prot_C-linearis_contig109.1099.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig109.1099.1
Unique Nameprot_C-linearis_contig109.1099.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length1878
Homology
BLAST of mRNA_C-linearis_contig109.1099.1 vs. uniprot
Match: A0A6H5L195_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L195_9PHAE)

HSP 1 Score: 1204 bits (3116), Expect = 0.000e+0
Identity = 878/1313 (66.87%), Postives = 939/1313 (71.52%), Query Frame = 0
Query:  661 SRGLTREARLLLLEALAGATGRALGDVVFETT--GRGLTLQPATKKSSXXXXXXXXXXXXX-----------VIAQPDPVWFADLRATARRAWGGGLPVDSHGGVDLDSPPLALQEMDGSGXXXXXXXXXXXWVPIGARASGAGRAEVDGEGALVPEFDERIAARMAQELFLEIAEGKGPGRVSSRAQASLVRANFRSALARSRGAGPPASLSELADRTLTSFEETDLELALAAGQLVADKLKIIKP-APPATPNTKTTANADKRKXXXXXXXXXXXXXXXXXSYS----------------------------------KKDAQKDAKFTVPNTDEDSEMKAKNSSSDTVSGKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAAPASRAGEMGGFWAASTLLQESLACNYTAGAEIVLETMRKEGHWPRTSTYNTLLWYFRQERDARGALSMLQSLRESKYVNPDQMSYTLAIQACVWSGSCVDEAWSVVEEAEAAH---DYSFASKDLPDARLILIQAVGGDVLEGLKDMSGKGVTPDEATLLGVIKACAERGDTKGALDVLQMMRGASSS-----------------SSYPCPRPSYRSYLAALTACSRVLPAAADDDDPDKKIGDKDVEGDGAGGTVQQQQERGDWRASKEVLRMMWEDEAKRVAK--------------------------GDVAVPGTWSADLQQALSLGPSHVTMPAVPDAACYRLAMECCVACGRNDEALSLLAEMESRGLSPNEAALRALIRGFAQEGL--DDGGAVGSTAAERAERRWKGVENALGVFEELAERFDPPSSRASFEQAIDACVSHPDSLQHAGDLISRMKAVGHDLQADHYNVLIRGFGDARNLGAALSVFQTMREGVAVGGPGGGPRSRTLGWEVEEDMFAALVGACTRSGEAENVSEAIGFLRMNGVNPPSEILSYLQNEEFESELYDEIFGEKDRLAGKGKEQRSRGRKYGTHALAAHLI-GAGGVGRGMAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGKRGGGA----KQRENQTFAEAVRDSLKRAEARRTKSNKVEEDGGAFPGNPRHPVGWVGTFTETFTHAERKEEALKRRAGEARSRERRLKRQEAERLAAIXXXXXXXXXXXXNPGT--SGDGKTSAIPRSIDKPKGGFDGAAEASGTGDRRTGGALSA-HXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSFSEEPSPALDEVVAGLRRKGSNSKWRSRRGSGMSAVASQPLVKRK 1869
            +RGLTREARL LLEALA ATGRALG+VVFET   GRGLTL P +K   XXXXXXXXXXXXX           ++AQPDP WF  LRATARRAW GG   D+ G  DL++PP  + E  G G           WVP+GARA+G GRAEVDGEGALVP FD RIAARMAQELF E+A GK  GRVSSRAQASLVRA FRS LA SRGA PPASLSELADRTLTSF+ETDLELAL AGQL AD+LKI  P   PA+             XXXXXXXXXXXXXXXXX                                     K    K+        ++    +  +S +       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             A PASRAGEMG FWAASTLLQESLACNYTAGAEIVL TM KEG W  TSTYNTLLWYFRQERDA+GALSMLQSLRES+ V PDQ SYTLAIQACVWSGS V+EAW++VEEA+AA    DYSFASKDL DARL L+QAVGGDVL GL++MS +GVT DE+T+LGVI+ACA+RGD  GALD+LQMMRGA                    ++  CPRPSYRSYLAA                           GDG          RGDWRA+KEVLRMMWEDEA R                             G +A  GTWS +LQ+AL LGPSHVTMPAVPDAACY+LAMECCV+ GRNDEAL+LL+EME RGLSPNEAALRALIRGFA EG+  D GG   +   ERAERRW+GVENALGVFEELAERFDPPS RASFEQAIDACVSHPD LQHAGDLISRMK+VGHDLQADHYNVLIRGFGDARNLGAAL+VFQTMREGVAVGGPGGG RSRTLGWEVEEDMFAALVGACTRSGEAENVSEAIGFLRMNGVNPPSEILSYLQNEEFESELYDEIFGEKDRLAGK KEQRSRGRKYGTHALAAHLI G+GG   GM +XXXXXXXXXXX      XXXXXXXXXX   A    G GA    K RE QTFAEA R  L+RAE RR K  +VEEDGGAF  NPRHPVGWVGTFTETFTHAERKEEALKRRAGEARSRERRLKR+EAERLAA XXXXXXXXXXXX      SG  KT AIPRSIDKPKGGFD AAE+           + A  XXXXXXXXXXXXXXXXXXXXX                       GS SEEPSP L+ VVAGLRRKGSNSK RSRRGSG+SAV SQPLV+RK
Sbjct:   15 NRGLTREARLRLLEALAVATGRALGNVVFETAAAGRGLTLAPLSKIKQXXXXXXXXXXXXXXXXXXXASATAIVAQPDPAWFETLRATARRAWSGGGGCDADGN-DLEAPPRLVPEAGGFGCGNGGGG----WVPVGARAAGTGRAEVDGEGALVPAFDARIAARMAQELFSEMAAGKEAGRVSSRAQASLVRAKFRSTLALSRGAAPPASLSELADRTLTSFDETDLELALQAGQLTADQLKIKNPKTTPASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNVRGKERGSADVGKNKTKGREGPSSPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATSGQKEEKVERKAGPASRAGEMGRFWAASTLLQESLACNYTAGAEIVLHTMSKEGLWATTSTYNTLLWYFRQERDAKGALSMLQSLRESENVKPDQSSYTLAIQACVWSGSRVEEAWAIVEEAQAAATGGDYSFASKDLLDARLALVQAVGGDVLHGLREMSERGVTADESTMLGVIEACAQRGDAAGALDILQMMRGAXXXXXXXXXXXXXXXXXXXXATAVCPRPSYRSYLAAXXXXXXXXXXXXX-----XXXXXXXXSGDGV---------RGDWRAAKEVLRMMWEDEAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGLAWCGTWSTELQEALRLGPSHVTMPAVPDAACYQLAMECCVSGGRNDEALALLSEMEGRGLSPNEAALRALIRGFALEGVVADGGGGGPAAERERAERRWRGVENALGVFEELAERFDPPS-RASFEQAIDACVSHPDGLQHAGDLISRMKSVGHDLQADHYNVLIRGFGDARNLGAALNVFQTMREGVAVGGPGGGARSRTLGWEVEEDMFAALVGACTRSGEAENVSEAIGFLRMNGVNPPSEILSYLQNEEFESELYDEIFGEKDRLAGKAKEQRSRGRKYGTHALAAHLIRGSGG---GMVSXXXXXXXXXXXEDSGEVXXXXXXXXXXSASARRVGGNGAAGSIKNREEQTFAEAARGILRRAEERRMKVERVEEDGGAFSANPRHPVGWVGTFTETFTHAERKEEALKRRAGEARSRERRLKRREAERLAAXXXXXXXXXXXXXXXXXXXSGSAKTVAIPRSIDKPKGGFDAAAESXXXXXXXXXXRVGALXXXXXXXXXXXXXXXXXXXXXXGSRLEPRRKPVLVKTGGGGSGVQGSLSEEPSPVLEAVVAGLRRKGSNSKGRSRRGSGLSAVPSQPLVRRK 1304          
BLAST of mRNA_C-linearis_contig109.1099.1 vs. uniprot
Match: D8LKT0_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKT0_ECTSI)

HSP 1 Score: 1088 bits (2813), Expect = 0.000e+0
Identity = 775/1142 (67.86%), Postives = 822/1142 (71.98%), Query Frame = 0
Query:  813 MAQELFLEIAEGK-------------GPGRVSSRAQASLVRANFRSALARSRGAGPPASLSELADRTLTSFEETDLELALAAGQLVADKLKIIKPAPPATPNTKTTANADKRKXXXXXXXXXXXXXXXXXSYSKKDAQ---------------------------------------KDAKFTVPNTDEDSEMKAKNS----SSDTVSGKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAAPASRAGEMGGFWAASTLLQESLACNYTAGAEIVLETMRKEGHWPRTSTYNTLLWYFRQERDARGALSMLQSLRESKYVNPDQMSYTLAIQACVWSGSCVDEAWSVVEEAEAAH---DYSFASKDLPDARLILIQAVGGDVLEGLKDMSGKGVTPDEATLLGVIKACAERGDTKGALDVLQMMRGASSS--------------SSYPCPRPSYRSYLAALTACSRVLPAAADDDDPDKKIGDKDVEGDGAGGTVQQQQERGDWRASKEVLRMMWEDEAKRVAKGDVAVPGTWSADLQQALSLGPSHVTMPAVPDAACYRLAMECCVACGRNDEALSLLAEMESRGLSPNEAALRALIRGFAQEGLDDGGAVGSTAA--ERAERRWKGVENALGVFEELAERFDPPSSRASFEQAIDACVSHPDSLQHAGDLISRMKAVGHDLQADHYNVLIRGFGDARNLGAALSVFQTMREGVAVGGPGGGPRSRTLGWEVEEDMFAALVGACTRSGEAENVSEAIGFLRMNGVNPPSEILSYLQNEEFESELYDEIFGEKDRLAGKGKEQRSRGRKYGTHALAAHLIGAGGVGRGMAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGKRGGGAKQRENQ--TFAEAVRDSLKRAEARRTKSNKVEEDGGAFPGNPRHPVGWVGTFTETFTHAERKEEALKRRAGEARSRERRLKRQEAERLAAIXXXXXXXXXXXXNPGTSGD-----GKTSAIPRSIDKPKGGFDGAAE-ASGTGDRRTG--GALSAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSFSEEPSPALDEVVAGLRRKGSNSKWRSRRGSGMSAVASQPLVKRK 1869
            MAQELF E+A GK              P RVSSRAQASLVRA FRS LARSRGA PPASLS+LADRTLTSF+ETDLELAL AGQL AD+LKI  P    TP + +T       XXXXXXXXXXXXXXXXX                                               K+A+     + +  + K K      S     G  XXXXXXXXXXXXXXX XXXXXXXX                              AAPASRAGEMG FWAASTLLQESLACNYTAGAEIVL+TM  EG W  TSTYNT LWYFRQERDA+GALSMLQSLRES+ V PDQ SYTLAIQACVWSGS V+EAW++VEEAEA     D SFASKDL DARL+L+QAVGGDVL+GLK+MS +GVT DE+T+LGVI+ACA+RGD  GALD+LQMMRGA                 ++  CPRPSYRSYLAAL                          GDG          RGDWRA+KEVLRMMWEDEA R AKGDVAVPGTWS +LQ+ALSLGPSHVTMPAVPDAACY+LAMECCV+ GRNDEAL LL+EME RGLSPNEAALRALIRGFA EG+   G  G  AA  ERAERRW+GVENALGVFEELAERFDPPS RASFEQAIDACVSHPD LQHAGDLISRMK+VGHDLQADHYNVLIRGFGDARNLGAAL+VFQTMREGVAVGGPGGG RSRTLGWEVEEDMFAALVGACTRSGEAENVSEAIGFLRMNGVNPPSEILSYLQNEEFESELYDEIFGEKDRLAGK KEQRSRGRKYGTHALAAHLIG  G       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                 TFAEAVRD L+RAE RR +  +VEEDGGAFP NPRHPVGWVGTFTETFTHAERKEEALKRRAGEARSRERRLKR+EAERLAA XXXXXXXXXXXX             KT AIP+SIDKPKGGFD AAE A G G RR G  GALSAHXXXXXXXXXXXXXXXXXXX                         GS SEEPSP L+ VVAGLRRKGSNSK RSRRGSG+SAV SQP+VKRK
Sbjct:    1 MAQELFSEMAAGKEAGSRQPTSPRRFAPVRVSSRAQASLVRAKFRSTLARSRGAAPPASLSDLADRTLTSFDETDLELALQAGQLTADQLKIKNPT--TTPASASTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNARGKERGSADVGKNKTKGGRGQPSPAAAKGGXXXXXXXXXXXXXXXXTXXXXXXXXASGKEKLQRGGSGDAETATGGQKKEKVERKAAPASRAGEMGRFWAASTLLQESLACNYTAGAEIVLDTMSNEGLWATTSTYNTFLWYFRQERDAKGALSMLQSLRESENVKPDQSSYTLAIQACVWSGSRVEEAWAIVEEAEAVATGGDSSFASKDLLDARLVLVQAVGGDVLQGLKEMSERGVTADESTMLGVIEACAQRGDAAGALDILQMMRGAXXXXXXXXXXXXXXXXXTTAVCPRPSYRSYLAALXXXXXXXXXXX--------XXXXXXSGDGV---------RGDWRAAKEVLRMMWEDEAARAAKGDVAVPGTWSTELQEALSLGPSHVTMPAVPDAACYQLAMECCVSGGRNDEALGLLSEMEGRGLSPNEAALRALIRGFALEGVVADGGGGGPAADRERAERRWRGVENALGVFEELAERFDPPS-RASFEQAIDACVSHPDGLQHAGDLISRMKSVGHDLQADHYNVLIRGFGDARNLGAALNVFQTMREGVAVGGPGGGARSRTLGWEVEEDMFAALVGACTRSGEAENVSEAIGFLRMNGVNPPSEILSYLQNEEFESELYDEIFGEKDRLAGKAKEQRSRGRKYGTHALAAHLIGGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFAEAVRDILRRAEERRKRVERVEEDGGAFPANPRHPVGWVGTFTETFTHAERKEEALKRRAGEARSRERRLKRREAERLAAXXXXXXXXXXXXXXXXXXXXXXXXXAKTVAIPKSIDKPKGGFDAAAESAGGDGARRRGRVGALSAHXXXXXXXXXXXXXXXXXXXGSRLEPRRKPVLVKTGGGGSGVQ--GSLSEEPSPVLEAVVAGLRRKGSNSKGRSRRGSGLSAVPSQPMVKRK 1120          
BLAST of mRNA_C-linearis_contig109.1099.1 vs. uniprot
Match: A0A6H5KDS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDS3_9PHAE)

HSP 1 Score: 196 bits (499), Expect = 6.890e-55
Identity = 95/99 (95.96%), Postives = 97/99 (97.98%), Query Frame = 0
Query: 1411 RASFEQAIDACVSHPDSLQHAGDLISRMKAVGHDLQADHYNVLIRGFGDARNLGAALSVFQTMREGVAVGGPGGGPRSRTLGWEVEEDMFAALVGACTR 1509
            RASFEQAIDACVSHPD LQHAGDLISRMK+VGHDLQADHYNVLIRGFGDARNLGAAL+VFQTMREGVAVGGPGGG RSRTLGWEVEEDMFAALVGACTR
Sbjct:    9 RASFEQAIDACVSHPDGLQHAGDLISRMKSVGHDLQADHYNVLIRGFGDARNLGAALNVFQTMREGVAVGGPGGGARSRTLGWEVEEDMFAALVGACTR 107          
BLAST of mRNA_C-linearis_contig109.1099.1 vs. uniprot
Match: A0A6H5L1W2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1W2_9PHAE)

HSP 1 Score: 207 bits (526), Expect = 4.180e-53
Identity = 280/625 (44.80%), Postives = 322/625 (51.52%), Query Frame = 0
Query:   76 VRHVELTRMVLAMLVSGTATMMLLVGIAPVAEGMRAGPQHHRQGSWRSPVLTSTSISISPSSSCSSISSAFAGAGRRMHDGGLRAPRGGRDSGRESPAMKASSAKRRVVRSESYNSIPMVQAQREASRRGQERAALARKQQEEAEKAASLSG--PTLTATASAPPTTAAVPAALGGLQAPTNKRAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXAGGGIADGDAAKNVAEDVATPTPKREKXXXXXXQRKLEPVGRAEAVELLRQAVVKFRGAQVSAASYSRAPSPPGPAPASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKKNAERGTE-VSVAVPATXXXXXXXXXXXXXXXXXXXXXXXXXXXDSGTV--------------AAEEFAELAARCLGSAVPEIALEA---HSLYVRAA--------------------NXXXXXXXXXXXXXXQDAEISLLVTAARAHIAMGGVLDGLALLDDATDIGGGFGGGAAAALRARGKWGGDGEAGGGLARLGDDDASAVAEELCVSGGSLGLRAALRLRERLSEE 660
            +RH E   + +A  V+ TAT+ LL+G A VAEGMR  P+  ++ SW+         S SP SS     SAF+G  R+  DG   +  GG  +GR    M+A SAKRRV RS+ +NSIPMVQAQR  S    +RA LAR+Q      A  L G  PT TA A++       P+A+ G Q    K+  AA                             GIA     K  A+   T   ++ K      +R LEP+ RA+AVELLRQAVVK+RGAQVSAAS           P SS XXXXXXXXXX    XXXXXXXXXXXXXXXXXXXXXXXXXXX                           XXXXXXXXX                        E GT  +S + P                             +SG+V              AAEEFAELAARCLGSA+PEIALEA   HSLYVRA                     +               DAE+SLLVTAARAHIAMGGVLDG+AL+DDAT IGG  G  AAAALRA G+WGGDG AG GLARLGD DAS VAEELCVSGG  GLRAALRLRERL+EE
Sbjct:    1 MRHFE-RNIQMAAAVTATATLYLLLGTAAVAEGMRVSPR--QRASWQR--------STSPLSS-----SAFSGR-RKAGDGFEASAAGGAAAGRRGMGMRAFSAKRRV-RSDVHNSIPMVQAQRGVS----QRATLARQQXXXXGGAGPLFGVSPTRTAEAASSSGXXXAPSAVAGSQ----KKGVAAQGLAAKRK---------------------GIA-----KKTAQAPTTAKTRKRKGRGWRGRR-LEPIARADAVELLRQAVVKYRGAQVSAAS-----------PTSSSXXXXXXXXXXPVASXXXXXXXXXXXXXXXXXXXXXXXXXXXAYGGSDGTSSYASISDGVVVIGRGVGSXXXXXXXXX--------------------SNGGETGTSRLSSSAPIPPASGDGANAGDTRSSTGNTNIDTSVRVESGSVGSGHDSTAVAAAAVAAEEFAELAARCLGSALPEIALEASVAHSLYVRAEASGLQPRTTALLPEYPLTTDDVDTQDDDDGHWRRRWDAEVSLLVTAARAHIAMGGVLDGIALIDDATAIGG-DGASAAAALRAAGRWGGDGVAGAGLARLGDGDASTVAEELCVSGGDTGLRAALRLRERLAEE 540          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig109.1099.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5L195_9PHAE0.000e+066.87Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LKT0_ECTSI0.000e+067.86Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KDS3_9PHAE6.890e-5595.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L1W2_9PHAE4.180e-5344.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 647..667
NoneNo IPR availableCOILSCoilCoilcoord: 1693..1713
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 1038..1206
coord: 1314..1538
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 107..1878
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..83
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 84..106
NoneNo IPR availableTMHMMTMhelixcoord: 84..106
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 1322..1355
e-value: 9.3E-4
score: 17.2
coord: 1450..1475
e-value: 0.0011
score: 17.0
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 1449..1475
e-value: 0.016
score: 15.4
coord: 1323..1351
e-value: 0.051
score: 13.8
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 1446..1476
score: 7.892
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 1319..1353
score: 10.885
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 1496..1530
score: 7.026
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 1068..1102
score: 6.862
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 1104..1135
score: 6.73
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 1410..1445
score: 5.437
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 1175..1209
score: 7.333
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1266..1375
e-value: 9.2E-10
score: 40.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1034..1148
e-value: 5.1E-11
score: 44.7
coord: 1150..1232
e-value: 4.2E-7
score: 31.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1376..1578
e-value: 6.0E-16
score: 60.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig109contigC-linearis_contig109:160630..177644 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig109.1099.1mRNA_C-linearis_contig109.1099.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig109 160630..177644 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig109.1099.1 ID=prot_C-linearis_contig109.1099.1|Name=mRNA_C-linearis_contig109.1099.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1878bp
MGYLCLDESEVFSFHDLCVHRAAERKPRGQEGRVKGLSLGGFCVLVRSTA
VSFGKRGDLACWAALSATALLTRRHVRHVELTRMVLAMLVSGTATMMLLV
GIAPVAEGMRAGPQHHRQGSWRSPVLTSTSISISPSSSCSSISSAFAGAG
RRMHDGGLRAPRGGRDSGRESPAMKASSAKRRVVRSESYNSIPMVQAQRE
ASRRGQERAALARKQQEEAEKAASLSGPTLTATASAPPTTAAVPAALGGL
QAPTNKRAAAAAAAAVTATAATGATVGAQGSPGKRGKAGGGIADGDAAKN
VAEDVATPTPKREKKKRRRKQRKLEPVGRAEAVELLRQAVVKFRGAQVSA
ASYSRAPSPPGPAPASSAALLPPPSSSPSSSRAASASRSTGAVESVVGGV
NSNGGSGGAKLYASSSGGVVVSGVSSSGGGSGGGGGAGRDSSNLAAAPST
TSGGVVGGSSSSSNDKKNAERGTEVSVAVPATITSSSSAAGAGDGKSGVS
LSGEKEKEKDSGTVAAEEFAELAARCLGSAVPEIALEAHSLYVRAANNNN
NNNNNNNSSRRQDAEISLLVTAARAHIAMGGVLDGLALLDDATDIGGGFG
GGAAAALRARGKWGGDGEAGGGLARLGDDDASAVAEELCVSGGSLGLRAA
LRLRERLSEESRGLTREARLLLLEALAGATGRALGDVVFETTGRGLTLQP
ATKKSSSNSTSTASAAAAAVIAQPDPVWFADLRATARRAWGGGLPVDSHG
GVDLDSPPLALQEMDGSGGAAGGGGGGGGWVPIGARASGAGRAEVDGEGA
LVPEFDERIAARMAQELFLEIAEGKGPGRVSSRAQASLVRANFRSALARS
RGAGPPASLSELADRTLTSFEETDLELALAAGQLVADKLKIIKPAPPATP
NTKTTANADKRKAKRSKNAAGAAAGAAAASYSKKDAQKDAKFTVPNTDED
SEMKAKNSSSDTVSGKAGAASATGHNKEKAKKQKNGGGGGGGTSSSKAEN
AGGGKNQKNKGQEKEKAKPKSAAPASRAGEMGGFWAASTLLQESLACNYT
AGAEIVLETMRKEGHWPRTSTYNTLLWYFRQERDARGALSMLQSLRESKY
VNPDQMSYTLAIQACVWSGSCVDEAWSVVEEAEAAHDYSFASKDLPDARL
ILIQAVGGDVLEGLKDMSGKGVTPDEATLLGVIKACAERGDTKGALDVLQ
MMRGASSSSSYPCPRPSYRSYLAALTACSRVLPAAADDDDPDKKIGDKDV
EGDGAGGTVQQQQERGDWRASKEVLRMMWEDEAKRVAKGDVAVPGTWSAD
LQQALSLGPSHVTMPAVPDAACYRLAMECCVACGRNDEALSLLAEMESRG
LSPNEAALRALIRGFAQEGLDDGGAVGSTAAERAERRWKGVENALGVFEE
LAERFDPPSSRASFEQAIDACVSHPDSLQHAGDLISRMKAVGHDLQADHY
NVLIRGFGDARNLGAALSVFQTMREGVAVGGPGGGPRSRTLGWEVEEDMF
AALVGACTRSGEAENVSEAIGFLRMNGVNPPSEILSYLQNEEFESELYDE
IFGEKDRLAGKGKEQRSRGRKYGTHALAAHLIGAGGVGRGMAAAAVGGGG
ADTETSGRKKGGSGSSTGLGGGRAAGKRGGGAKQRENQTFAEAVRDSLKR
AEARRTKSNKVEEDGGAFPGNPRHPVGWVGTFTETFTHAERKEEALKRRA
GEARSRERRLKRQEAERLAAIAAAGGTGTGAGANPGTSGDGKTSAIPRSI
DKPKGGFDGAAEASGTGDRRTGGALSAHRRRRGGGGGKGDTRSAAAAASG
AGTRYEPRRRPLLVKTGGGGSSGSFSEEPSPALDEVVAGLRRKGSNSKWR
SRRGSGMSAVASQPLVKRKENGGGGGGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf