prot_C-linearis_contig11.1272.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig11.1272.1
Unique Nameprot_C-linearis_contig11.1272.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length1668
Homology
BLAST of mRNA_C-linearis_contig11.1272.1 vs. uniprot
Match: A0A6H5JU62_9PHAE (BTB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JU62_9PHAE)

HSP 1 Score: 1016 bits (2628), Expect = 0.000e+0
Identity = 917/1770 (51.81%), Postives = 1067/1770 (60.28%), Query Frame = 0
Query:    4 PMPAVTRPG---SLDYSALAERLAIEMAAAXXXXXXXXXXXXXXXXXTAGGTISRLSVLPSFGDARRGDAKPRGVDSDDPPEPSESQACDDSSPRLVGAENDTDG-----RPLAPTLPLPLQ----PSNETKRLRVGEETVALRARLRERWFRLEAARKAQRQRESAERELMAAEDGSSARSTREQDGEAGSSGARTQGRSCIAEPAGVADDGGSSDGDRESGKGNASSXXXXXXXXXXXXXXXXSSRVTTTSRVPSTAETSCISNELDSTXXXXXXXXXXXXXXXXAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXMASTGPGLASSARQDLSKQDASGRTDVSDEAAD-SGDAAGASLGHVEKKEIDAAPCEGDGDSGRVPALHGECVHAACEAGMAGLLNDFLVRSGGRVADGKDKSRRTPLHLAAEAGSLECVSLLLKQGTRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMANSNQAWKSS---NREGAAPQTMVAMADPASKARGNATGNRRALPSSLYQGPANRGXXXXXXXS-VSVPALSPVHEAAAAGQTETLSLLLQLGVSLEERHSAAGGVGDTPLGRAVRAGQLDCAKLLLQAGAMIGRENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLEGGRSNGKLTAADGRAPVGAREKMMARRRVEPLELALREGQFACAAVLIEGGACITEGALRSVKLE-SAALASREKSTSQGPRVRYAGTSANDSYHGNAWSGKNAKRGAASASASLLPLQTDICQLVSPEISELADSSPPDGGGLEEDPN------DSVE-----------------------------------GSQTQYVGGLLPGLGECDVVLVLDDGSRLPVHSCLLAAFSGTFRDLLLRRNGLNCRGLCCASCDDGTRCSSGKSVGSLAGSSDASSAVADDGVDDRRNRSRDVQPLLAGGRLPSE--EAGGKRTRQASVATSEAAVAXXXXXXTSIAENTVWESPAVVEWKPARGDVLVRFLGAGTMATVVRHMYTGQSPADVHMDGLGRLLVASVALRMPRLMRQVEHLLSVSLSSQKGGDRSAQLKEVARLLRAXXXXXXAHLEHRCTLYLQANGGFPAVMKLRRELRVPALNASDVARGLARLTGSGYLGSGPAHAWSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFDQLVPILLDPPR----CASTLSVGYPERTVLLKAAMAAACPGR--REIPPVPNKMPSQERQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAANPLASNFSAFSHGVGWLLSTGTVADVVLVLPGGP--------CTMVEPGATCSDEVEEEHDAEKESDTKGLGIGDGPHHQGLGAQAAASVVDT-SHGGTAGNDRDTGGTRQTTAASLAKERAAKATVDKTRFLAHSMVLAARSEKFAAMLRFVRRQDDDGLKCADGDAADSADDGTANGCEECRRVMSCGFKRGGVGSPEEATCGGLKNGASYGVDPQLSASNCGK----------------PLHCRRGRPRRRPRRDPMPRELELHSPLLSPRSLGLFLEFLYTGVLDPSLSTGELSELALIADEYLVPDLTRQVEALLMESL-------------AIRNAGEYSCQ-TTCRSNTSSHSRREEDTASVPLDVLQLGVSLGLPDLSAAAARAVLLQLDSVSRSEAFEASGMSKRGLVVAALEAVRS 1667
            P P VT      +LDYS+L +RLAIE AAA                   G   SRLSVLPS G  R G+AKP    S   P  S+ +  +  SP  +G + D        +  +P LP P       +N   R     ET ALRARLR+RWFRLEAARKAQRQRE+AER LM AED ++  S     G  G  G  +     +   +G   D G + G R S                       SS    TS                  XXXXXXXXXXXXXXXX  XXXXXXXX                    +++     A+ A    + + AS R + +   A+ SG+  G             A C   G  G +PA+ GE V+AAC+AGMAGLLND LVRSGGR ADGKDK RRTPLHLAAEAGSLECVSLLLKQGTRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     MANSNQAWKSS   +R+ +AP +MV M+  AS+ARGNATG RRAL S +  G +N         + V VPALSP+HEAAA+GQ ETLSLLLQLGVSLEER +AAG  GDTPLGRAVRAGQ+DCA++LL AGAM+GREN  XXXXXXXXXXXXXXXXXXXXXXXX    PL+GG+SNG+LT ADGRAP G REKMMARRRVEPLELALREGQ ACAA LIEGGA I E  LR+VKL+ S    + +KS +QG +V YAGTS  +S  G  WSG N   G+A   A+ LPLQ DI Q +SPE+ E++DS+PPDGGGLE DP       D V                                    G   +YVGGL P LGECD+ LVL+DGSRLP HSCLLAAFSGTF DL LRR+G   R  C A+   G   S  + V    G+S+ ++A AD    D+R RSRDV  LLAG   P +   A  +  RQ S + SEAAVA      T+  ENT W +P V++W P RG+V VRF GAGTM+ VV+H+YTGQ P+++H DGLGRLLVASV+LRM RL+RQVEHLLS  L+ QKG  RS Q  E ARLLRA        LE RCTLY+QANG FPAVMKLRREL VP+LN  DV RGLARL+ SGYLGSGPA+AWSSS                                FDQLVP+LLD  R    C STLS+G  ER VLL AA+A ACP    R     P+ + + +R+                               + A PL SN SAFSHG+GWLL TGTVADVVLVLP  P         T++E G    +E E+ +   +E+ + G  +G     +  GA +A S VD+ +     G  +D G  R  T  S   E   K  +  +RFLAHSMVLA+RSEKF+AMLRFV+ QD +    AD     S DD      +   R            + EE   G ++ G + G +   +  N GK                P   RR   RRRPRR+  PRE+ELHSP+L+P+SLGLFLEFLYTGVLD SLST ELSELALIADEYLVPDL RQ EALL+E L             A RNAG+YS   TT    T+  S+REEDT S PL++LQLGVSL LPDLSAAAARAVLLQL+ VSRSEAFE S MSKR LV+AALEA+ S
Sbjct:  377 PPPVVTAAAGHVALDYSSLKDRLAIEAAAAAKAAAESSGALGGT---AEGDDFSRLSVLPSVGSGRGGEAKPGSTSSAILPVSSDLRVLEGCSPGSMGTDGDVSRGISALQSQSPKLPSPPSRQAVAANSVTRC-ASAETAALRARLRDRWFRLEAARKAQRQREAAERALMTAEDCATLGSAASVLGWNGGDGNHSSAEEGMRSGSGENHDEGEAKGRRAS-----------------------SSHTAMTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLPMGTNTSSPLNQNECSRGISAIASIPAAEAELIEAAETASCRPETTQVGAELSGEDGGR------------ASC---GGGGGLPAVTGEHVYAACQAGMAGLLNDLLVRSGGRAADGKDKLRRTPLHLAAEAGSLECVSLLLKQGTRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELLMTMANSNQAWKSSAPSSRDNSAPYSMVVMSGQASRARGNATGKRRALQSPMNPGSSNSARANGGKGNGVPVPALSPLHEAAASGQPETLSLLLQLGVSLEERDAAAGVGGDTPLGRAVRAGQIDCARILLDAGAMVGRENARXXXXXXXXXXXXXXXXXXXXXXXXA---PLDGGKSNGRLTGADGRAPTGPREKMMARRRVEPLELALREGQLACAAALIEGGAHINERTLRAVKLQPSGTEVTEDKSVAQGRQVIYAGTSPGESRRGGGWSG-NGGAGSAGTPATTLPLQADILQRLSPEVPEISDSAPPDGGGLEVDPEYDCDMLDGVSVDIRETWRDKDLARREPSAGGSKETAAEGEAATRPGRPVEYVGGLRPTLGECDIDLVLEDGSRLPAHSCLLAAFSGTFCDLFLRRHGRCSRRTCPAA--RGGNYSKRQPV---PGASEVAAAAADGREMDQRTRSRDVHHLLAGHDPPGQGRSATSEHQRQTSPSISEAAVAAAAFAATATVENTAWWAPPVIDWGPGRGEVSVRFWGAGTMSAVVKHVYTGQPPSNMHADGLGRLLVASVSLRMNRLIRQVEHLLSDRLAPQKGKARSLQHAEAARLLRAARVLRATDLEKRCTLYMQANGVFPAVMKLRRELVVPSLNTLDVTRGLARLSNSGYLGSGPAYAWSSSGAVSTSSASATVAAAKLAVDLSLRKRAVD---FDQLVPLLLDTVRFITWCTSTLSIGRQERAVLLTAALADACPQESPRSQNDAPDPLAAPQRRRPIPPNLRGCCDAVRCDGDRWNAD-------RPAVPLVSNVSAFSHGMGWLLRTGTVADVVLVLPEQPSHSDAMPPATVIEDG----EEDEKNYSGNRENLSPGGRVGVQSSER--GAHSADSAVDSPARVSPGGPVKDEGSGRPATD-SRKMEGTTKDQLVNSRFLAHSMVLASRSEKFSAMLRFVQGQDGNSRTYADSVDGSSTDDDIFTDADTPEREHR---------NREEPPWGDVEQGEAAGHNQGEAVDNIGKDGEVSQPPRIDSRRPSPPSDRRCHCRRRPRRNTAPREMELHSPILTPQSLGLFLEFLYTGVLDTSLSTRELSELALIADEYLVPDLIRQAEALLVECLVRRGDVRYSLQVTASRNAGDYSFDSTTFNGTTTVQSKREEDTESAPLELLQLGVSLALPDLSAAAARAVLLQLERVSRSEAFEQSSMSKRELVMAALEAMCS 2069          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1272.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JU62_9PHAE0.000e+051.81BTB domain-containing protein n=2 Tax=Ectocarpus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 148..168
NoneNo IPR availablePFAMPF13637Ank_4coord: 596..652
e-value: 1.1E-6
score: 29.1
NoneNo IPR availablePANTHERPTHR24123ANKYRINcoord: 407..749
coord: 382..536
NoneNo IPR availablePANTHERPTHR24123:SF37coord: 407..749
coord: 382..536
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 509..539
e-value: 1000.0
score: 4.9
coord: 667..696
e-value: 250.0
score: 9.4
coord: 443..472
e-value: 0.31
score: 20.1
coord: 476..505
e-value: 0.2
score: 20.7
coord: 722..751
e-value: 560.0
score: 6.9
coord: 594..623
e-value: 28.0
score: 13.6
coord: 631..660
e-value: 0.12
score: 21.4
coord: 410..441
e-value: 8.0E-4
score: 28.7
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 631..663
score: 10.446
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 594..626
score: 9.591
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 410..442
score: 13.063
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 443..475
score: 9.431
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 476..508
score: 9.538
IPR000210BTB/POZ domainSMARTSM00225BTB_4coord: 864..1070
e-value: 7.3E-8
score: 42.1
coord: 1392..1579
e-value: 1.6E-7
score: 41.0
IPR000210BTB/POZ domainPROSITEPS50097BTBcoord: 864..894
score: 10.489
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 381..473
e-value: 1.1E-12
score: 48.3
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 380..699
score: 48.836
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 372..571
e-value: 6.6E-35
score: 122.8
coord: 585..786
e-value: 5.5E-21
score: 77.0
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 596..747
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 379..541
IPR011333SKP1/BTB/POZ domain superfamilySUPERFAMILY54695POZ domaincoord: 864..1066
IPR011333SKP1/BTB/POZ domain superfamilySUPERFAMILY54695POZ domaincoord: 1398..1578

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig11contigC-linearis_contig11:2110848..2119270 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig11.1272.1mRNA_C-linearis_contig11.1272.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig11 2110418..2119617 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig11.1272.1 ID=prot_C-linearis_contig11.1272.1|Name=mRNA_C-linearis_contig11.1272.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1668bp
MPAPMPAVTRPGSLDYSALAERLAIEMAAAASAAAEAVSSSSGAAGSTAG
GTISRLSVLPSFGDARRGDAKPRGVDSDDPPEPSESQACDDSSPRLVGAE
NDTDGRPLAPTLPLPLQPSNETKRLRVGEETVALRARLRERWFRLEAARK
AQRQRESAERELMAAEDGSSARSTREQDGEAGSSGARTQGRSCIAEPAGV
ADDGGSSDGDRESGKGNASSSSDGTSDQGRPKHRRSSSRVTTTSRVPSTA
ETSCISNELDSTSTSTAQGLGASSPEPRAVSAAGIAAIRRSEAAAAAASV
AAAPATETMASTGPGLASSARQDLSKQDASGRTDVSDEAADSGDAAGASL
GHVEKKEIDAAPCEGDGDSGRVPALHGECVHAACEAGMAGLLNDFLVRSG
GRVADGKDKSRRTPLHLAAEAGSLECVSLLLKQGTRLDPRDKWRETPLHK
AARAGNAGIVKALCTARMKVNVRNRHRETPLLLAVRADALDIVSVLLGFG
ARLDDPDVYGVTPIVQAAMSGQAELLMAMANSNQAWKSSNREGAAPQTMV
AMADPASKARGNATGNRRALPSSLYQGPANRGRGSGRGNSVSVPALSPVH
EAAAAGQTETLSLLLQLGVSLEERHSAAGGVGDTPLGRAVRAGQLDCAKL
LLQAGAMIGRENARGRVEETPLVVAIRAGEASGVELLTQHGAPLEGGRSN
GKLTAADGRAPVGAREKMMARRRVEPLELALREGQFACAAVLIEGGACIT
EGALRSVKLESAALASREKSTSQGPRVRYAGTSANDSYHGNAWSGKNAKR
GAASASASLLPLQTDICQLVSPEISELADSSPPDGGGLEEDPNDSVEGSQ
TQYVGGLLPGLGECDVVLVLDDGSRLPVHSCLLAAFSGTFRDLLLRRNGL
NCRGLCCASCDDGTRCSSGKSVGSLAGSSDASSAVADDGVDDRRNRSRDV
QPLLAGGRLPSEEAGGKRTRQASVATSEAAVAAAALAATSIAENTVWESP
AVVEWKPARGDVLVRFLGAGTMATVVRHMYTGQSPADVHMDGLGRLLVAS
VALRMPRLMRQVEHLLSVSLSSQKGGDRSAQLKEVARLLRAARVLRAAHL
EHRCTLYLQANGGFPAVMKLRRELRVPALNASDVARGLARLTGSGYLGSG
PAHAWSSSGAVSAASGSTAVVAVAAAKRAVDLSLRKRAVDFDQLVPILLD
PPRCASTLSVGYPERTVLLKAAMAAACPGRREIPPVPNKMPSQERQEQMP
PKRRPPVCCGRCSSSSSSSSSSSSSGGQAANPLASNFSAFSHGVGWLLST
GTVADVVLVLPGGPCTMVEPGATCSDEVEEEHDAEKESDTKGLGIGDGPH
HQGLGAQAAASVVDTSHGGTAGNDRDTGGTRQTTAASLAKERAAKATVDK
TRFLAHSMVLAARSEKFAAMLRFVRRQDDDGLKCADGDAADSADDGTANG
CEECRRVMSCGFKRGGVGSPEEATCGGLKNGASYGVDPQLSASNCGKPLH
CRRGRPRRRPRRDPMPRELELHSPLLSPRSLGLFLEFLYTGVLDPSLSTG
ELSELALIADEYLVPDLTRQVEALLMESLAIRNAGEYSCQTTCRSNTSSH
SRREEDTASVPLDVLQLGVSLGLPDLSAAAARAVLLQLDSVSRSEAFEAS
GMSKRGLVVAALEAVRS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR000210BTB/POZ_dom
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf
IPR011333SKP1/BTB/POZ_sf