prot_C-linearis_contig11.1355.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig11.1355.1
Unique Nameprot_C-linearis_contig11.1355.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length631
Homology
BLAST of mRNA_C-linearis_contig11.1355.1 vs. uniprot
Match: D8LKM8_ECTSI (TAZ-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKM8_ECTSI)

HSP 1 Score: 186 bits (473), Expect = 4.970e-48
Identity = 161/383 (42.04%), Postives = 188/383 (49.09%), Query Frame = 0
Query:   19 VEAQTNSKACAKRLDLLMERSFGDLQFLLEEFSKLEAVLSPESKEVD-GGVAEADSKLVKLRFFISHVRQTMARMRDARSGRDPLSMPQLALLEEHIATSIAPVKERLVSQMDRASASSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTRHEVSATDGEEGGHSTSRXXXXXXXXXXGFGGESLPSQDGAGEAEAEDGAGSLVGGGRGEXXXXXXXXXXXEWSVGMELSGDVFGTGGSFCLGLVSSAPTPTRPTGGTGRGCCSSSAFSRVTPTASIGSPFSRLCWSGGGGGGL-------DLIGGGRTPLPEHNRSRRDHLDMLSQLEAEGVFAADDSYSPCG-----RDPGMLGGVSFSP 388
            V+A  +S+  ++RLDLLM++SFGDLQFL +EF+KLE V++P  +E D  G A  DSKL +LRFF +HVR+TMARMRDARSGRDP+SM QLALLEEHIATSIAP                 XXXXXXXXXXXXXXXXXX                                                                                                        EWSVG+EL  + FG+GGS  LGLVS AP      G  G      +  +R+TP AS  S  SRLCW  GGG G        D+  GGR     H  +RRDH+DMLSQLEAEGVFAADDSYSPCG          +GGV+FSP
Sbjct:   53 VQASPDSEV-SRRLDLLMDKSFGDLQFLSDEFAKLEVVVAPAVQERDDSGKAGTDSKLGRLRFFTTHVRRTMARMRDARSGRDPMSMSQLALLEEHIATSIAPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE-------------------------------------------------------------------------------------------------------EWSVGLELHDEAFGSGGSVSLGLVSPAPASVPDRGADGGIYDPHACSARLTP-ASSSSSLSRLCWGSGGGTGXXXXXXXRDVARGGRP----HRHTRRDHVDMLSQLEAEGVFAADDSYSPCGGXXXXXXXXXMGGVAFSP 326          
BLAST of mRNA_C-linearis_contig11.1355.1 vs. uniprot
Match: A0A6H5KT72_9PHAE (TAZ-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT72_9PHAE)

HSP 1 Score: 127 bits (319), Expect = 5.350e-27
Identity = 87/184 (47.28%), Postives = 100/184 (54.35%), Query Frame = 0
Query:  237 GAGSLVGGGRGEXXXXXXXXXXXEWSVGMELSGDVFGTGGSFCLGLVSSAPTPTRPTGGTGRGCCSSSAFSRVTPTASIGSPFSRLCWSGGG------GGGLDLIGGGRTPLPEHNRSRRDHLDMLSQLEAEGVFAADDSYSPCG-----RDPGMLGGVSFSPFMVSGAGKTLPSRTTGACGDE 409
            GA  LVG GR E           EWSVG+EL  + FG+GGS  LGLVS AP      G  G      +  +R+TPT+S  S  SRLCW  GG      GGG D+  GGR        +RRDH+DMLSQLEAEGVFAADDSYSPCG          +GGV+FSP   S  G    S   G C +E
Sbjct:    6 GAEELVGAGREEEE---------EWSVGLELHDETFGSGGSVSLGLVSPAPAAVPDRGADGGIYDPHACSARMTPTSSSSS-LSRLCWGSGGTGDSAGGGGRDVTRGGRP----RRHTRRDHVDMLSQLEAEGVFAADDSYSPCGGXXXXXXXXXMGGVAFSPEARSMFGGDGESSRPGGCREE 175          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1355.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LKM8_ECTSI4.970e-4842.04TAZ-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KT72_9PHAE5.350e-2747.28TAZ-type domain-containing protein n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig11contigC-linearis_contig11:3077848..3081423 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig11.1355.1mRNA_C-linearis_contig11.1355.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig11 3077466..3081423 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig11.1355.1 ID=prot_C-linearis_contig11.1355.1|Name=mRNA_C-linearis_contig11.1355.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=631bp
MSNDEQNPGPGQPADAVAVEAQTNSKACAKRLDLLMERSFGDLQFLLEEF
SKLEAVLSPESKEVDGGVAEADSKLVKLRFFISHVRQTMARMRDARSGRD
PLSMPQLALLEEHIATSIAPVKERLVSQMDRASASSDGGSGSGSGSGSGS
SLAVLTLSTGSAAAAATARGRSGSTSSTSSSSGSGGGTRHEVSATDGEEG
GHSTSRSSSVSSSMGGGFGGESLPSQDGAGEAEAEDGAGSLVGGGRGEQQ
QEEGGEDDDEWSVGMELSGDVFGTGGSFCLGLVSSAPTPTRPTGGTGRGC
CSSSAFSRVTPTASIGSPFSRLCWSGGGGGGLDLIGGGRTPLPEHNRSRR
DHLDMLSQLEAEGVFAADDSYSPCGRDPGMLGGVSFSPFMVSGAGKTLPS
RTTGACGDEGGCDMTPVPMREVKEERDGGEDKGTEEEEEESGGGAPQKAA
AAFFLPLKSVVKPAVAGGVGAVVSALPEAVEATPVGVGATVSPERAAVVA
VAPSGVKDGASPAAATSSVSGVTGTPLIRPKCEPAAAASTRAAVSLCSHA
AAGGARVAKPVAAAAAAAAAAAKEAAEEGAPTIPVLSAGDASTAAATNRS
VPPPGTTCAGAGATGGDTKMAAAAAAAVTVA
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