prot_C-linearis_contig11.1292.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig11.1292.1
Unique Nameprot_C-linearis_contig11.1292.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length326
Homology
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BLAST of mRNA_C-linearis_contig11.1292.1 vs. uniprot
Match: D8LMZ3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMZ3_ECTSI)

HSP 1 Score: 412 bits (1059), Expect = 1.530e-141
Identity = 234/335 (69.85%), Postives = 264/335 (78.81%), Query Frame = 0 
Query:    1 MYHRALTAGVGVVGKVVGRQTGMFAG-------RACAPV----PAALPLQRWAQ-PHHERHQQQQTRGLSSQASQKSEDG---EGRKLRRTEEEAKKVAEHKAAVQEYKLKMTALRKEIQQETKDRRQAEAVSAALERRRIAKRQAAARAEXXXXXXXXXXXXXXXXXXLKKNYEAGFKESARIFFEREERKKNIHAILLEELEAESKHWISTPEDITAKITDGIWEVPGNNSAGGQISMPDEHLWRFSADVGLYNQEEEPSERNAYLRSRMYSRMKEMHTAETYVRERRTRWDNDTRGLLKEADRLLRKKRPAPPGYMARLESSGAANRWKPIQ 320
            MYHR L AG   VG VV  + G+ AG       R    V     AALP +RWAQ PH++ HQQ    GLSS ASQK  DG   EG K RRTEE+AKKVAEHKAA  EY+L+MTALRKE+Q+E KD+R+A+AV+AALERRRIAKRQAAARAE                  LK+NYEAG++ESAR+FFEREERKKNIHAILLEELEAES+HWI+TPED+TAKITD +WE PGNN+A GQISMPDEHLWRFSADVGLYNQEE+PSER+ YLRSRMYSRM+EMHTA TY RERRTRWDNDTRGLLKEADRLLRKKRP PPGYM+RLESSG A +WKP++
Sbjct:    1 MYHRVLVAGR--VGSVVAGRHGVIAGGPVHHTQRGMTAVVRGSAAALPGKRWAQQPHYQGHQQ--ACGLSSNASQKPADGAEGEGSKARRTEEQAKKVAEHKAAEMEYRLRMTALRKEVQREVKDKREADAVTAALERRRIAKRQAAARAERKRKAAISIALNEERKQQLKENYEAGYRESARVFFEREERKKNIHAILLEELEAESEHWINTPEDVTAKITDDLWEAPGNNTAKGQISMPDEHLWRFSADVGLYNQEEDPSERDPYLRSRMYSRMQEMHTAGTYARERRTRWDNDTRGLLKEADRLLRKKRPGPPGYMSRLESSGKATQWKPME 331
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1292.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LMZ3_ECTSI1.530e-14169.85Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 83..124
NoneNo IPR availableCOILSCoilCoilcoord: 171..191

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig11contigC-linearis_contig11:2314866..2319378 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig11.1292.1mRNA_C-linearis_contig11.1292.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig11 2314822..2320242 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig11.1292.1 ID=prot_C-linearis_contig11.1292.1|Name=mRNA_C-linearis_contig11.1292.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=326bp
MYHRALTAGVGVVGKVVGRQTGMFAGRACAPVPAALPLQRWAQPHHERHQ
QQQTRGLSSQASQKSEDGEGRKLRRTEEEAKKVAEHKAAVQEYKLKMTAL
RKEIQQETKDRRQAEAVSAALERRRIAKRQAAARAERKRKAAISIALNEK
RKEKLKKNYEAGFKESARIFFEREERKKNIHAILLEELEAESKHWISTPE
DITAKITDGIWEVPGNNSAGGQISMPDEHLWRFSADVGLYNQEEEPSERN
AYLRSRMYSRMKEMHTAETYVRERRTRWDNDTRGLLKEADRLLRKKRPAP
PGYMARLESSGAANRWKPIQENDNE*
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