prot_C-linearis_contig11.1230.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig11.1230.1
Unique Nameprot_C-linearis_contig11.1230.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length525
Homology
BLAST of mRNA_C-linearis_contig11.1230.1 vs. uniprot
Match: D7FRT1_ECTSI (Long-chain acyl-CoA synthetase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT1_ECTSI)

HSP 1 Score: 360 bits (924), Expect = 1.450e-106
Identity = 184/397 (46.35%), Postives = 249/397 (62.72%), Query Frame = 0
Query:  129 TIRHLATWIYAEQMGCDWVTPD-WGKRFVGKGNGTAVMYCHRTATNLEL-----DLSKPLKELQTVRRCSVIDWLSYFQFGMPSVQVPEGATFKHIEVCMTKSSEAISSALSGLQSRGVSEMPWDRLVFTFHPTYASQ-FLLNTGSWDARKREIVRRVLEEARTNFHRHPRPWYDENPKCAFGQDRLDFAVHVRLGDRREWQDGSVEYFELLELIMSTISAEVVGRGLQTPLFHVFSETLVPCPSGEEGLFDEFPTWPLGVDQIPECLAAPTPRDCLEKRAGSFCSPTRDGVFNVVGKNIVLHVGPDVQNALSCMIQADGVLMGCSTFGQVAGLFT-EGIKMFSMQCGGASTPDQYKSIPPLAVSERGRLWVPIAGSWRDPVMASPALFGGALDHLL 517
            T+RHLA  I+AE++GCDW+TP  WG    G G+G +V YCH  AT  E      + +K   E+  V RCSV++W  YF     SV++P   TF+ +E   +++ + +  AL    + G   + WDRL       +AS  FL + GSWD  KRE+VR+VL + R NFH+ PRPWY++ P+C + +  L+FA+HVR+GDRRE +  + EYF LLE  M+T++  VV R    P+FHVFSE L PCP  E   F EFP WP+  DQ+  C     PR+  E+   +    +R   F V G+ ++LH+G +   ALSCM+ ADG+LMGCSTFGQ+AG+   +GI  FS +CGG   P Q K IPPLAV+ERGR+WVPIAGSWRDPV+ +  +F   LD LL
Sbjct:    2 TMRHLAAKIFAEEVGCDWLTPSQWGMPVAGDGSGASV-YCHSAATYDEQRRGFGNATKDEAEIM-VHRCSVVNWPEYFNLNASSVELPANCTFRVVEADTSRNHD-LEMALKETDANGFDNLGWDRLKIVLRQPHASSNFLASLGSWDGWKREVVRKVLRQFRENFHQSPRPWYNDEPECGYEESELNFALHVRMGDRRELEGVTPEYFSLLEGFMATVTQAVVEREQAAPMFHVFSEALYPCPFPENATFTEFPFWPVERDQVSVC-----PRNAAEQDGPA----SRPDTFRVEGRPVLLHLGRNAAEALSCMVHADGLLMGCSTFGQLAGVLNGDGISFFSTECGGHGAPLQSKMIPPLAVAERGRMWVPIAGSWRDPVLRAKHVFSAVLDELL 386          
BLAST of mRNA_C-linearis_contig11.1230.1 vs. uniprot
Match: A0A6H5JW68_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW68_9PHAE)

HSP 1 Score: 301 bits (770), Expect = 1.400e-95
Identity = 140/277 (50.54%), Postives = 190/277 (68.59%), Query Frame = 0
Query:  242 SEMPWDRLVFTFHPTYASQFLLNTGSWDARKREIVRRVLEEARTNFHRHPRPWYDENPKCAFGQDRLDFAVHVRLGDRREWQDGSVEYFELLELIMSTISAEVVGRGLQTPLFHVFSETLVPCPSGEEGLFDEFPTWPLGVDQIPECLAAPTPRDCLEKRAGS-FCSPTRDGVFNVVGKNIVLHVGPDVQNALSCMIQADGVLMGCSTFGQVAGLFTEGIKMFSMQCGGASTPDQYKSIPPLAVSERGRLWVPIAGSWRDPVMASPALFGGALDHLL 517
            S   W++ +   +   A ++    GSW+ARKRE VR VL   + +FH  PRPW +  P+CAF Q +LD A+HVRLGDR++  +    YF+ LE  M T+++  + RG   P+FH+FSET   CPS E G F+EFP WP+ +DQ+  C+ A TP +C EK AG+  C+PTR G+F V G+ + LHVG DVQN LSCM  A+GVLMGCSTFGQVAG+ ++GI+ FS +C G  T  QYK IPP+A++ RG +WVP++GSW DPV+AS ++ G +LD LL
Sbjct:   11 SNPAWNQWLLMMNLMTAPRYFSAVGSWNARKREAVRTVLHTFKQSFHTFPRPWNNIQPECAFSQSKLDIAIHVRLGDRKDSLNDD-SYFDYLEDFMETVASAAIARGQDHPVFHIFSETHSRCPSAENGAFEEFPKWPVEMDQVSTCMEATTPEECPEKDAGAPSCNPTRSGIFAVDGREMNLHVGLDVQNDLSCMANANGVLMGCSTFGQVAGVLSKGIRFFSTECAGWRTTIQYKLIPPMAIAGRGHMWVPVSGSWHDPVIASESILGASLDLLL 286          
BLAST of mRNA_C-linearis_contig11.1230.1 vs. uniprot
Match: D7G5J8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5J8_ECTSI)

HSP 1 Score: 284 bits (726), Expect = 3.650e-90
Identity = 131/205 (63.90%), Postives = 160/205 (78.05%), Query Frame = 0
Query:  316 LGDRREWQDGSVEYFELLELIMSTISAEVVGRGLQTPLFHVFSETLVPCPSGEEGLFDEFPTWPLGVDQIPECLAAPTPRDCLEKRAGSFCSPTRDGVFNVVGKNIVLHVGPDVQNALSCMIQADGVLMGCSTFGQVAGLFTEGIKMFSMQCGGASTPDQYKSIPPLAVSERGRLWVPIAGSWRDPVMASPALFGGALDHLLADR 520
            +GDRR + DGS++YF  +ELIM T++ E   RGL  PLFHVFSETL PCPS   GLFDEFP WP+ +D+I ECLAA TP DC EK+AG+FC+P R G+F +  K+IVLHVG DVQN +SCMIQADGVLMGCSTFGQ+AGL T GI +FS +C G +TP QY+SIPPLA++E+G LWVPI GSW DPV+ S ++F  ALD LL  +
Sbjct:    1 MGDRRAFYDGSLQYFHNVELIMETVADEFRERGLPEPLFHVFSETLSPCPSTVTGLFDEFPIWPVELDKIEECLAAATPIDCPEKQAGTFCTPKRAGIFRIRDKSIVLHVGSDVQNEMSCMIQADGVLMGCSTFGQIAGLLTRGISLFSTRCSGEATPHQYRSIPPLAIAEKGHLWVPIEGSWHDPVLTSRSIFSAALDTLLVAK 205          
BLAST of mRNA_C-linearis_contig11.1230.1 vs. uniprot
Match: A0A6H5L814_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L814_9PHAE)

HSP 1 Score: 229 bits (584), Expect = 2.410e-68
Identity = 114/232 (49.14%), Postives = 148/232 (63.79%), Query Frame = 0
Query:  295 YDENPKCAFGQDRLDFAVHVRLGDRREWQDGSVEYFELLELIMSTISAEVVGRGLQTPLFHVFSETLVPCPSGEEGLFDEFPTWPLGVDQIPE--------CLAAPTPRDCLEKRAGSFCSPTRDGVFNVVGKNIVLHVGPDVQNALSCMIQADGVLMGCSTFGQVAGLFT-EGIKMFSMQCGGASTPDQYKSIPPLAVSERGRLWVPIAGSWRDPVMASPALFGGALDHLL 517
            Y++ P C + + +L+FA+HVR+GDRRE +  + EYF LLE  M+T++  VV R    P+FHVFSE L PCPS E   F EFP WP+  DQ+           L+      CL   A      +R G F V G+ ++LH+G +   ALSCM+ ADG+LMGCSTFGQ+AG+   + I  FS +CGG   P Q K IPPLAV+ERGR+WVPIAGSWRDPV+ +  +F  ALD LL
Sbjct:   14 YNDEPGCGYEESQLNFALHVRMGDRRELEGVTPEYFSLLEDFMATVTQAVVEREQAAPMFHVFSEALYPCPSPENATFTEFPLWPVERDQVDLNVSLHRLFSLSNEKVSVCLRNAAEQGAPASRKGTFRVEGRPVLLHLGRNAAEALSCMVHADGLLMGCSTFGQLAGVLNGDRISFFSTECGGHGAPLQSKMIPPLAVAERGRMWVPIAGSWRDPVLRAKHIFSAALDALL 245          
BLAST of mRNA_C-linearis_contig11.1230.1 vs. uniprot
Match: D7G5J9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5J9_ECTSI)

HSP 1 Score: 226 bits (577), Expect = 4.800e-67
Identity = 107/191 (56.02%), Postives = 131/191 (68.59%), Query Frame = 0
Query:   28 RWALLLGTLLLRS--------SPSAGQPGGMEPSEACVDFATGSYYRGSTWTHDDCVEVWEHFRRSVPSGLQERLPDVDLWGHAGVELRQAGSPCLAAAKPTSDGAGSSTIRHLATWIYAEQMGCDWVTPDWGKRFVGKGNGTAVMYCHRTATNLELDLSKPLKELQTVRRCSVIDWLSYFQFGMPSVQVP 210
            RW LL G LL+ +        +P AG   G+EP++AC DFA G Y  GS WT +DC+ VW  F  +V      R+PD DLW     ELR+AGSPCL  + P  DGAGS+TIRHLATWI++ +MGCDWVTPDWGK+FVG  +GTAVMYCHR  T  E+D SK  +EL+ +RRC +IDWLSYFQF +PSV  P
Sbjct:   68 RWTLLPGLLLVLTPFFEESGLAPVAGALSGVEPADACADFAPGQY-TGSGWTPEDCLHVWNDFNDTVWEQFHPRMPDADLWIDTAEELRRAGSPCLVGSIPNGDGAGSTTIRHLATWIFSREMGCDWVTPDWGKKFVGGRSGTAVMYCHRAGTAAEMDPSKTKEELKAMRRCVIIDWLSYFQFDIPSVPSP 257          
BLAST of mRNA_C-linearis_contig11.1230.1 vs. uniprot
Match: A0A6H5JXM8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXM8_9PHAE)

HSP 1 Score: 185 bits (470), Expect = 2.310e-52
Identity = 89/179 (49.72%), Postives = 119/179 (66.48%), Query Frame = 0
Query:  337 MSTISAEVVGRGLQTPLFHVFSETLVPCPSGEEGLFDEFPTWPLGVDQIPECLAAPTPRDCLEKRAGS-FCSPTRDGVFNVVGKNIVLHVGPDVQNALSCMIQADGVLMGCSTFGQVAGLFTEGIKMFSMQCGGASTPDQYKSIPPLAVSERGRLWVPIAGSWRDPVMASPALFGGALD 514
            M  I+ EV G G +TPLFH+FSET +PCPS E+G+F EFP W +  D+I EC +A  P DC EK+AG  FC P   G+F V G+ I+ +VG +V  +L  MI AD V+MGCS FGQ+AG+ ++GIK+FS  C G  T +Q K  P  A++E G LWVP+ GSW DP + +  +F  A +
Sbjct:    1 MKVIAKEVHGLGQRTPLFHIFSETELPCPSLEDGVFPEFPEWAVAPDEIRECHSARPPDDCPEKQAGGDFCYPHHTGIFRVPGEPIIFNVGGNVVQSLMSMISADAVVMGCSAFGQLAGILSKGIKLFSTGCEGNMTWEQNKMAPLFAIAELGELWVPLEGSWADPTLTNVGIFRKAFE 179          
BLAST of mRNA_C-linearis_contig11.1230.1 vs. uniprot
Match: A0A6H5JJ94_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ94_9PHAE)

HSP 1 Score: 132 bits (332), Expect = 3.430e-33
Identity = 66/139 (47.48%), Postives = 85/139 (61.15%), Query Frame = 0
Query:  382 VDQIPECLAAPTPRDCLEKRAGSFCSPTRDGVFNVVGKNIVLHVGPDVQNALSCMIQADGVLMGCSTFGQVAGLFTEGIKMFSMQCGGASTPDQYKSIPPLAVSERGRLWVPIAGSWRDPVMASPALFGGALDHLLADR 520
             DQI ECLAA TP+DC EK+AG+FC+P R G+F +  K+IVLH+G DVQN +SC+I+ADGVLM                                +SIPPL ++E+G LWVPI GSW DPV +S ++F  ALD LL  +
Sbjct:   19 TDQIEECLAATTPQDCPEKQAGTFCTPKRAGIFRIRYKSIVLHMGSDVQNEMSCIIEADGVLM--------------------------------RSIPPLTIAEKGHLWVPIEGSWHDPVWSSRSIFSAALDTLLVAK 125          
BLAST of mRNA_C-linearis_contig11.1230.1 vs. uniprot
Match: A0A6H5L089_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L089_9PHAE)

HSP 1 Score: 90.9 bits (224), Expect = 1.360e-15
Identity = 50/115 (43.48%), Postives = 65/115 (56.52%), Query Frame = 0
Query:  111 GSPCLAAAKPTSDGAGSSTIRHLATWIYAEQMGCDWVTPD-WGKRFVGKGNGTAVMYCHRTATNLEL-----DLSKPLKELQTVRRCSVIDWLSYFQFGMPSVQVPEGATFKHIE 219
            GSPCL  A   +DG GS T+RHLA  I+AE++GCDW+TP  WG    G G+G +V YCH  AT  E      + +K   E   V RCSV++W  YF     SV+ P     + +E
Sbjct:   16 GSPCLVDAVVKADGVGSMTMRHLAAKIFAEEVGCDWLTPSQWGMPAAGDGSGASV-YCHSAATYEEQRRGFGNATKAEAE-SMVHRCSVVNWPEYFNLNASSVEPPANCALRVVE 128          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1230.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7FRT1_ECTSI1.450e-10646.35Long-chain acyl-CoA synthetase n=1 Tax=Ectocarpus ... [more]
A0A6H5JW68_9PHAE1.400e-9550.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G5J8_ECTSI3.650e-9063.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L814_9PHAE2.410e-6849.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G5J9_ECTSI4.800e-6756.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JXM8_9PHAE2.310e-5249.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJ94_9PHAE3.430e-3347.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L089_9PHAE1.360e-1543.48Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..27
score: 5.0
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..45
score: 0.567

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig11contigC-linearis_contig11:1322316..1332059 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig11.1230.1mRNA_C-linearis_contig11.1230.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig11 1321787..1332261 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig11.1230.1 ID=prot_C-linearis_contig11.1230.1|Name=mRNA_C-linearis_contig11.1230.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=525bp
MRLSCLPPGRPACCSRTNTMATSGAACRWALLLGTLLLRSSPSAGQPGGM
EPSEACVDFATGSYYRGSTWTHDDCVEVWEHFRRSVPSGLQERLPDVDLW
GHAGVELRQAGSPCLAAAKPTSDGAGSSTIRHLATWIYAEQMGCDWVTPD
WGKRFVGKGNGTAVMYCHRTATNLELDLSKPLKELQTVRRCSVIDWLSYF
QFGMPSVQVPEGATFKHIEVCMTKSSEAISSALSGLQSRGVSEMPWDRLV
FTFHPTYASQFLLNTGSWDARKREIVRRVLEEARTNFHRHPRPWYDENPK
CAFGQDRLDFAVHVRLGDRREWQDGSVEYFELLELIMSTISAEVVGRGLQ
TPLFHVFSETLVPCPSGEEGLFDEFPTWPLGVDQIPECLAAPTPRDCLEK
RAGSFCSPTRDGVFNVVGKNIVLHVGPDVQNALSCMIQADGVLMGCSTFG
QVAGLFTEGIKMFSMQCGGASTPDQYKSIPPLAVSERGRLWVPIAGSWRD
PVMASPALFGGALDHLLADRGLAV*
back to top