prot_C-linearis_contig11.1307.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig11.1307.1
Unique Nameprot_C-linearis_contig11.1307.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length271
Homology
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BLAST of mRNA_C-linearis_contig11.1307.1 vs. uniprot
Match: D7FS42_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS42_ECTSI)

HSP 1 Score: 301 bits (771), Expect = 1.100e-98
Identity = 156/228 (68.42%), Postives = 183/228 (80.26%), Query Frame = 0 
Query:   43 MNIDIPCLLRALGVDERENDTGGKVVQGECETIFRLSTKKLQHLG-KGEFLRSYVAVDLALGKLGISFSKETLLRKANNAKEKTYDDNYRRIKNILGARVAPMGGNIANLAVKFSGASADRSLALLRKYQDACRSTVTAEHGDRLVGQYSTPGYHAAAFCVASVEDKFKLDRKAVADTVKLHPKDLDKICIDMVTKCGLSDLEHVAKAFRMEAPGSADRGKEARAARG 269
            MNIDIP LLRAL VDER + +GG  VQGECETIFRLS KK+     K EFLR YVA+DLALG LGI FSK+ LL KAN +K+K YDD Y+ ++N+LGARVAPMG ++AN+AVKF+GAS +RS+ALL+++QDAC + VT EH +RL G+YST  YHAAAFCVASV+DKFKLDRKAVA  VKL PKDLDKIC DMV KCG S LEH AK FR+E PGS DRG+EA   +G
Sbjct:    1 MNIDIPDLLRALEVDERVDGSGGNTVQGECETIFRLSEKKVPPGRLKKEFLRGYVAIDLALGTLGIPFSKKKLLEKANISKQKAYDDTYQYLRNVLGARVAPMGVSMANIAVKFTGASVERSMALLQRFQDACHAAVTVEHRERLAGRYSTAEYHAAAFCVASVQDKFKLDRKAVAAMVKLQPKDLDKICGDMVAKCGPSGLEHAAKVFRVETPGSGDRGQEAHKGKG 228
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1307.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FS42_ECTSI1.100e-9868.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.472.10coord: 146..239
e-value: 3.7E-7
score: 32.3
NoneNo IPR availablePRODOMPD315657coord: 86..200
e-value: 0.002
score: 98.0
IPR020529Origin recognition complex, subunit 6, metazoa/plantPANTHERPTHR13394ORIGIN RECOGNITION COMPLEX SUBUNIT 6coord: 66..238

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig11contigC-linearis_contig11:2573366..2577397 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig11.1307.1mRNA_C-linearis_contig11.1307.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig11 2572640..2577397 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig11.1307.1 ID=prot_C-linearis_contig11.1307.1|Name=mRNA_C-linearis_contig11.1307.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=271bp
MNHSVQQKCRGGALHSWTLWFGGSQALSRALSTTPLHDSTHTMNIDIPCL
LRALGVDERENDTGGKVVQGECETIFRLSTKKLQHLGKGEFLRSYVAVDL
ALGKLGISFSKETLLRKANNAKEKTYDDNYRRIKNILGARVAPMGGNIAN
LAVKFSGASADRSLALLRKYQDACRSTVTAEHGDRLVGQYSTPGYHAAAF
CVASVEDKFKLDRKAVADTVKLHPKDLDKICIDMVTKCGLSDLEHVAKAF
RMEAPGSADRGKEARAARGGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020529ORC6_met/pln