prot_C-linearis_contig11.1209.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-linearis_contig11.1209.1
Unique Name	prot_C-linearis_contig11.1209.1
Type	polypeptide
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length	269

Homology

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BLAST of mRNA_C-linearis_contig11.1209.1 vs. uniprot
Match: D8LS36_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS36_ECTSI)

HSP 1 Score: 129 bits (324), Expect = 7.090e-31
Identity = 77/148 (52.03%), Postives = 95/148 (64.19%), Query Frame = 0

Query:   20 KALLALLQKGGVVSVQDNVGKTPLHLACCGQRKGIEAVVDTLLRWGADETALDNAGDSPEDLLGKVND--GRGTCSQEVIERVRLLLARAPADRAWRRRGWLAVLRARASRAXXXXXXXXXXAEDSDDAGDGAGESQQVGREDFVGVG 165
            KA+  LL  G  ++ QD  G TPLH+AC  Q KG+EA VD LLRWGADETAL+NAG +P  LL + ++   R TCS+  I RVR+LLARAPADRAWRRR WL +LR+ A  A           E S+DAGD     +Q G+E  + VG
Sbjct:  320 KAMHTLLWHGASLTAQDTEGNTPLHVACYRQHKGLEAPVDLLLRWGADETALNNAGKTPAGLLDEHDNENDRTTCSEAEINRVRMLLARAPADRAWRRRCWLVMLRSFARTAKATTDETGDAHEGSNDAGDKEWREEQRGKEGELVVG 467

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BLAST of mRNA_C-linearis_contig11.1209.1 vs. uniprot
Match: D8LNI8_ECTSI (EsV-1-8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNI8_ECTSI)

HSP 1 Score: 113 bits (283), Expect = 6.800e-27
Identity = 63/110 (57.27%), Postives = 74/110 (67.27%), Query Frame = 0

Query:   24 ALLQKGGVVSVQDNVGKTPLHLACCGQRKGIEAVVDTLLRWGADETALDNAGDSPEDLLG----KVNDGRGTCSQEVIERVRLLLARAPADRAWRRRGWLAVLRARASRA 129
            AL Q G  V V+ N G TPLH  C  + +G+EA VD LLRWGADET L+  G SP D LG    KV  G     Q+ I+R RLLL+RAPADRAWRRRGWL +LR+R S+A
Sbjct:    3 ALFQHGAQVGVRGNQGYTPLHETCWERHEGLEAAVDMLLRWGADETTLNYGGASPADFLGGRYGKVI-GHNPAPQDEIDRTRLLLSRAPADRAWRRRGWLVMLRSRDSKA 111

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BLAST of mRNA_C-linearis_contig11.1209.1 vs. uniprot
Match: A0A6H5JWW4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWW4_9PHAE)

HSP 1 Score: 118 bits (295), Expect = 2.340e-26
Identity = 71/131 (54.20%), Postives = 85/131 (64.89%), Query Frame = 0

Query:   20 KALLALLQKGGVVSVQDNVGKTPLHLACCGQRKGIEAVVDTLLRWGADETALDNAGDSPEDLLGKVND--GRGTCSQEVIERVRLLLARAPADRAWRRRGWLAVLRARASRAXXXXXXXXXXAEDSDDAGD 148
            KA+  LL  G  ++ QD  G TPLHLAC  Q  G+EA VD LLRWGADETAL+N G +P DLL + ++   R TCS+  IERVRLLLARAPAD+A RRR WL +LR+ A              E S+DAGD
Sbjct:  534 KAMNTLLGHGASLTAQDVDGNTPLHLACYRQDSGLEAPVDLLLRWGADETALNNDGKTPADLLDEHDNENDRTTCSEAEIERVRLLLARAPADQARRRRCWLVMLRSFARTTRATTDETGDAHEGSNDAGD 664

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BLAST of mRNA_C-linearis_contig11.1209.1 vs. uniprot
Match: A0A6H5J7H5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7H5_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 3.480e-25
Identity = 81/175 (46.29%), Postives = 106/175 (60.57%), Query Frame = 0

Query:   32 VSVQDNVGKTPLHLACCGQRKGIEAVVDTLLRWGADETALDNAGDSPEDLLGKVNDGRGT-CSQEVIERVRLLLARAPADRAWRRRGWLAVLRARASRAXXXXXXXXXXAEDSDDAGDG-AGESQQVGREDFVGVGGDVGGQASSGASEVGTEVLDGVGNKVFSGVVVRLVGLRP 204
            ++VQD  G TPLH AC  Q KG+EA V  LLR GADETA+++A ++P DLLG ++D  G   S+  IERVRLLLARAP +RAW  R WL +LR+ A              EDS+DAGD  +G+ + V RE+    G  V  + + GA EVG E   G G   ++ +V  +VGL P
Sbjct:  102 LTVQDTDGDTPLHRACYWQHKGLEATVGLLLRSGADETAVNSADETPADLLGYLDDDDGKRYSEAEIERVRLLLARAPTNRAWLGRCWLVMLRSCAKTGRASTDETVGADEDSNDAGDRKSGKFKGVRRENGESAGSWVRSRMN-GAGEVGVE--GGAGG--WASIVASVVGLEP 271

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BLAST of mRNA_C-linearis_contig11.1209.1 vs. uniprot
Match: D8LRZ8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRZ8_ECTSI)

HSP 1 Score: 110 bits (276), Expect = 2.940e-24
Identity = 79/168 (47.02%), Postives = 98/168 (58.33%), Query Frame = 0

Query:   39 GKTPLHLACCGQRKGIEAVVDTLLRWGADETALDNAGDSPEDLLGKVNDGRGT-CSQEVIERVRLLLARAPADRAWRRRGWLAVLRARASRAXXXXXXXXXXAEDSDDAGDGA-GESQQVGREDFVGVGGDVGGQASSGASEVGTEVLDGVGNKVFSGVVVRLVGLRP 204
            G TPLH AC  Q  G+EA VD LL+WGADETA+ N G++P D L + N+  GT CS   I RVRLLLARAPA+RAWRRR WL +LR+ A  A           E S+D GD   G+ +   RE+    GG V  + + GA EVG E     G    + +V  +VGL P
Sbjct:  280 GTTPLHRACYRQDIGVEATVDLLLQWGADETAVHNDGNTPADWLVENNNENGTTCSTAEIGRVRLLLARAPANRAWRRRCWLVMLRSCAKTARATTDKTGDADEGSNDVGDRKDGKCKGARRENGESAGGGVRSRMN-GAGEVGVEG----GASGLASIVASVVGLGP 442

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BLAST of mRNA_C-linearis_contig11.1209.1 vs. uniprot
Match: A0A6H5JRY1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRY1_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 5.870e-23
Identity = 57/93 (61.29%), Postives = 69/93 (74.19%), Query Frame = 0

Query:   39 GKTPLHLACCGQRKGIEAVVDTLLRWGADETALDNAGDSPEDLLGKVND--GRGTCSQEVIERVRLLLARAPADRAWRRRGWLAVLRARASRA 129
            G TPLH AC  Q +G+EA VD LLRWGADETALDN   +P DLL + ++   R TCS+  IE+VRLL+ARAPA+RAWRRR WL +LR+ A  A
Sbjct:  257 GGTPLHWACYWQVRGVEATVDLLLRWGADETALDNDSKTPADLLDEDDNENDRTTCSEAEIEQVRLLMARAPANRAWRRRCWLVMLRSYAKTA 349

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BLAST of mRNA_C-linearis_contig11.1209.1 vs. uniprot
Match: D8LE08_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE08_ECTSI)

HSP 1 Score: 103 bits (257), Expect = 1.150e-21
Identity = 61/133 (45.86%), Postives = 75/133 (56.39%), Query Frame = 0

Query:    6 GDTPLCIPVVEGSPKALLALLQKGGVVSVQDNVGKTPLHLACCGQRKGI-EAVVDTLLRWGADETALDNAGDSPEDLLGK---------VNDGRGTCSQEVIERVRLLLARAPADRAWRRRGWLAVLRARASR 128
            G  PL    V G  + ++ALL++ G    QDN G++ LH AC G   G     VD LLRWGA ETALD  G++P D L +         V        Q  ++R  +LLARAPADRAWRRR WL +LRARA R
Sbjct:  272 GSIPLHASAVHGHDETMVALLKREGNFDEQDNAGRSALHWACIGCLSGTGRTAVDLLLRWGASETALDTRGETPSDYLRRGAAAVASSNVTPRNSEKMQREMQRALVLLARAPADRAWRRRCWLVMLRARAGR 404

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BLAST of mRNA_C-linearis_contig11.1209.1 vs. uniprot
Match: A0A6H5K1F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1F4_9PHAE)

HSP 1 Score: 103 bits (258), Expect = 1.440e-21
Identity = 62/146 (42.47%), Postives = 89/146 (60.96%), Query Frame = 0

Query:    4 VHGDTPLCIPVVEGSPKALLALLQKGGVVSVQDNVGKTPLHLACCGQRKGIEAVVDTLLRWGADETALDNAGDSPEDLL--------GKVNDGRGTCSQEV-------------IERVRLLLARAPADRAWRRRGWLAVLRARASR 128
            +HG TPL + V++ S +A++ALL++GG V+  +  G + LHL C    +G++ +VD LLRWGA ETA++  G +P D+L         +   G G+ ++ V             I+R R+LLARAPADR WRRR WL +LRARA R
Sbjct:  307 LHGFTPLSVCVMDNSCEAVVALLKRGGNVNDTNCGGLSALHLTCGSLSRGMDRMVDLLLRWGASETAVNKNGLTPSDILKVTTAEYHARDAGGDGSATRCVGGSATRHDSLTKEIQRARVLLARAPADRTWRRRCWLVMLRARAER 452

[Close]

BLAST of mRNA_C-linearis_contig11.1209.1 vs. uniprot
Match: D8LBP9_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBP9_ECTSI)

HSP 1 Score: 101 bits (251), Expect = 1.120e-20
Identity = 59/123 (47.97%), Postives = 75/123 (60.98%), Query Frame = 0

Query:    7 DTPLCIPVVEG-SPKALLALLQKGGVVSVQDNVGKTPLHLACCGQRKGIEAVVDTLLRWGADETALDNAGDSPEDLLGKVNDGRGTCSQEVIERVRLLLARAPADRAWRRRGWLAVLRARASR 128
             TPLC+ +  G S +A+  LL++G  VS    + KT LHLAC     G +A+VD LLRWG  E  LD  G++P  LL  V +G  +     +ER  +LLA APADRAWRRR WL +LRAR  R
Sbjct:  303 STPLCVAIEFGASVQAVHTLLRRGCQVS--GPMDKTMLHLACMTMAPGFDAIVDLLLRWGVSELTLDKGGNTPAALLS-VAEGSSSRKAREVERAHVLLANAPADRAWRRRSWLVMLRARTER 422

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BLAST of mRNA_C-linearis_contig11.1209.1 vs. uniprot
Match: D7FSI6_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSI6_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 2.180e-19
Identity = 55/120 (45.83%), Postives = 75/120 (62.50%), Query Frame = 0

Query:    7 DTPLCIPVVEGSPKALLALLQKGGVVSVQDNVGKTPLHLACCGQRKGIEAVVDTLLRWGADETALDNAGDSPEDLLGKVNDGRGTCSQEVIERVRLLLARAPADRAWRRRGWLAVLRARA 126
            DTPL       S +AL  LL+ G   +  D+ G  PLHLA   Q  G+  VVD LLRWGA ETA++  G++P ++  ++   R   ++E    + +LLARAPADRAWRRRGW+ +LRAR+
Sbjct:  240 DTPLLAAAESMSNEALRVLLRNGADPNKPDDNGSMPLHLAAHEQTPGVMEVVDLLLRWGASETAVNKHGNTPAEVFQRLAIHRPDATEERAGAL-VLLARAPADRAWRRRGWVVMLRARS 358

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig11.1209.1 vs. uniprot

BLAST of mRNA_C-linearis_contig11.1209.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LS36_ECTSI	7.090e-31	52.03	Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo...	[more]
D8LNI8_ECTSI	6.800e-27	57.27	EsV-1-8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ...	[more]
A0A6H5JWW4_9PHAE	2.340e-26	54.20	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5J7H5_9PHAE	3.480e-25	46.29	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LRZ8_ECTSI	2.940e-24	47.02	Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo...	[more]
A0A6H5JRY1_9PHAE	5.870e-23	61.29	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LE08_ECTSI	1.150e-21	45.86	Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ecto...	[more]
A0A6H5K1F4_9PHAE	1.440e-21	42.47	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LBP9_ECTSI	1.120e-20	47.97	Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si...	[more]
D7FSI6_ECTSI	2.180e-19	45.83	Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 1..147 e-value: 1.8E-13 score: 52.3
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 3..82
IPR002110	Ankyrin repeat	PFAM	PF00023	Ank	coord: 39..73 e-value: 2.8E-4 score: 21.2
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 38..73 score: 10.526
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..228
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 251..268
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 229..250
None	No IPR available	TMHMM	TMhelix		coord: 228..250
IPR020683	Ankyrin repeat-containing domain	PROSITE	PS50297	ANK_REP_REGION	coord: 5..78 score: 17.98

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig11	contig	C-linearis_contig11:1008177..1008983 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig11.1209.1	mRNA_C-linearis_contig11.1209.1	Chordaria linearis ClinC8C monoicous	mRNA	C-linearis_contig11 1007128..1010343 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-linearis_contig11.1209.1 ID=prot_C-linearis_contig11.1209.1|Name=mRNA_C-linearis_contig11.1209.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=269bp
MATVHGDTPLCIPVVEGSPKALLALLQKGGVVSVQDNVGKTPLHLACCGQ
RKGIEAVVDTLLRWGADETALDNAGDSPEDLLGKVNDGRGTCSQEVIERV
RLLLARAPADRAWRRRGWLAVLRARASRANANANAGGEGAEDSDDAGDGA
GESQQVGREDFVGVGGDVGGQASSGASEVGTEVLDGVGNKVFSGVVVRLV
GLRPGGVSHGPGVFVRKISRSRCMMSDCFHVYVLCFGQVAAVFLLWIAVV
RNLRVKRRNLATRKLCSR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036770	Ankyrin_rpt-contain_sf
IPR002110	Ankyrin_rpt
IPR020683	Ankyrin_rpt-contain_dom