGIF-RSTNLAKTPERFGSFDDSTKYGGAVPSEHYLRDVRRLYFSKLPVLEVDSVDWTLEEYHHRLMQRWDGDILGGDASFKFAKIIRLRAKAGEERTRPVYGSFTVFDEYEQVVWQRPMKTGALSELAEELKLFFM-RFVRNGFKVPTLWNTDDCCDDLQLLQRILREFEEVTGISLYLEDEVDA-GVQLELLP 202          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig110.1454.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIV2_ECTSI2.240e-11574.903'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5K4D4_9PHAE1.690e-7059.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVB4_ECTSI6.710e-6446.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JCK3_9PHAE9.320e-6173.333'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5K4A9_9PHAE1.020e-5544.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JYR4_9PHAE9.210e-5476.233'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5KDX0_9PHAE7.210e-5042.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQG2_9PHAE7.260e-4839.783'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5KE68_9PHAE8.210e-4248.77Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KYH3_9PHAE1.240e-4143.143'-5' exonuclease domain-containing protein n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig110contigC-linearis_contig110:196927..198085 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig110.1454.1mRNA_C-linearis_contig110.1454.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig110 196927..198085 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig110.1454.1 ID=prot_C-linearis_contig110.1454.1|Name=mRNA_C-linearis_contig110.1454.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=234bp
VLDRLADDLLEGKGFSAASKSLTKAYNAKYFSHVRSYVSLAKRRIAKQRG
IYGQHADLGVIPKSFGFPQQPPSAHYLRDVWHKWFYEIPVVQVYGCSWTR
EEYLQMRAQLIDGRLLAGDASFKYAKVIRLSTGADGTRARPVYGIFTIMN
EYDQVVFSKAMATASVHDLKNDLKMMFVKRFLGHGFKLPVMFYTDECCED
RQLLLTMFKEIESETGARLYVADEKGAPGVEVLP
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