prot_C-linearis_contig11.1360.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig11.1360.1
Unique Nameprot_C-linearis_contig11.1360.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length664
Homology
BLAST of mRNA_C-linearis_contig11.1360.1 vs. uniprot
Match: D7FXX3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXX3_ECTSI)

HSP 1 Score: 353 bits (906), Expect = 2.330e-115
Identity = 184/211 (87.20%), Postives = 190/211 (90.05%), Query Frame = 0
Query:    1 MASAVDRVQIRLQEAMDQGSQASLGQAIDASKGVNGLKQLRRSAKARLKQLSADQNRSMIGSGSSHMP--QPAEAPLTWRTSEQGGRYRAVAHLPTSIIGWVIGHKGCNARMLKQQTGTELWVDVPGQCVIIESRAALEVEGGMEAVNDFVKTAPTFIAKVQSGSGGGITQTVQCPVHLLPSIQRLSRKIQAESGANCVFANCKMSTFCVT 209
            MASAVDRVQ+RLQEAMDQG+QASLGQAIDASKGVNGLKQLRRSAKARLKQLSADQNRSMIGS        Q  E PLTWRTSEQGGRYRAVAHLPTSIIGWVIGHKGCNARMLKQQTGTELWVDVPGQCVI+ESRA  EVEG ME VNDFVKTAPTFIAK QS SGGG+TQTVQCPV+LLPSIQRLSRKIQAESGANCVFANCK+  F  T
Sbjct:    1 MASAVDRVQMRLQEAMDQGNQASLGQAIDASKGVNGLKQLRRSAKARLKQLSADQNRSMIGSRMQQQQHQQTTEEPLTWRTSEQGGRYRAVAHLPTSIIGWVIGHKGCNARMLKQQTGTELWVDVPGQCVIVESRAIQEVEGAMETVNDFVKTAPTFIAKAQSTSGGGVTQTVQCPVNLLPSIQRLSRKIQAESGANCVFANCKVRPFSTT 211          
BLAST of mRNA_C-linearis_contig11.1360.1 vs. uniprot
Match: A0A6H5KRR8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRR8_9PHAE)

HSP 1 Score: 234 bits (597), Expect = 1.690e-70
Identity = 112/125 (89.60%), Postives = 117/125 (93.60%), Query Frame = 0
Query:   82 QGGRYRAVAHLPTSIIGWVIGHKGCNARMLKQQTGTELWVDVPGQCVIIESRAALEVEGGMEAVNDFVKTAPTFIAKVQSGSGGGITQTVQCPVHLLPSIQRLSRKIQAESGANCVFANCKMSTF 206
            +GGRYRAVAHLPTSIIGWVIGHKGCNARMLKQQTGTELWVDVPGQCVIIESRA  E+EG ME VN+FVKTAPTFIAK QS SGGG+TQTVQCPVHLLPSIQRLSRKIQAESGANCVFANCK+  F
Sbjct:    3 KGGRYRAVAHLPTSIIGWVIGHKGCNARMLKQQTGTELWVDVPGQCVIIESRAIQELEGAMETVNNFVKTAPTFIAKAQSTSGGGVTQTVQCPVHLLPSIQRLSRKIQAESGANCVFANCKVRPF 127          
BLAST of mRNA_C-linearis_contig11.1360.1 vs. uniprot
Match: D7FXX2_ECTSI (SAM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXX2_ECTSI)

HSP 1 Score: 177 bits (450), Expect = 5.650e-49
Identity = 114/148 (77.03%), Postives = 127/148 (85.81%), Query Frame = 0
Query:  518 LGLPGLGFLEESAG-AGSRLGYEQEFVDDERRTSSCGSGEYGGGEAHGFP-NHSRQAGSVGSLGVGXXXXXXXXXXXXXXXXXXXXXXPLEGSIDELLEELGLEKYLGVFRDAEVDLKTLCIMQEQDYRELGILKGPRVKIMHHIGSR 663
            +GLPGLGFLEESAG AGSRLGYE++  +DERRTSSCGSG++GGGEA GFP +HSRQ GSVGSLG GXXXXXXXXXXXXXXX          G+IDELL+E+GL KY+ VFR+AEVDL TLCIM EQD+RELGILKGPRVKIMHHIGSR
Sbjct:   11 IGLPGLGFLEESAGGAGSRLGYERDG-EDERRTSSCGSGDFGGGEASGFPPHHSRQPGSVGSLGAGXXXXXXXXXXXXXXXRGP------RGTIDELLDEIGLMKYVDVFREAEVDLATLCIMSEQDFRELGILKGPRVKIMHHIGSR 151          
BLAST of mRNA_C-linearis_contig11.1360.1 vs. uniprot
Match: A0A6H5L4F3_9PHAE (SAM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4F3_9PHAE)

HSP 1 Score: 151 bits (382), Expect = 4.310e-38
Identity = 165/253 (65.22%), Postives = 174/253 (68.77%), Query Frame = 0
Query:  418 PLPPPHTELAPSHYHNPASAPVTPVGTAAPFHASNAT-----GXXXXXPSSDLSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLG-LPGLGFLEESAG-AGSRLGYEQEFVDDERRTSSCGSGEYGGGEAHGFPNHSRQAGSVGSLGVGXXXXXXXXXXXXXXXXXXXXXXPLEGSIDELLEELGLEKYLGVFRDAEVDLKTLCIMQEQDYRELGILKGPRVKIMHHIGSR 663
            PLPPPHTELAPSHY  P SAP TP GTAAPF  S+A       XXXXX   DLSF                XXXXXXXXXXXXXXXXXXXXXXXXXXXX  XXXX   LPGLGFLEESAG AGSRLGYE++  D+                           GSVGSLG GXXXXXXXXXXXXXXXX      PLEG+IDELL+E+GL KYL VFR+AEVDL TLCIM EQD+RELGILKGPRVKIMHHIGSR
Sbjct:   27 PLPPPHTELAPSHY--PLSAPATPGGTAAPFQGSSAATPVGGXXXXXXXXXDLSFFSFGVGGASPPAPQGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPXXXXXXXLPGLGFLEESAGGAGSRLGYERDGDDE--------------------------PGSVGSLGAGXXXXXXXXXXXXXXXXAAGC--PLEGTIDELLDEIGLIKYLDVFREAEVDLATLCIMSEQDFRELGILKGPRVKIMHHIGSR 249          
BLAST of mRNA_C-linearis_contig11.1360.1 vs. uniprot
Match: D7FQB1_ECTSI (SAM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQB1_ECTSI)

HSP 1 Score: 66.6 bits (161), Expect = 1.020e-7
Identity = 41/145 (28.28%), Postives = 70/145 (48.28%), Query Frame = 0
Query:   84 GRYRAVAHLPTSIIGWVIGHKGCNARMLKQQTGTELWVDVPGQCVIIESRAALEVEGGMEAVNDFVKTAPTFIAKVQSGSGGGITQTVQCPVHLLPSI--QRLSRKIQAESGANCVFANCKMSTFCVTGDRKTVDIAVGMLKRLI 226
            G  R    +   ++GWVIG  G   + +K +TG  +WVD     + I       VE   ++V+ +V  AP     V++     +T+T++CP  LL  +  +    +I  E+ A  V  N K+    V GD ++VD+A   ++ +I
Sbjct:   60 GFVRCDMDIDAEVVGWVIGKNGSTIKDMKHKTGCNMWVDQRALKLTITGPDLPSVEHAAKSVDAYVAAAPIKAGAVEAA----VTKTIECPPQLLDDLGDRTTIARIVKETHAQVV-VNKKIGRIIVRGDHRSVDLAYESVRAMI 199          
BLAST of mRNA_C-linearis_contig11.1360.1 vs. uniprot
Match: A0A813JZV9_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813JZV9_POLGL)

HSP 1 Score: 53.5 bits (127), Expect = 5.220e-5
Identity = 20/52 (38.46%), Postives = 39/52 (75.00%), Query Frame = 0
Query:  609 IDELLEELGLEKYLGVFRDAEVDLKTLCIMQEQDYRELGILKGPRVKIMHHI 660
            ++ L++++GLE+++  F+  EVDL  L + +E+D ++LG+ KGPRVK++  +
Sbjct:    1 METLMQQIGLERFIPAFQAEEVDLDALSLFEEKDLQDLGLPKGPRVKLLRAV 52          
BLAST of mRNA_C-linearis_contig11.1360.1 vs. uniprot
Match: A0A1X7U136_AMPQE (SAM domain-containing protein n=3 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7U136_AMPQE)

HSP 1 Score: 57.8 bits (138), Expect = 8.250e-5
Identity = 25/56 (44.64%), Postives = 40/56 (71.43%), Query Frame = 0
Query:  608 SIDELLEELGLEKYLGVFRDAEVDLKTLCIMQEQDYRELGILKGPRVKIMHHIGSR 663
            ++  LL++LGL KY  +F+  E+D   L +M E+D+ E+GI KGPRVK+++ IG +
Sbjct: 2688 NLSGLLDKLGLSKYHNLFQKNEIDHHALLLMSEKDFAEVGIPKGPRVKLLNAIGRK 2743          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1360.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FXX3_ECTSI2.330e-11587.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KRR8_9PHAE1.690e-7089.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXX2_ECTSI5.650e-4977.03SAM domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5L4F3_9PHAE4.310e-3865.22SAM domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FQB1_ECTSI1.020e-728.28SAM domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A813JZV9_POLGL5.220e-538.46Hypothetical protein (Fragment) n=1 Tax=Polarella ... [more]
A0A1X7U136_AMPQE8.250e-544.64SAM domain-containing protein n=3 Tax=Amphimedon q... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 242..272
NoneNo IPR availableCOILSCoilCoilcoord: 34..54
NoneNo IPR availablePANTHERPTHR14445GRB10 INTERACTING GYF PROTEINcoord: 59..276
NoneNo IPR availablePANTHERPTHR14445:SF41coord: 59..276
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 85..156
score: 9.351
IPR013761Sterile alpha motif/pointed domain superfamilyGENE3D1.10.150.50coord: 607..663
e-value: 3.4E-13
score: 51.1
IPR013761Sterile alpha motif/pointed domain superfamilySUPERFAMILY47769SAM/Pointed domaincoord: 606..660
IPR001660Sterile alpha motif domainPFAMPF00536SAM_1coord: 608..660
e-value: 5.0E-10
score: 39.7
IPR001660Sterile alpha motif domainPROSITEPS50105SAM_DOMAINcoord: 608..648
score: 8.581
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 81..152

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig11contigC-linearis_contig11:3116864..3122484 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig11.1360.1mRNA_C-linearis_contig11.1360.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig11 3115898..3124347 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig11.1360.1 ID=prot_C-linearis_contig11.1360.1|Name=mRNA_C-linearis_contig11.1360.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=664bp
MASAVDRVQIRLQEAMDQGSQASLGQAIDASKGVNGLKQLRRSAKARLKQ
LSADQNRSMIGSGSSHMPQPAEAPLTWRTSEQGGRYRAVAHLPTSIIGWV
IGHKGCNARMLKQQTGTELWVDVPGQCVIIESRAALEVEGGMEAVNDFVK
TAPTFIAKVQSGSGGGITQTVQCPVHLLPSIQRLSRKIQAESGANCVFAN
CKMSTFCVTGDRKTVDIAVGMLKRLIAEGNVDNPAGASGNGNAQHQQQQQ
QHQQQQQQHQQHQQQQQQQQQQHQRRHSSGSGNGMNGNNNGMNGGDRRAA
AGAGEMGQRLGRVESDMSRSDPNSPPPTAPCSPEVVQAANAWGNGAPSHL
RAWNTPQQYHHHLQQQQQQQQQYHQQQQQQQQPDQPPCLSRPALAPTAAT
AGATPTLVGIAGGGGGGPLPPPHTELAPSHYHNPASAPVTPVGTAAPFHA
SNATGGGGGGPSSDLSFFSFGVGGVGGVSNNGNAASPPAPGVAPSTRAST
APTPGVKGGLSGGGGGGLGLPGLGFLEESAGAGSRLGYEQEFVDDERRTS
SCGSGEYGGGEAHGFPNHSRQAGSVGSLGVGSGSGGGGAAGTGGGGGGGG
CGCPLEGSIDELLEELGLEKYLGVFRDAEVDLKTLCIMQEQDYRELGILK
GPRVKIMHHIGSR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013761SAM/pointed_sf
IPR001660SAM
IPR036612KH_dom_type_1_sf