prot_C-linearis_contig11.1285.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig11.1285.1
Unique Nameprot_C-linearis_contig11.1285.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length354
Homology
BLAST of mRNA_C-linearis_contig11.1285.1 vs. uniprot
Match: A0A6H5L1Z4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1Z4_9PHAE)

HSP 1 Score: 177 bits (449), Expect = 5.770e-50
Identity = 95/134 (70.90%), Postives = 116/134 (86.57%), Query Frame = 0
Query:  118 VNLVKKYGSAGLVAYGLLNGVWYTGGITYVMLGPMGLVPA-AGIEGTISASVKQLGKAVGLVWLGSQATKPVRYALAALLAPAADRLIDATQRRLGMSKKVDAVKILVVSIFGSTCLFCLAIIALAGARAAVVS 250
            ++LV + G+AGLV+YG+LNG+WY+GGI +VMLGPMG VPA +GIEGTI+ASVKQLGK +GLVWLGSQATKP+R ALAAL APAADRLI +TQRRLG++KK DAV +LV +IFGST  FCLA++    ARAA+VS
Sbjct:  113 ISLVARLGTAGLVSYGVLNGLWYSGGIAFVMLGPMGAVPAGSGIEGTIAASVKQLGKVIGLVWLGSQATKPLRLALAALTAPAADRLIASTQRRLGLNKK-DAVSLLVAAIFGSTAAFCLAVVTYGVARAAMVS 245          
BLAST of mRNA_C-linearis_contig11.1285.1 vs. uniprot
Match: D7FS32_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS32_ECTSI)

HSP 1 Score: 156 bits (394), Expect = 1.910e-43
Identity = 86/118 (72.88%), Postives = 100/118 (84.75%), Query Frame = 0
Query:  134 LLNGVWYTGGITYVMLGPMGLVPA-AGIEGTISASVKQLGKAVGLVWLGSQATKPVRYALAALLAPAADRLIDATQRRLGMSKKVDAVKILVVSIFGSTCLFCLAIIALAGARAAVVS 250
            +LNG+WY+GGI +VMLGPMG VPA +GIEGTI+ASVKQLGK +GLVWLGSQATKPVR ALA L APAADRLI +TQRRLG+ KK +AV +LV  IFGST  FCLA++A   ARAA+VS
Sbjct:    1 MLNGLWYSGGIAFVMLGPMGAVPAGSGIEGTIAASVKQLGKVIGLVWLGSQATKPVRLALAVLTAPAADRLIASTQRRLGLKKK-NAVSLLVAVIFGSTAAFCLAVLAYGVARAAMVS 117          
BLAST of mRNA_C-linearis_contig11.1285.1 vs. uniprot
Match: A0A7R9TLL4_9VIRI (Hypothetical protein n=2 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TLL4_9VIRI)

HSP 1 Score: 68.6 bits (166), Expect = 1.750e-10
Identity = 42/104 (40.38%), Postives = 64/104 (61.54%), Query Frame = 0
Query:  115 PARVNLV---KKYGSAGLVAYGLLNGVWYTGGITYVMLGPMGLVPAAGIEGTISASVKQLGKAVGLVWLGSQATKPVRYALAALLAPAADRLIDATQRRLGMSK 215
            PAR  ++   K+YG AG+++YG+ N  +Y   + + +   M  +PA      I+A  ++L + + +VW+GSQATKP+R   A  LAP ADRL+ AT  RLGM +
Sbjct:   14 PARTTMLDKLKEYGMAGVLSYGVFNTTYYI--VAFCVGARMVDLPAGA---GIAAVCRKLAEVLAVVWVGSQATKPLRAGAALTLAPFADRLLGATASRLGMGR 112          
BLAST of mRNA_C-linearis_contig11.1285.1 vs. uniprot
Match: A0A836C8Q3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8Q3_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 2.620e-8
Identity = 48/130 (36.92%), Postives = 68/130 (52.31%), Query Frame = 0
Query:  118 VNLVKKYGSAGLVAYGLLNGVWYTGGITYVMLGPMGLVPAAGIEGTISASVKQLGKAVGLVWLGSQATKPVRYALAALLAPAADRLIDATQRRLGMSKKVDAVKILVVSIFGSTCLFCLAIIALAGARAA 247
            +N ++ YG AG++AYG LNGV+Y+  I +  L   G    AG    ++A+ K   K   LVW GSQ TK  R   A LLAP A+R + A + RL +  +  A  +L   +  +T     A + L G  AA
Sbjct:   70 MNKLRSYGFAGILAYGALNGVYYS--IAFA-LAWYGTTRGAGAPAGVAAAAKLFFKVFALVWAGSQVTKVFRLGGALLLAPVAERALCAARARLRLPSQRAAFALLATLLVSATLALFGAQVVLTGLLAA 196          
BLAST of mRNA_C-linearis_contig11.1285.1 vs. uniprot
Match: I0YLC7_COCSC (Uncharacterized protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YLC7_COCSC)

HSP 1 Score: 62.4 bits (150), Expect = 2.790e-8
Identity = 43/111 (38.74%), Postives = 61/111 (54.95%), Query Frame = 0
Query:  121 VKKYGSAGLVAYGLLNGVWYTGGITYVMLGPMGLVPAAGIEGTISASVKQLGKAVGLVWLGSQATKPVRYALAALLAPAADRLIDATQRRLGMSKKVDAVKILVVSIFGST 231
            +K YG AG+VAYGLLN V+YT   TY+    +G     G+    + + ++L + +G+ W GSQ TK  R A A LLAP  D+ + A QR L +  +  A   +V    G T
Sbjct:   23 LKVYGLAGVVAYGLLNTVYYTAMFTYMWT--VGFKVPRGLG--YAEAARKLVEVLGITWAGSQLTKAARAAGALLLAPVVDKGLGAFQRALHLKSRRTAFLYIVALCLGLT 129          
BLAST of mRNA_C-linearis_contig11.1285.1 vs. uniprot
Match: A0A7S3C0T1_9VIRI (Hypothetical protein (Fragment) n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3C0T1_9VIRI)

HSP 1 Score: 62.8 bits (151), Expect = 4.770e-8
Identity = 43/126 (34.13%), Postives = 69/126 (54.76%), Query Frame = 0
Query:  105 TSESSDAREKPARVNLVKKYGSAGLVAYGLLNGVWYTGGITYVMLGPMGLVPAAGIEGTISASVKQLGKAVGLVWLGSQATKPVRYALAALLAPAADRLIDATQRRLGMSKKVDAVKILVVSIFGS 230
            +S+  DA EK A   L + YG AG+ +YGL N ++Y    +   +   G V   G++      ++++ + + +VW+GSQATKP+R   A +LAP  DR +   Q  L +  K+ A  +L  S FG+
Sbjct:   57 SSDIKDAEEKGAVAQL-RAYGLAGVASYGLWNTIYYLLAFSAAWMAMSGSVQGQGLQ----VVLRKMPQVLAVVWVGSQATKPLRAGGALMLAPLMDRGLARAQAALRLPSKLAAFWLLTASCFGA 177          
BLAST of mRNA_C-linearis_contig11.1285.1 vs. uniprot
Match: W7TS87_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TS87_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 1.460e-7
Identity = 49/155 (31.61%), Postives = 76/155 (49.03%), Query Frame = 0
Query:  116 ARVNLVKKYGSAGLVAYGLLNGVWYTGGITYV----------MLGPMGLVPAAGIEGTISASVK-------------QLGKAVGLVWLGSQATKPVRYALAALLAPAADRLIDATQRRLGMSKKVDAVKILVVSIFGSTCLFCLAIIALAGARAA 247
            A +  +++ GSAGL+AYG++N ++YT  IT +          +L P  L   A   GT  A++              +  K V + W GSQ TKP+R   A LLAPA  RL+  T+R+L +  K   + +L+ ++     L    ++  AGA  A
Sbjct:  109 AALAALRETGSAGLLAYGIVNALYYTVAITIIWLCVDGDVEPLLSPSALGATAAAAGTGKAAMSAATSAPSLRLLSTRFLKVVAMAWAGSQVTKPLRVGGAILLAPAVSRLMGYTERKLQLRSKRQTLAVLLAALMVFPTLVFAGLLIKAGAWEA 263          
BLAST of mRNA_C-linearis_contig11.1285.1 vs. uniprot
Match: A0A2V0NR54_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NR54_9CHLO)

HSP 1 Score: 58.2 bits (139), Expect = 3.220e-6
Identity = 35/96 (36.46%), Postives = 55/96 (57.29%), Query Frame = 0
Query:  121 VKKYGSAGLVAYGLLNGVWYTGGITYVMLGPMGLVPAAGIEGTISASVKQLGKAVGLVWLGSQATKPVRYALAALLAPAADRLIDATQRRLGMSKK 216
            +++YG +G++AYGLLN ++Y+    +V +    +    G+ G    + ++  +   L W GSQ TK  R A A  LAP  DRL+D  Q RLG++ K
Sbjct:  103 LQRYGLSGVLAYGLLNTLYYSCMFLFVWVYVAKVPSGLGLPG----AARKFLEVFALTWGGSQVTKVARAAGALALAPVVDRLLDGAQARLGLATK 194          
BLAST of mRNA_C-linearis_contig11.1285.1 vs. uniprot
Match: A0A8J9S7R7_9CHLO (Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9S7R7_9CHLO)

HSP 1 Score: 56.2 bits (134), Expect = 1.680e-5
Identity = 41/113 (36.28%), Postives = 57/113 (50.44%), Query Frame = 0
Query:  121 VKKYGSAGLVAYGLLNGVWYTGGITY----VMLGPMGLVPAAGIEGTISASVKQLGKAVGLVWLGSQATKPVRYALAALLAPAADRLIDATQRRLGMSKKVDAVKILVVSIFG 229
            ++ YG AG+VAYGLLN ++YT   TY    V   P GL          +A+ ++  +  G+ W GSQ TK  R   A LLAP  D+ +   QR L +  +  A    VV+  G
Sbjct:  116 LQAYGLAGIVAYGLLNTLYYTAMFTYMWTVVYKVPRGL--------GFAAAARKFVEVFGITWAGSQLTKAARAGGALLLAPLVDKGLTGLQRTLHLKSRRAAFLYTVVACLG 220          
BLAST of mRNA_C-linearis_contig11.1285.1 vs. uniprot
Match: A0A6P3ZEF1_ZIZJJ (uncharacterized protein LOC107412915 n=2 Tax=Ziziphus jujuba TaxID=326968 RepID=A0A6P3ZEF1_ZIZJJ)

HSP 1 Score: 55.1 bits (131), Expect = 3.700e-5
Identity = 39/109 (35.78%), Postives = 60/109 (55.05%), Query Frame = 0
Query:  121 VKKYGSAGLVAYGLLNGVWYTGGITYVMLGPMGLVPAAGIEGTISASVKQLGKAVGLVWLGSQATKPVRYALAALLAPAADRLIDATQRRLGMSKKVDAVKILVVSIFG 229
            +K+YG+AG+++YGLLN ++Y   +T  +L    + PA G  G ++A V++  K + +VW GSQ TK +R   A  LAP  DR +     R     +  A   +V   FG
Sbjct:  106 LKRYGTAGILSYGLLNTIYY---LTTFLLVWFYVAPAPGKMGYLAA-VERFLKLMAMVWAGSQVTKLIRAGGALALAPFVDRGLSWFTIRFKFESQGQAFTAIVAFCFG 210          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1285.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A6H5L1Z4_9PHAE5.770e-5070.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FS32_ECTSI1.910e-4372.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7R9TLL4_9VIRI1.750e-1040.38Hypothetical protein n=2 Tax=Prasinoderma colonial... [more]
A0A836C8Q3_9STRA2.620e-836.92Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
I0YLC7_COCSC2.790e-838.74Uncharacterized protein n=1 Tax=Coccomyxa subellip... [more]
A0A7S3C0T1_9VIRI4.770e-834.13Hypothetical protein (Fragment) n=1 Tax=Prasinoder... [more]
W7TS87_9STRA1.460e-731.61Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A2V0NR54_9CHLO3.220e-636.46Uncharacterized protein n=1 Tax=Raphidocelis subca... [more]
A0A8J9S7R7_9CHLO1.680e-536.28Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi ... [more]
A0A6P3ZEF1_ZIZJJ3.700e-535.78uncharacterized protein LOC107412915 n=2 Tax=Zizip... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34370FAMILY NOT NAMEDcoord: 90..238
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 129..149
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 219..242
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 243..354
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 150..218
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 23..42
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 43..128
NoneNo IPR availableTMHMMTMhelixcoord: 127..149
NoneNo IPR availableTMHMMTMhelixcoord: 20..42
NoneNo IPR availableTMHMMTMhelixcoord: 222..244

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig11contigC-linearis_contig11:2280947..2283482 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig11.1285.1mRNA_C-linearis_contig11.1285.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig11 2280947..2283482 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig11.1285.1 ID=prot_C-linearis_contig11.1285.1|Name=mRNA_C-linearis_contig11.1285.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=354bp
DCDQAGDKSESSRERRKPMPMQMAMLLVALCSSSTGVLAFQLPAPRTRLG
SQHGSRLASVVFQHRTIEGVRSTIIGRTFLHGIDVGSSGGEEIKEEASSD
AGQKTSESSDAREKPARVNLVKKYGSAGLVAYGLLNGVWYTGGITYVMLG
PMGLVPAAGIEGTISASVKQLGKAVGLVWLGSQATKPVRYALAALLAPAA
DRLIDATQRRLGMSKKVDAVKILVVSIFGSTCLFCLAIIALAGARAAVVS
TAAATASTTAPASSSSATLLLLGFRHRGGVGFGGGVDCGDRGEFPLLPSF
VGARNRASAFDREEGAAFRPPRRVGSRLRRAVQMFHRASNAAAAAVAVEH
LLDL
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