prot_C-linearis_contig11.1241.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig11.1241.1
Unique Nameprot_C-linearis_contig11.1241.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length999
Homology
BLAST of mRNA_C-linearis_contig11.1241.1 vs. uniprot
Match: D7FPM4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPM4_ECTSI)

HSP 1 Score: 596 bits (1536), Expect = 6.260e-193
Identity = 481/1210 (39.75%), Postives = 562/1210 (46.45%), Query Frame = 0
Query:    1 MLRCRGQPAALRCLDGVLDPTVRWGWRQIGPGATVAAPKNGAGSYAGYQSRARRRRAAAVTNTNSIPDGSSTETVHGTAISADPAPTIPDAPAP---AGGPKAAELRAWQLAMLELARRHGMSQETLNQSKDPNKISKLTAEYIPEVLEAWQKVVDSDSGRNLWFRGAAKFYASLLGGVWSKIANSFLEHLIRMCGDSNSDGGGHYEPSPRPDDLRRRGGWSIHSPKNSVSPTAAXXXXXXXXXXXXXX---------------GGG--------QLDWKRGLEILKEAHNAGVVVNPDLMVMVLSKAPVGNSRKISHLVSDKGSKAFGFLAS-PDILATAAVAHWREGVVTGAARHVDMMFTRRAAWKKKRLTSPGPLVHEWLATVTQGGDPASAEKEGASSPASGGRQRHWPWLLVVVDIYGRAGRWAEAAEAFDSFVSNSSSFGGLDSDSSHGGGG------------------------------------------SSYARLPMPDEVAGGDGIVSVRREL----SALPLEAWASFHPSALLHATTSYLKLGMAEEAAEVLSFLKAGLEAGTPSRAAAPAGSSRTRQATAVGXXXXXXXXXXXXXXXXXXXASSHFTPAG--SSDPAWVEGTVRGFARLGGWDLAPEVLSPEVVGWFSSEAGAA-----GGSDGRLALVFESLEAFLESKIVTKRPAPGQVDGSRVCLELLKAC---------------------------------------------RAR---------------------------------------------------GLLEGD-------------EEALVYAEALRWFPP--------ASGGHVAVSEAGEQRG--TPMIDAATRVRFGNDYRSMLRSRCMDLPQEAVLQAIGRAWATDGQQPEGEREGVSDATMERRRFAAFALYEAGIETSVLSEDGHWTSRSAGTMTLNYREYQMQDGAPLAALNLVLSDMRRKYAYEESVGRHVHQPQADLVMIARVWSNNRALDMAKEILWLLGVCSRRHGAPLGG-LELLGRGETGHLTHPAAAAVATRQQG---------QTETAREXXXXXXXXXXXXXXXXXXXXXSKRGFVFSLPRRALQGWLLREGRARRESRGVEGGG---GRLWTPSWVEDGIDVVPPTLPGFGVAEGNGVGGVSGGGVSKEAPFESTIASREAL 998
            MLRCRGQ  ALR L   L PT RW  ++ G     A       S     S               IPDG     V G+ + A  A T   A A    A G  ++ELRAWQ AM+ELA+RH   Q   + SKDPNK+SK TAE+IP                               GGVW K+AN FL  LIR C            P   P       GW +   + +   T+ XXXXXXXXXXXXXX               G G        +LDW+R LE++KEAH AGV V PDLM +VLSK PVGNSRKIS LVS+KGS+AFG  AS PD+LA AAVAHWREGVVTGAARH+D MF R     K+ + SP  LV EWLA   Q    A+A      +P S   +R WPW LV VDIYGRA RWA AAEAFD+F+      G +   SS  G                                            +   RLP+P+E            +     S LPL+AW SFHPSA+ HA T+YLKLG  EEAAEVLSFLKA + AG  + AA              G                   A S  + +G  + DP W+EGTVRGF R G WD+A EVLS ++V WFS+E G       GG   RL    ESLEAFLE+K+  K+PA GQV GS+ CLELLK                                               R R                                                   G  EGD             ++ALVY EA+RW  P        A GG    +  G+      P I+      F +  RSMLRS C    QEAVLQ + + W   G       E   DAT ERRR A+ ALYEAG+E+  L  D HW S+SAG + L+  +YQM  G PLAALNLVLSDMRRKYAYEE+V RHVH PQ DLVMI  V  +  ALD  K ILWLLG C  R   PL G LELLG  + G   HP     ATR++G         Q E  RE                       RG V SL RR LQGWLLREGRA   SR   GGG   GRLW PSWVEDGIDVVPP LPG   A  +G   V+GG  S E    + + +RE +
Sbjct:    1 MLRCRGQYLALRRLGEALGPTTRWDLKRRGVLLAAAGXXXXXSSGGAALS-------------GGIPDG-----VPGSKVPAAYAATGAFAHADDNKAAGSASSELRAWQAAMIELAQRHSAKQAIGHDSKDPNKVSKHTAEHIP-------------------------------GGVWPKMANHFLAELIRACDGGARGAAAGVGPWASP-------GWDVARIQAATGSTSXXXXXXXXXXXXXXXXXXXXXISQARVSAAGAGAEFPLPDCRLDWRRALEVIKEAHLAGVEVRPDLMALVLSKVPVGNSRKISRLVSNKGSRAFGLQASTPDMLAVAAVAHWREGVVTGAARHLDEMFARIKKLNKEMVASPSSLVQEWLAADRQRIRDAAAAAA-VETPPSHPPERQWPWRLVAVDIYGRANRWAAAAEAFDAFI------GDMGFPSSRNGRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAHVSARIAKPTRLPLPEEFGXXXXXXXXXXKAGEFSSPLPLQAWLSFHPSAIAHAITAYLKLGRVEEAAEVLSFLKASVRAGGATPAA--------------GGLSPGYVGGSEEGGGYGGRAGSDPSLSGPPTVDPGWMEGTVRGFTRAGKWDMALEVLSTDIVAWFSAETGGDRRSGDGGGGARLVAASESLEAFLEAKLXAKKPASGQVAGSKACLELLKVAAGAQRGVSGDGGAAIXXXXXXXXXXXXXXXDRPAASAVAVLAPGSRGREQGWQREETTPSATAATAAAPSPVARETHGSDRVPGKGCDTPEPGGGDARVGKAEGDGSGSSEPVVDRHRQDALVYTEAIRWLLPGGRLAPDRADGGTTPEAAGGDIPAHLLPAIEL-----FSDGCRSMLRSGCRSASQEAVLQTMCKVWGGAGGTAVAA-EDAGDATKERRRSASLALYEAGVESKALPADAHWASQSAGVLNLDCVDYQMHHGMPLAALNLVLSDMRRKYAYEETVERHVHPPQGDLVMITSVKGSWPALDNLKGILWLLGSC--RFDGPLDGDLELLG--QPGERRHPPTDNAATRERGDGNQGGRRRQLELLREAQESMRSPG--------------RGLVVSLSRRTLQGWLLREGRA--WSRANVGGGXXXGRLWKPSWVEDGIDVVPPVLPGLLTARDDGTDVVAGGVGSGEISGSAQVDAREGM 1107          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1241.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FPM4_ECTSI6.260e-19339.75Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 882..906

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig11contigC-linearis_contig11:1499758..1507425 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig11.1241.1mRNA_C-linearis_contig11.1241.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig11 1499487..1507432 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig11.1241.1 ID=prot_C-linearis_contig11.1241.1|Name=mRNA_C-linearis_contig11.1241.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=999bp
MLRCRGQPAALRCLDGVLDPTVRWGWRQIGPGATVAAPKNGAGSYAGYQS
RARRRRAAAVTNTNSIPDGSSTETVHGTAISADPAPTIPDAPAPAGGPKA
AELRAWQLAMLELARRHGMSQETLNQSKDPNKISKLTAEYIPEVLEAWQK
VVDSDSGRNLWFRGAAKFYASLLGGVWSKIANSFLEHLIRMCGDSNSDGG
GHYEPSPRPDDLRRRGGWSIHSPKNSVSPTAAAATAAAAAIAAGGEGGGQ
LDWKRGLEILKEAHNAGVVVNPDLMVMVLSKAPVGNSRKISHLVSDKGSK
AFGFLASPDILATAAVAHWREGVVTGAARHVDMMFTRRAAWKKKRLTSPG
PLVHEWLATVTQGGDPASAEKEGASSPASGGRQRHWPWLLVVVDIYGRAG
RWAEAAEAFDSFVSNSSSFGGLDSDSSHGGGGSSYARLPMPDEVAGGDGI
VSVRRELSALPLEAWASFHPSALLHATTSYLKLGMAEEAAEVLSFLKAGL
EAGTPSRAAAPAGSSRTRQATAVGGGGSRRVEGGDEERGGGMAASSHFTP
AGSSDPAWVEGTVRGFARLGGWDLAPEVLSPEVVGWFSSEAGAAGGSDGR
LALVFESLEAFLESKIVTKRPAPGQVDGSRVCLELLKACRARGLLEGDEE
ALVYAEALRWFPPASGGHVAVSEAGEQRGTPMIDAATRVRFGNDYRSMLR
SRCMDLPQEAVLQAIGRAWATDGQQPEGEREGVSDATMERRRFAAFALYE
AGIETSVLSEDGHWTSRSAGTMTLNYREYQMQDGAPLAALNLVLSDMRRK
YAYEESVGRHVHQPQADLVMIARVWSNNRALDMAKEILWLLGVCSRRHGA
PLGGLELLGRGETGHLTHPAAAAVATRQQGQTETAREQEEALLRAVQQQQ
QQQQRRAASKRGFVFSLPRRALQGWLLREGRARRESRGVEGGGGRLWTPS
WVEDGIDVVPPTLPGFGVAEGNGVGGVSGGGVSKEAPFESTIASREAL*
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