prot_C-linearis_contig11.1169.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig11.1169.1
Unique Nameprot_C-linearis_contig11.1169.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length126
Homology
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BLAST of mRNA_C-linearis_contig11.1169.1 vs. uniprot
Match: UPI000AC9CAB8 (CD225/dispanin family protein n=1 Tax=Corynebacterium jeikeium TaxID=38289 RepID=UPI000AC9CAB8)

HSP 1 Score: 63.5 bits (153), Expect = 4.090e-10
Identity = 29/79 (36.71%), Postives = 47/79 (59.49%), Query Frame = 0 
Query:   32 PPQSHIPPQNFSFLAWLSCLCFCWPIGAFAISASRDVDYRWARGDFDGSREASRRAKRLSTTATVVGIVYGFLRFLFFL 110
            P   + PP N+ +   L+ L  C P+GA  I  S  V+ RW RGD+ GS++AS +AK L+  + ++ + +  L F+FF+
Sbjct:   66 PGVGNTPPDNWMWATILATLLCCLPLGAIGIYYSSQVESRWYRGDYQGSQDASNKAKNLALASAIISVSFIVLYFVFFV 144
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BLAST of mRNA_C-linearis_contig11.1169.1 vs. uniprot
Match: T2M739_HYDVU (Proline-rich transmembrane protein 1 n=2 Tax=Hydra vulgaris TaxID=6087 RepID=T2M739_HYDVU)

HSP 1 Score: 57.4 bits (137), Expect = 1.670e-7
Identity = 33/99 (33.33%), Postives = 49/99 (49.49%), Query Frame = 0 
Query:   12 QAGLLADESGQACHGVPVEAPPQSHIPPQNFSFLAWLSCLCFCWPIGAFAISASRDVDYRWARGDFDGSREASRRAKRLSTTATVVGIVYGFLRFLFFL 110
            Q  ++ +   +A    P+ + P    PP N+S LAWL+CL  CWP+G  AI  S +V+   A G+   ++ AS  AKR    +   GI       LF +
Sbjct:   87 QGTVITNPQTEAIQSFPLYSGP----PPDNYSILAWLTCLFCCWPLGLCAIVKSIEVNTAIAEGNLSRAKFASDNAKRFGFMSLCTGIFIHGAWILFLI 181
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1169.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
UPI000AC9CAB84.090e-1036.71CD225/dispanin family protein n=1 Tax=Corynebacter... [more]
T2M739_HYDVU1.670e-733.33Proline-rich transmembrane protein 1 n=2 Tax=Hydra... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007593CD225/Dispanin familyPFAMPF04505CD225coord: 38..101
e-value: 4.7E-18
score: 65.1
NoneNo IPR availablePANTHERPTHR14948:SF25coord: 27..122
NoneNo IPR availablePANTHERPTHR14948NG5coord: 27..122
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 65..89
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 44..64
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..43
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 111..125
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 90..110
NoneNo IPR availableTMHMMTMhelixcoord: 42..64
NoneNo IPR availableTMHMMTMhelixcoord: 90..109

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig11contigC-linearis_contig11:459048..464766 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig11.1169.1mRNA_C-linearis_contig11.1169.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig11 458192..465208 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig11.1169.1 ID=prot_C-linearis_contig11.1169.1|Name=mRNA_C-linearis_contig11.1169.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=126bp
MTTPVSEVAQVQAGLLADESGQACHGVPVEAPPQSHIPPQNFSFLAWLSC
LCFCWPIGAFAISASRDVDYRWARGDFDGSREASRRAKRLSTTATVVGIV
YGFLRFLFFLQPTTTQHSTGTHAHH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007593CD225/Dispanin_fam