prot_C-linearis_contig11.1338.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig11.1338.1
Unique Nameprot_C-linearis_contig11.1338.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length502
Homology
BLAST of mRNA_C-linearis_contig11.1338.1 vs. uniprot
Match: D7FXW4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXW4_ECTSI)

HSP 1 Score: 356 bits (913), Expect = 3.450e-111
Identity = 244/507 (48.13%), Postives = 305/507 (60.16%), Query Frame = 0
Query:   10 KAEPSPEAQAALAALPPAERLLAEVQAAFEAADVPMSDYTSLDAAGLACLLPPSVVARSARLFLEEKIARW--AGYILCNIPSHGDAAPEIFEDRP--PQAPQQSPQGVTAAXXXXXXXXXXXXSPKSRGGAGEGLDSXXXXXXXXXXXXXXXXXATDVVAEHLRPTHVVYLEASLEHIVEQQGRR-GAGAAAEAGGAGGKEAGAKLRARLERYFAKEQRAEPPE---GEDSASAENAPPGDKKRRPSNSNGPDASKSHAXXXXXXXXXXXXXXXSQDEGRWIPATARSLQDRYAVRVQAINAEDGQGGGEDALGAVVAAVDEHVCGGEAPGFVWMLSDGEDDGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDATISKRGTADAAASRNN--------LSLAEVLAKLTARDAREVEQRTRRHRDFLTEGVVPQVAAGLVATAEAQPDDIFEFLAEYLISAGRELQSKAEKEAAERYEAGLKLLQELEANDKKRAAA 500
            +AEPSPEAQAAL ALPP ERLLA+VQAAFEAAD+PMS+YT+LDA GLA +L PS++AR+ARL LEEK  +W  +GYILC+IPSHGD AP+IF D+   P  P+ SP     A            SPKSRGG   G++                    + V    RPTHVVYL ASLE+IV QQGR  GAG A + GG  GKEA AKLR  +ER+FA+EQ+AE P+   G        + PG +KR   N +      +                  +++G WIPATAR+LQ R+ ++ QA++ E  +  G+  +  VV AV +H+CG E PGFVWML     D                                       D   ++  +A+ AA+RN+        L+L+EVLAKLTARDA+EVE RTRRHR+FLTEGVVPQVAAGLVA AEAQP+++FEFLA YLI AG+ LQ KAE+EAA +Y+AGL LL+ELEAND KR AA
Sbjct:  274 EAEPSPEAQAALEALPPKERLLADVQAAFEAADMPMSEYTALDAGGLARVLSPSIIARAARLVLEEKRLQWTCSGYILCDIPSHGDVAPDIFADQALGPSPPRPSP--TIPAGDSRAGVGGTPGSPKSRGG---GVEGRAGSDSPLAAMVPTSDAQPEEVVGGFRPTHVVYLAASLEYIVAQQGREVGAGTATDTGG--GKEAEAKLRGDIERFFAQEQQAEQPQTTGGGTMPIGTASSPGGQKRTGDNGSSNAIDNAGGGTAETAADENGYRDTGEEQG-WIPATARALQHRFLIKAQAVDVEAVETDGD--VSGVVDAVHDHLCGAETPGFVWMLRGDSVDVYVEEGEHADRNMTHKKQADGGEAGANGEEEANAADGGIDTDTTR--SAEPAAARNDSNPEWSDDLNLSEVLAKLTARDAKEVEMRTRRHRNFLTEGVVPQVAAGLVAAAEAQPENVFEFLANYLIRAGQALQRKAEEEAASKYQAGLALLEELEANDNKRTAA 768          
BLAST of mRNA_C-linearis_contig11.1338.1 vs. uniprot
Match: A0A6H5KT96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT96_9PHAE)

HSP 1 Score: 291 bits (744), Expect = 3.670e-86
Identity = 243/485 (50.10%), Postives = 292/485 (60.21%), Query Frame = 0
Query:    9 AKAEPSPEAQAALAALPPAERLLAEVQAAFEAADVPMSDYTSLDAAGLACLLPPSVVARSARLFLEEKIARW------------------AGYILCNIPSHGDAAPEIFEDRPPQAPQQSPQGVTAAXXXXXXXXXXXXSPKSRGGAGEGLDSXXXXXXXXXXXXXXXXXATDVVAEHLRPTHVVYLEASLEHIVEQQGRRGAGAAAEAGGAGGKEAGAKLRARLERYFAKEQRAEPPE---GEDSASAENAPPGDKKRRPSNSNGPDASKSHAXXXXXXXXXXXXXXXSQDEGRWIPATARSLQDRYAVRVQAINAEDGQGGGEDALGAVVAAVDEHVCGGEAPGFVWMLSDGEDDGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDATISKRGT--ADAAASRNN--------LSLAEVLAKLTARDAREVEQRTRRHRDFLTEGVVPQVAAGLVATAEAQPDDIFEFLAEYLI 462
            AKAEPSPEAQA L ALPP ERLLA+VQAAFEAAD+PMS+Y +LDA GLA +L PS++AR+ARL LEEK  +W                  +GYILC+IPSHGD APEIF D+P              XXXXXX      SPKSRGG   G++                    + V    RPTHVVYL ASL +IV QQGR   GA          EA AKLR  +ER+FA+EQ+AE PE   G     A  + PG++KR  +  NG   +  +A               + +E  WIPATAR+LQ R+ ++ QA++ E  +  G+  +  VV AV +H+CG E PGFVWML     D  XXXXXXXXXXX            XXXXXXXXXXXXXX        T  A+ AA+RN+        L+L+EVLAKLTARDA+EVE RTRRHR+FLTEGVVPQVAAGLVA AEAQP+++FEFLA YLI
Sbjct:  305 AKAEPSPEAQADLEALPPKERLLADVQAAFEAADMPMSEYNALDAGGLARVLSPSIIARAARLVLEEKRLQWTCRRVVLVVVVAVDVVGDSGYILCDIPSHGDVAPEIFADQPLGPSPPRXXXXXXXXXXXXXEGGTPGSPKSRGG---GVEGRAGSGSPLAAMVLTSDAQPEAVVGGFRPTHVVYLAASLNYIVAQQGRE-VGAGXXXXXXXXXEAEAKLRGDIERFFAQEQQAEQPETTGGGTMPIATASSPGEQKR--TGDNGSSNATDNAGGGTAGTADENGYRETGEEQGWIPATARALQHRFLIKAQAVDVEAVEIDGD--VSGVVDAVHDHLCGAETPGFVWMLRGDSVDVXXXXXXXXXXXXDRNMTQKKRADGXXXXXXXXXXXXXXXXXXXXXTTRSAEPAAARNDSNPEWCDDLNLSEVLAKLTARDAKEVETRTRRHRNFLTEGVVPQVAAGLVAAAEAQPENVFEFLANYLI 781          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1338.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FXW4_ECTSI3.450e-11148.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KT96_9PHAE3.670e-8650.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.890.10coord: 419..471
e-value: 7.4E-6
score: 27.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig11contigC-linearis_contig11:2844156..2846983 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig11.1338.1mRNA_C-linearis_contig11.1338.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig11 2844156..2846983 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig11.1338.1 ID=prot_C-linearis_contig11.1338.1|Name=mRNA_C-linearis_contig11.1338.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=502bp
MPCFAAAPAKAEPSPEAQAALAALPPAERLLAEVQAAFEAADVPMSDYTS
LDAAGLACLLPPSVVARSARLFLEEKIARWAGYILCNIPSHGDAAPEIFE
DRPPQAPQQSPQGVTAAAAAAITNAGAGGSPKSRGGAGEGLDSSSPPTAT
NPDGGGGGGGATDVVAEHLRPTHVVYLEASLEHIVEQQGRRGAGAAAEAG
GAGGKEAGAKLRARLERYFAKEQRAEPPEGEDSASAENAPPGDKKRRPSN
SNGPDASKSHAASREQAGERENNGNRSQDEGRWIPATARSLQDRYAVRVQ
AINAEDGQGGGEDALGAVVAAVDEHVCGGEAPGFVWMLSDGEDDGGGAAA
AEGAGKGSAEGKRLRQGNSGDGEGGGGGGGGDNDATISKRGTADAAASRN
NLSLAEVLAKLTARDAREVEQRTRRHRDFLTEGVVPQVAAGLVATAEAQP
DDIFEFLAEYLISAGRELQSKAEKEAAERYEAGLKLLQELEANDKKRAAA
A*
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