prot_C-linearis_contig11.1181.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig11.1181.1
Unique Nameprot_C-linearis_contig11.1181.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length401
Homology
BLAST of mRNA_C-linearis_contig11.1181.1 vs. uniprot
Match: A0A6H5KY82_9PHAE (RECA_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY82_9PHAE)

HSP 1 Score: 470 bits (1209), Expect = 8.940e-162
Identity = 289/436 (66.28%), Postives = 312/436 (71.56%), Query Frame = 0
Query:    1 MAYRPRM-SGVGIGGVGCPPGAQFGAGRRQQSSHGQRQQQQRPHQNQPRAAGGKAAGKVKPDPWLAGTAPPCTTGLAMSRDSGRLDKLSFGCPNLDKAFEGGVRVHGITEIAGEAGAGKTQLCLQLLLQAQLAVEAGGLGGKSYVLTCGEGGFPSRRLSQMAASFQSRHGVRPEKLMEGVCIQNAKNLDDQMMIIMEHLPIIMRSNNIKLVVIDSIAALFRSDMGRGRGDIGERSRLLGRLSQQMKRLSDRHGAAFVVVNQVTAKFGSTAAGGSGGVVRDGGG-----------NVPAMGLLWSQCINARFMVRRRDHRLSLQPSPNSYPRDHQASPPQVADRGRGQQN-------------------------PXXXXXXXXXXXXXXXXXXGCGFSNGIGSAIAREITLEMSPCVPVHASCGFVIEREGVRGVG 399
            M  R R+ SG GI GVGCPPG Q+G  RRQ            PH  Q     GK+    KPDPWLAGTAP CTT LAM +++ RLD+LSFGCP+LD AFEGGVRV GITEIAGEAGAGKTQLCLQLLLQAQLA EAGGLGGKSYVLTCGEG FPSRRL QMA+++QSRHGV+PEKLMEGVCIQNAK LDDQMMIIMEHLP IMRS N+KLVVIDSIAALFRSD+G GRGDIGERSRLLGRLSQQMKRL DRHGAAFVVVNQVTAKFGS+  GG                     +VPAMGLLWSQCIN RF VRRRD+RLSLQP P+S     Q + P   D+     +                          XXXXXXXXXXXXXXXXXX         SAIAREITL+MSPCVPVHA CGFV+ER GVRGVG
Sbjct:    3 MDSRSRLVSGGGIRGVGCPPGPQYGVNRRQP-----------PHGQQQHRLSGKSN---KPDPWLAGTAPECTTALAMLKNAARLDRLSFGCPSLDAAFEGGVRVQGITEIAGEAGAGKTQLCLQLLLQAQLAPEAGGLGGKSYVLTCGEGDFPSRRLRQMASTYQSRHGVKPEKLMEGVCIQNAKTLDDQMMIIMEHLPHIMRSQNVKLVVIDSIAALFRSDLGCGRGDIGERSRLLGRLSQQMKRLGDRHGAAFVVVNQVTAKFGSSTIGGGXXXXXXXXXXXXXXXXXXXXSVPAMGLLWSQCINTRFKVRRRDYRLSLQPPPSSESGSRQRATPNPRDQNSSSLSLPSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAIAREITLDMSPCVPVHARCGFVVERSGVRGVG 424          
BLAST of mRNA_C-linearis_contig11.1181.1 vs. uniprot
Match: D8LGE7_ECTSI (RECA_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGE7_ECTSI)

HSP 1 Score: 429 bits (1104), Expect = 2.900e-147
Identity = 234/307 (76.22%), Postives = 251/307 (81.76%), Query Frame = 0
Query:    1 MAYRPRM-SGVGIGGVGCPPGAQFGAGRRQQSSHGQRQQQQRPHQNQPRAAGGKAAGKVKPDPWLAGTAPPCTTGLAMSRDSGRLDKLSFGCPNLDKAFEGGVRVHGITEIAGEAGAGKTQLCLQLLLQAQLAVEAGGLGGKSYVLTCGEGGFPSRRLSQMAASFQSRHGVRPEKLMEGVCIQNAKNLDDQMMIIMEHLPIIMRSNNIKLVVIDSIAALFRSDMGRGRGDIGERSRLLGRLSQQMKRLSDRHGAAFVVVNQVTAKFGSTAAGGSGG-------VV--RDGGGNVPAMGLLWSQCINA 297
            M  R R+ SG GI GVGCPPG Q+G  RRQ            PH  QP    GK++   KPDPWLAGTAP CTT LAMS+D+ RLD+LSFGCP+LD AFEGGVRV G+TEIAGEAGAGKTQLCLQLLLQAQLA EAGGLGGKSYVLTCGEG FPSRRL QMA+++QSRHGV+PEKLMEGVCIQNAK LDDQMMIIMEHLP IMRS N+KLVVIDSIAALFRSDMGRGRGDIGERSRLLGRLSQQMKRL DRHGAAFVVVNQVTA+FGS+  GG GG       VV    GGG+VPAMGLLWSQCINA
Sbjct:    3 MDSRSRVVSGGGISGVGCPPGPQYGVNRRQS-----------PHGQQPHRLSGKSS---KPDPWLAGTAPECTTALAMSKDAARLDRLSFGCPSLDAAFEGGVRVQGVTEIAGEAGAGKTQLCLQLLLQAQLAPEAGGLGGKSYVLTCGEGDFPSRRLRQMASTYQSRHGVKPEKLMEGVCIQNAKTLDDQMMIIMEHLPHIMRSQNVKLVVIDSIAALFRSDMGRGRGDIGERSRLLGRLSQQMKRLGDRHGAAFVVVNQVTARFGSSTIGGGGGRGQGTMGVVGGSGGGGSVPAMGLLWSQCINA 295          
BLAST of mRNA_C-linearis_contig11.1181.1 vs. uniprot
Match: A0A4D9CSH0_9STRA (RECA_2 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CSH0_9STRA)

HSP 1 Score: 184 bits (466), Expect = 7.680e-51
Identity = 129/349 (36.96%), Postives = 185/349 (53.01%), Query Frame = 0
Query:   70 PCTTGLAMSRDSGRLDKLSFGCPNLDKAFEGGVRVHGITEIAGEAGAGKTQLCLQLLLQAQLAVEAGG---------LGGKSYVLTCGEGGFPSRRLSQMAASFQSRHGVRPEKLMEGVCIQNAKNLDDQMMIIMEHLPIIMRS---NNIKLVVIDSIAALFRSDMGRGRGDIGERSRLLGRLSQQMKRLSDRHGAAFVVVNQVTAKFGSTA----AGGSGGVVRDGGGNVPAMGLLWSQCINARFMVRRRD--HRLSLQPSPNSYPRDHQASPPQVADRGRGQQNPXXXXXXXXXXXXXXXXXXGCGFSNGIGSAIAREITLEMSPCVPVHASCGFVIEREGVRGVGR 400
            P  T   + +D     ++S GCP LD  F GG+  HG+ E++G AGAGKTQL LQLL+Q     EA           + G+S+ L+  EG  P++RL++MAA+         ++++E V I  AKN++DQ+ ++   LP ++       I+L VIDS++ALFR +    +GD  ER++++  +++QMKRLSDR G  FVV NQVTA F +       GG+  VV DG    PA+GL WS C++ RF++ RRD  + +   P+P S P     S P  AD                              S G  S   R + L +SP +P + SC FV+E  GVRGV R
Sbjct:   38 PPRTAYDLYQDEKHTRRVSLGCPVLDATFRGGLPGHGVVEVSGMAGAGKTQLMLQLLVQQVRDAEAEWRRAKYATPFVAGRSFYLST-EGPLPAKRLAEMAAATCPEDSGFAQRVLESVIIVEAKNVEDQLYLLTTQLPSLLGDASLGKIRLCVIDSMSALFRGEFSLSKGDTLERAKMIFTMAKQMKRLSDRWGLPFVVTNQVTADFAAATFGVWEGGNADVVGDG--VQPALGLSWSNCVHTRFLLSRRDANNLIPSFPTPGSNP----PSNPATADAR----------------------------STGQSSRWIRHMRLLLSPSLPSNLSCRFVLETAGVRGVRR 351          
BLAST of mRNA_C-linearis_contig11.1181.1 vs. uniprot
Match: L8GYS6_ACACA (DNA repair protein XRCC3, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GYS6_ACACA)

HSP 1 Score: 165 bits (418), Expect = 2.020e-43
Identity = 121/337 (35.91%), Postives = 181/337 (53.71%), Query Frame = 0
Query:   75 LAMSRDSGRLDKLSFGCPNLDKAFEGGVRVHGITEIAGEAGAGKTQLCLQLLLQAQLAVEAGGLGGKS-YVLTCGEGGFPSRRLSQMAASFQSRHG-VRPEK-----LMEGVCIQNAKNLDDQMMIIMEHLPIIMRSNNIKLVVIDSIAALFRSDMGRGRGDIGERSRLLGRLSQQMKRLSDRHGAAFVVVNQVTAKFGSTAAGGSGGVVRDGGGN----VPAMGLLWSQCINARFMVR--RRDHRLSLQPSPNSYPRDHQASPPQVADRGRGQQNPXXXXXXXXXXXXXXXXXXGCGFSNGIGSAIAREITLEMSPCVPVHASCGFVIEREGVRGV 398
            LA++ D     KL  GCP LD+   GG+    ITEIAGEAG+GKTQLCLQL LQ QL  E GGLGG + Y+ T  EG FP RRL Q+  +F+ +H  V P +     L + + I++  ++D     +++ +P +++  N++LV++DSIAAL R + G G   + ERSR+L   + Q+K+++D+     VV+NQV+     +       V+ D   +    VPA+GL WS CIN+R ++   R  +R ++  S  S   D         D G G++                        SN +   I R++ +  SP +P + SC F+IE +GVRGV
Sbjct:   97 LALASDPSFTHKLKLGCPLLDQCLGGGLLPRHITEIAGEAGSGKTQLCLQLALQVQLPPEEGGLGGGAIYIGT--EGNFPQRRLDQLHEAFRHKHAHVFPPRRKGFDLRDNIYIKHVGSIDQLFHSMLKQVPPLVQQRNVRLVIVDSIAALLRYEYGSGTSQMVERSRVLFSQANQLKQIADQLQVVVVVINQVSDYVDDSRL-----VLSDFAAHKKRVVPALGLAWSNCINSRLLLSKTRSTYRGAVSSSTVSNASD---------DDGEGEEGQERKPKKRRV-------------SNEVTVGI-RDMKVVFSPYIP-NNSCSFIIEGDGVRGV 402          
BLAST of mRNA_C-linearis_contig11.1181.1 vs. uniprot
Match: A0A6P8HU42_ACTTE (DNA repair protein XRCC3-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HU42_ACTTE)

HSP 1 Score: 147 bits (370), Expect = 5.110e-37
Identity = 92/240 (38.33%), Postives = 135/240 (56.25%), Query Frame = 0
Query:   69 PPCTTGLAMSRDSGRLDKLSFGCPNLDKAFEGGVRVHGITEIAGEAGAGKTQLCLQLLLQAQLAVEAGGLGGKSYVLTCGEGGFPSRRLSQMAASF---QSRHGVRPEKLMEGVCIQNAKNLDDQMMIIMEHLPIIMRSNNIKLVVIDSIAALFRSDMGRGRGDIGERSRLLGRLSQQMKRLSDRHGAAFVVVNQVTAKFGSTAAGGSGGVVRDGGGNVPAMGLLWSQCINARFMVRRRD 305
            PP  T L +   S     LS GCP LDKA  GG+   GITEI GE+ +GKTQLCLQL L  QL  + GGLG K  +  C E  FPSRRL Q+  +F   Q++      K  + + I++A +++D   II   LP+++ +  +KLVV+DS+AALFR +  +   +  +R++ L     Q+ ++S ++  A + VNQV+   G+  A   G       G +PA+GL WS  +  R M+ R +
Sbjct:   58 PPVQTALELYHSSNG-SYLSTGCPILDKALRGGITCQGITEITGESASGKTQLCLQLCLSVQLPRDCGGLG-KGALYICTEDVFPSRRLQQLIPAFLKKQNKKATEHLKPGDNIYIEHAADVEDLRSIIFHRLPLLLNNGKVKLVVVDSVAALFRVEYSQN--ETFKRAKALMSFGAQLHKISHQYNVAVICVNQVSDVVGNNNASSLGCK-----GVIPALGLAWSSMVTVRLMLSRTE 288          
BLAST of mRNA_C-linearis_contig11.1181.1 vs. uniprot
Match: UPI00201F90D8 (DNA repair protein XRCC3-like isoform X1 n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201F90D8)

HSP 1 Score: 145 bits (366), Expect = 1.840e-36
Identity = 95/258 (36.82%), Postives = 145/258 (56.20%), Query Frame = 0
Query:   69 PPCTTGLAMSRDSGR---LDKLSFGCPNLDKAFEGGVRVHGITEIAGEAGAGKTQLCLQLLLQAQLAVEAGGLGGKSYVLTCGEGGFPSRRLSQMAASFQSRHGVRPEKLME-------GVCIQNAKNLDDQMMIIMEHLPIIMRSNNIKLVVIDSIAALFRSDMGRGRGDIGERSRLLGRLSQQMKRLSDRHGAAFVVVNQVTAKFGSTAAGGSGGVVRDGGGNVPAMGLLWSQCINARFMVRRRDHRLSLQPSPNS 316
            PP  T L + R SG    + KLS GCP +DK  +GG+   GITEI+GE+ +GKTQLCLQL L +QL  E GGLGG + V  C E  FP++RL Q+   F  +    P +L +        + +++    +  M+ + + +PI++    +KLVVIDS+AALFR + G+G  +  +R++ +   + Q+ +L  +H    V VNQV+A     +   S   V      +PA+GL W+  I  R M+RR   ++++Q  P S
Sbjct:   60 PPVVTALDLLRGSGSAVPIRKLSTGCPIIDKHLKGGILSRGITEISGESASGKTQLCLQLCLTSQLPPEHGGLGGGA-VYVCTEDVFPNKRLHQVIQHFTRKWS--PPRLQQDLANLGDNIFVEHVAEREGLMLCVHKKIPILLAKGMVKLVVIDSVAALFRCEYGQG--ETVKRAKHMASFAAQLHKLGQQHNVPIVCVNQVSANLSPNS---SRSQV------LPALGLSWANHITCRLMLRRTHQKVAVQVQPAS 303          
BLAST of mRNA_C-linearis_contig11.1181.1 vs. uniprot
Match: M4C671_HYAAE (RECA_2 domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C671_HYAAE)

HSP 1 Score: 142 bits (359), Expect = 5.680e-36
Identity = 93/255 (36.47%), Postives = 131/255 (51.37%), Query Frame = 0
Query:   68 APPCTTGLAMSRDSGRLDKLSFGCPNLDKAFEGGVRVHGITEIAGEAGAGKTQLCLQLLLQAQLAVEAGGLGGKSYVLTCGEGGFPSRRLSQMAASFQSRHG-------------------VRPEKLMEGVCIQNAKNLDDQMMIIMEHLPIIMRSNNIKLVVIDSIAALFRSDMGRGRGDIGERSRLLGRLSQQMKRLSDRHGAAFVVVNQVTAKFGSTAAGGSGGVVRDGGGNVPAMGLLWSQCINARFMVRR 303
            A P    L  SRD   +  LS GC ++D    GG R   +TE+ GEAGAGKTQLCLQLLLQ  L    GGL G +  + C EG    +RL  +A  +  RH                    V P   ++G+ ++    +DD + ++   LP ++  +N KLV +DS+AA+FR +      D  ER+R +  ++  M+ LSD++G  FV+ NQVT  F + +          G G  PA+GL WS CIN R M+ R
Sbjct:    2 AAPSALTLWASRDVTSI-VLSSGCDSIDALLNGGFRSSLLTEVCGEAGAGKTQLCLQLLLQCCLPRSLGGLQGTACYI-CTEGVMSIKRLHDLAHVYARRHDKAAVFGVGGKRKRREVTPTVTPSDFLDGIFVEQLYTVDDLLRLLQTRLPALLAEHNTKLVALDSVAAVFRLESTSSVKDATERARTMFYMANCMRILSDQYGVVFVLTNQVTGDFDARS-------TTHGNGLRPALGLSWSHCINQRLMITR 247          
BLAST of mRNA_C-linearis_contig11.1181.1 vs. uniprot
Match: UPI0018D6087D (DNA repair protein XRCC3-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D6087D)

HSP 1 Score: 144 bits (362), Expect = 9.980e-36
Identity = 106/320 (33.12%), Postives = 157/320 (49.06%), Query Frame = 0
Query:   83 RLDKLSFGCPNLDKAFEGGVRVHGITEIAGEAGAGKTQLCLQLLLQAQLAVEAGGL-GGKSYVLTCGEGGFPSRRLSQMAASFQSRHGV---RPEKLMEGVCIQNAKNLDDQMMIIMEHLPIIMRSNNIKLVVIDSIAALFRSDMGRGRGDIGERSRLLGRLSQQMKRLSDRHGAAFVVVNQVTAKFGSTAAGGSGGVVRDGGGNVPAMGLLWSQCINARFMVRRRDHRLSLQPSPNSYPRDHQASPPQVADRGRGQQNPXXXXXXXXXXXXXXXXXXGCGFSNGIGSAIAREITLEMSPCVPVHASCGFVIEREGVRGV 398
            R+  L  GC  LD    GG+   GITEIAGE+ AGKTQLC+QL L  Q + E GGL GG  Y+  C E  FPS+RL Q+  +FQ +      R  KL + + I++   +D  +  I   +P++++ + +KL+V+DS+AALFR +   G  +  +R++ L  L  Q+ RLS  H    + VNQVTA   S      G +  +    +PA+GL WS  I  R M+ R  ++LS   +           PP+  D  + Q                           G      R + +  +P +P + +C FV+E  GVRG+
Sbjct:   87 RVSCLRTGCEVLDGFLRGGILTPGITEIAGESAAGKTQLCMQLCLSVQRSTENGGLAGGAVYI--CTEDVFPSKRLHQLIQNFQKKLDATECRQLKLGDNIFIEHLSEIDQLVHCIQYRIPLLLKQSQVKLIVVDSVAALFRCEFSPG--EAAKRAKRLQSLGAQLHRLSRLHHVPVICVNQVTANMSS------GSLNPNQRQLIPALGLAWSNLIQTRLMLGRTAYKLSSGDA---------VCPPRPEDATQTQA--------------------------GTDEVPVRSMEVVFAPHLP-NDTCYFVVEAAGVRGL 360          
BLAST of mRNA_C-linearis_contig11.1181.1 vs. uniprot
Match: UPI001EE62721 (DNA repair protein XRCC3-like isoform X1 n=4 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE62721)

HSP 1 Score: 142 bits (357), Expect = 3.720e-35
Identity = 92/253 (36.36%), Postives = 142/253 (56.13%), Query Frame = 0
Query:   69 PPCTTGLAMSRDSGR---LDKLSFGCPNLDKAFEGGVRVHGITEIAGEAGAGKTQLCLQLLLQAQLAVEAGGL-GGKSYVLTCGEGGFPSRRLSQMAASFQSRHGVRPEKLME-------GVCIQNAKNLDDQMMIIMEHLPIIMRSNNIKLVVIDSIAALFRSDMGRGRGDIGERSRLLGRLSQQMKRLSDRHGAAFVVVNQVTAKFGSTAAGGSGGVVRDGGGNVPAMGLLWSQCINARFMVRRRDHRLSL 310
            PP  T L + + SG    + KLS GCP +D+  +GG+   GITEI+GE+ +GKTQLCLQL L AQL +E GGL GG  YV  C E  FP++RL Q+   F  +    P +L +        + +++    +  M  + + +PI++    +KLV+IDS+AALFR + G+G  +  +R++ +   +  + +L  +H    V VNQV+A   S ++  S          +PA+GL WS  I  R M+RR   +++L
Sbjct:   63 PPVVTALELLKGSGSVVPIRKLSTGCPIIDRHLKGGILSTGITEISGESASGKTQLCLQLCLTAQLPLEHGGLEGGAVYV--CTEDAFPNKRLHQVIQHFTRKWS--PPRLQQDLANLGDNIFVEHVAEHEGLMFCVHKKIPILLAKGMVKLVIIDSVAALFRCEYGQG--ETVKRAKHMASFAAHLHKLGHQHNVPIVCVNQVSANLSSNSSQSS---------VLPALGLSWSNQITCRLMLRRTRQKVAL 300          
BLAST of mRNA_C-linearis_contig11.1181.1 vs. uniprot
Match: UPI001CF104BC (DNA repair protein XRCC3-like isoform X1 n=2 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF104BC)

HSP 1 Score: 142 bits (357), Expect = 4.600e-35
Identity = 93/248 (37.50%), Postives = 134/248 (54.03%), Query Frame = 0
Query:   69 PPCTTGLAMSRDSGRLDKLSFGCPNLDKAFEGGVRVHGITEIAGEAGAGKTQLCLQLLLQAQLAVEAGGLGGKSYVLTCGEGGFPSRRLSQMAASFQ------SRHGVRPEKLMEGVCIQNAKNLDDQMMIIMEHLPIIMRSNNIKLVVIDSIAALFRSDMGRGRGDIGERSRLLGRLSQQMKRLSDRHGAAFVVVNQVTAKFGSTAAGGSGGVVRDGGGNVPAMGLLWSQCINARFMVRRRDHRLSL 310
            P   T L++   S +  +LS GC  LD    GG+   GITE+AGE+ +GKTQ+CLQL L  QL  E GGLGG +  ++  E  FPS+RL Q+   F       S   + P    + + I++A ++DD   II   LP+++    IKLV+IDSIAALFR +      +  +R+++L     Q+ +LS +H   FV VNQV+    S    G  G  R     +PA+GL WS  +  R M+ R +  + L
Sbjct:   61 PAMKTALSLHLGSSKGQRLSLGCQILDGCLHGGILKQGITEVAGESSSGKTQICLQLCLTVQLPEEKGGLGGGAVYIST-EDVFPSKRLHQLTQYFVKNQTNLSNSSINPS---DNIFIEHAADVDDLRNIITHRLPVLLNRGTIKLVIIDSIAALFRVEYSFS--ETSKRAKVLRSFGAQLHKLSHQHKIPFVCVNQVSDVIQSETKRGLSGNHR---AVIPALGLAWSSMLTMRLMLHRTEQFIEL 299          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1181.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KY82_9PHAE8.940e-16266.28RECA_2 domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LGE7_ECTSI2.900e-14776.22RECA_2 domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A4D9CSH0_9STRA7.680e-5136.96RECA_2 domain-containing protein n=2 Tax=Monodopsi... [more]
L8GYS6_ACACA2.020e-4335.91DNA repair protein XRCC3, putative n=1 Tax=Acantha... [more]
A0A6P8HU42_ACTTE5.110e-3738.33DNA repair protein XRCC3-like n=1 Tax=Actinia tene... [more]
UPI00201F90D81.840e-3636.82DNA repair protein XRCC3-like isoform X1 n=1 Tax=H... [more]
M4C671_HYAAE5.680e-3636.47RECA_2 domain-containing protein n=1 Tax=Hyalopero... [more]
UPI0018D6087D9.980e-3633.13DNA repair protein XRCC3-like n=1 Tax=Patiria mini... [more]
UPI001EE627213.720e-3536.36DNA repair protein XRCC3-like isoform X1 n=4 Tax=H... [more]
UPI001CF104BC4.600e-3537.50DNA repair protein XRCC3-like isoform X1 n=2 Tax=A... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013632DNA recombination and repair protein Rad51-like, C-terminalPFAMPF08423Rad51coord: 79..305
e-value: 9.4E-46
score: 156.1
IPR016467DNA recombination and repair protein, RecA-likePIRSFPIRSF005856Rad51coord: 65..319
e-value: 1.3E-49
score: 166.9
coord: 365..399
e-value: 16.0
score: 2.3
NoneNo IPR availablePANTHERPTHR46487FAMILY NOT NAMEDcoord: 36..399
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..17
score: 6.0
IPR020588DNA recombination and repair protein RecA-like, ATP-binding domainPROSITEPS50162RECA_2coord: 83..261
score: 39.494
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 85..303

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig11contigC-linearis_contig11:564636..569531 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig11.1181.1mRNA_C-linearis_contig11.1181.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig11 564629..570183 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig11.1181.1 ID=prot_C-linearis_contig11.1181.1|Name=mRNA_C-linearis_contig11.1181.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=401bp
MAYRPRMSGVGIGGVGCPPGAQFGAGRRQQSSHGQRQQQQRPHQNQPRAA
GGKAAGKVKPDPWLAGTAPPCTTGLAMSRDSGRLDKLSFGCPNLDKAFEG
GVRVHGITEIAGEAGAGKTQLCLQLLLQAQLAVEAGGLGGKSYVLTCGEG
GFPSRRLSQMAASFQSRHGVRPEKLMEGVCIQNAKNLDDQMMIIMEHLPI
IMRSNNIKLVVIDSIAALFRSDMGRGRGDIGERSRLLGRLSQQMKRLSDR
HGAAFVVVNQVTAKFGSTAAGGSGGVVRDGGGNVPAMGLLWSQCINARFM
VRRRDHRLSLQPSPNSYPRDHQASPPQVADRGRGQQNPPPRDSSSQNSSN
SVGGGGGCGFSNGIGSAIAREITLEMSPCVPVHASCGFVIEREGVRGVGR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013632DNA_recomb/repair_Rad51_C
IPR016467DNA_recomb/repair_RecA-like
IPR020588RecA_ATP-bd
IPR027417P-loop_NTPase