prot_C-linearis_contig11.1293.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-linearis_contig11.1293.1
Unique Name	prot_C-linearis_contig11.1293.1
Type	polypeptide
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length	192

Homology

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BLAST of mRNA_C-linearis_contig11.1293.1 vs. uniprot
Match: D8LMZ4_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMZ4_ECTSI)

HSP 1 Score: 134 bits (338), Expect = 1.180e-36
Identity = 67/77 (87.01%), Postives = 72/77 (93.51%), Query Frame = 0

Query:   20 MVIARSLKDAARLGSVTTSLLLRRSEDLMCQNLMCAKLGGACVCRLAVHLSRLRNLRKLDIAENGLGVLPEPVFELP 96
            MVIARSLKDAARLGS TTSLLLRRSEDL+CQNLMCAK+G ACVCRLAVHLSRL  L++LD+AEN LGVLPEPVFELP
Sbjct:    1 MVIARSLKDAARLGSATTSLLLRRSEDLVCQNLMCAKIGEACVCRLAVHLSRLGKLKELDVAENDLGVLPEPVFELP 77

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BLAST of mRNA_C-linearis_contig11.1293.1 vs. uniprot
Match: A0A1V9ZV51_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZV51_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 3.470e-16
Identity = 38/75 (50.67%), Postives = 57/75 (76.00%), Query Frame = 0

Query:   21 VIARSLKDAARLGSVTTSLLLRRSEDLMCQNLMCAKLGGACVCRLAVHLSRLRNLRKLDIAENGLGVLPEPVFEL 95
            +IA+SL+DAA   S    L+LR+S+DL+C+NLMC ++G ACVC+L++ L RL  L +LD++EN L +LP  +F+L
Sbjct:    1 MIAKSLRDAATHTSSVQKLVLRKSQDLVCRNLMCERVGEACVCKLSLVLERLPQLEELDVSENKLQMLPPSIFQL 75

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BLAST of mRNA_C-linearis_contig11.1293.1 vs. uniprot
Match: A0A836CFY3_9STRA (Leucine rich repeat protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFY3_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 3.870e-16
Identity = 41/76 (53.95%), Postives = 54/76 (71.05%), Query Frame = 0

Query:   21 VIARSLKDAARLGSV--TTSLLLRRSEDLMCQNLMCAKLGGACVCRLAVHLSRLRNLRKLDIAENGLGVLPEPVFE 94
            ++A SL +A+ +       SL+LR SEDL+C+N+MC KLGGAC+CRLAV L R   L+ LD+A+NGL  LPE V E
Sbjct:    9 LVAASLAEASSMAPQGGPVSLVLRSSEDLLCRNIMCEKLGGACLCRLAVCLGRCSGLQSLDLAKNGLATLPEAVLE 84

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BLAST of mRNA_C-linearis_contig11.1293.1 vs. uniprot
Match: T0QH27_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QH27_SAPDV)

HSP 1 Score: 80.5 bits (197), Expect = 7.550e-16
Identity = 39/75 (52.00%), Postives = 52/75 (69.33%), Query Frame = 0

Query:   21 VIARSLKDAARLGSVTTSLLLRRSEDLMCQNLMCAKLGGACVCRLAVHLSRLRNLRKLDIAENGLGVLPEPVFEL 95
            +IA+SL+DAA   S    L+LR+SEDL+C NLMC ++G ACVC+L+V L RL  L  LD++ N L  LP  +F L
Sbjct:    1 MIAKSLRDAATHTSAVRQLVLRKSEDLLCMNLMCERVGEACVCKLSVVLERLPQLEHLDVSRNNLKSLPPAIFSL 75

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BLAST of mRNA_C-linearis_contig11.1293.1 vs. uniprot
Match: A0A485L6B7_9STRA (Aste57867_16664 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L6B7_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 1.060e-14
Identity = 38/76 (50.00%), Postives = 53/76 (69.74%), Query Frame = 0

Query:   21 VIARSLKDAARLGSVTTSLLLRRSEDLMCQNLMCAKLGGACVCRLAVHLSRLRNLRKLDIAENGLGVLPEPVFELP 96
            +I RS++DAA        LLLRRSEDL+C+NLMC ++G AC+CR ++ L +L  L KLD++ N L  LP  +F+LP
Sbjct:  332 MIVRSVRDAAMHMGAVKELLLRRSEDLLCRNLMCERVGEACICRFSLVLEKLPQLTKLDVSHNNLHALPPALFQLP 407

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BLAST of mRNA_C-linearis_contig11.1293.1 vs. uniprot
Match: F0WI42_9STRA (Uncharacterized protein AlNc14C107G6249 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WI42_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 1.410e-14
Identity = 35/74 (47.30%), Postives = 51/74 (68.92%), Query Frame = 0

Query:   22 IARSLKDAARLGSVTTSLLLRRSEDLMCQNLMCAKLGGACVCRLAVHLSRLRNLRKLDIAENGLGVLPEPVFEL 95
            +A S +D A+ G+    L+L++S+DL+C+NLMC K+GGAC CRLA  L+ +  L  LD++ N L  +PE VF L
Sbjct:    5 VATSFRDVAKNGATIKKLILKKSQDLVCKNLMCEKIGGACACRLAHILTCVPKLTHLDLSNNSLETIPEAVFGL 78

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BLAST of mRNA_C-linearis_contig11.1293.1 vs. uniprot
Match: A0A1V9Z9Y8_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z9Y8_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 1.910e-14
Identity = 38/75 (50.67%), Postives = 53/75 (70.67%), Query Frame = 0

Query:   21 VIARSLKDAARLGSVTTSLLLRRSEDLMCQNLMCAKLGGACVCRLAVHLSRLRNLRKLDIAENGLGVLPEPVFEL 95
            +IA+SL++AA   +    LLLR+SEDL+C+NLMC ++G ACVC+L++ L RL  L  LD++ N LG LP  V  L
Sbjct:    1 MIAKSLREAATHTTAVRKLLLRKSEDLVCRNLMCERVGEACVCKLSLVLERLPELTHLDVSGNKLGALPPAVAAL 75

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BLAST of mRNA_C-linearis_contig11.1293.1 vs. uniprot
Match: A0A024GQG6_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GQG6_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 3.730e-14
Identity = 34/74 (45.95%), Postives = 51/74 (68.92%), Query Frame = 0

Query:   22 IARSLKDAARLGSVTTSLLLRRSEDLMCQNLMCAKLGGACVCRLAVHLSRLRNLRKLDIAENGLGVLPEPVFEL 95
            +A S + AA+ G+ T  L+L +S+DL+C+NLMC ++GGAC CRLA  L+ +  L  LD++ N L  +P+ VF L
Sbjct:    5 VATSFRQAAKSGAATRELILNKSQDLVCKNLMCERIGGACACRLAHILTCVPKLTHLDLSNNELETIPDAVFSL 78

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BLAST of mRNA_C-linearis_contig11.1293.1 vs. uniprot
Match: A0A067CF62_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CF62_SAPPC)

HSP 1 Score: 80.1 bits (196), Expect = 3.870e-14
Identity = 39/75 (52.00%), Postives = 52/75 (69.33%), Query Frame = 0

Query:   21 VIARSLKDAARLGSVTTSLLLRRSEDLMCQNLMCAKLGGACVCRLAVHLSRLRNLRKLDIAENGLGVLPEPVFEL 95
            +IA+SL+DAA   S    L+LR+SEDL+C NLMC ++G ACVC+L+V L RL  L  LD++ N L  LP  +F L
Sbjct:  382 MIAKSLRDAATHTSAVRQLVLRKSEDLLCMNLMCERVGEACVCKLSVVLERLPQLEHLDVSRNNLMSLPPAIFSL 456

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BLAST of mRNA_C-linearis_contig11.1293.1 vs. uniprot
Match: A0A6G0X207_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X207_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 2.940e-13
Identity = 36/75 (48.00%), Postives = 53/75 (70.67%), Query Frame = 0

Query:   21 VIARSLKDAARLGSVTTSLLLRRSEDLMCQNLMCAKLGGACVCRLAVHLSRLRNLRKLDIAENGLGVLPEPVFEL 95
            +I RS+++AA        L+LR+SEDL+C+NLMC ++G AC+CRL++ L +L NL  LD++ N L  LP  VF+L
Sbjct:  291 MIVRSVREAAMHMGAVRELILRQSEDLLCRNLMCERVGDACMCRLSIVLEKLPNLTTLDVSANRLPALPPSVFQL 365

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig11.1293.1 vs. uniprot

BLAST of mRNA_C-linearis_contig11.1293.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17


Match Name	E-value	Identity	Description
D8LMZ4_ECTSI	1.180e-36	87.01	Hypothetical leucine rich repeat protein n=2 Tax=E...	[more]
A0A1V9ZV51_9STRA	3.470e-16	50.67	Uncharacterized protein n=1 Tax=Thraustotheca clav...	[more]
A0A836CFY3_9STRA	3.870e-16	53.95	Leucine rich repeat protein n=1 Tax=Tribonema minu...	[more]
T0QH27_SAPDV	7.550e-16	52.00	Uncharacterized protein n=1 Tax=Saprolegnia diclin...	[more]
A0A485L6B7_9STRA	1.060e-14	50.00	Aste57867_16664 protein n=1 Tax=Aphanomyces stella...	[more]
F0WI42_9STRA	1.410e-14	47.30	Uncharacterized protein AlNc14C107G6249 n=1 Tax=Al...	[more]
A0A1V9Z9Y8_9STRA	1.910e-14	50.67	Uncharacterized protein n=1 Tax=Achlya hypogyna Ta...	[more]
A0A024GQG6_9STRA	3.730e-14	45.95	Uncharacterized protein n=1 Tax=Albugo candida Tax...	[more]
A0A067CF62_SAPPC	3.870e-14	52.00	Uncharacterized protein n=1 Tax=Saprolegnia parasi...	[more]
A0A6G0X207_9STRA	2.940e-13	48.00	Uncharacterized protein n=1 Tax=Aphanomyces euteic...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003591	Leucine-rich repeat, typical subtype	SMART	SM00369	LRR_typ_2	coord: 96..117 e-value: 210.0 score: 2.5 coord: 118..141 e-value: 0.31 score: 20.1 coord: 72..95 e-value: 7.8 score: 14.1
None	No IPR available	SMART	SM00364	LRR_bac_2	coord: 72..91 e-value: 85.0 score: 6.6 coord: 95..114 e-value: 25.0 score: 10.7 coord: 118..137 e-value: 45.0 score: 8.8
None	No IPR available	PANTHER	PTHR16083	LEUCINE RICH REPEAT CONTAINING PROTEIN	coord: 58..149
None	No IPR available	SUPERFAMILY	52058	L domain-like	coord: 49..151
IPR001611	Leucine-rich repeat	PFAM	PF13855	LRR_8	coord: 73..131 e-value: 4.1E-11 score: 42.5
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 74..95 score: 6.095
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 120..141 score: 5.694
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 97..118 score: 7.25
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10		coord: 18..165 e-value: 7.3E-22 score: 79.5

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig11	contig	C-linearis_contig11:2320695..2322192 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig11.1293.1	mRNA_C-linearis_contig11.1293.1	Chordaria linearis ClinC8C monoicous	mRNA	C-linearis_contig11 2320200..2322225 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-linearis_contig11.1293.1 ID=prot_C-linearis_contig11.1293.1|Name=mRNA_C-linearis_contig11.1293.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=192bp
MPALATNLSNRCLISSFSTMVIARSLKDAARLGSVTTSLLLRRSEDLMCQ
NLMCAKLGGACVCRLAVHLSRLRNLRKLDIAENGLGVLPEPVFELPNLEH
LDVSGNGLKDLSASIGALSSLRTLRVSGNALAALPKETASLPLLTEVHVG
GDSGLDQEGVKDVLRQRPDISVVWDDNGKKAEKNGANTCAR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003591	Leu-rich_rpt_typical-subtyp
IPR001611	Leu-rich_rpt
IPR032675	LRR_dom_sf