prot_C-linearis_contig107.1044.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig107.1044.1
Unique Nameprot_C-linearis_contig107.1044.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length1358
Homology
BLAST of mRNA_C-linearis_contig107.1044.1 vs. uniprot
Match: A0A6H5JUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUY5_9PHAE)

HSP 1 Score: 601 bits (1550), Expect = 3.900e-188
Identity = 615/1325 (46.42%), Postives = 723/1325 (54.57%), Query Frame = 0
Query:    8 ERGRRAARGASPSAQLEQRKKSSEPVVDRPSSRKRTRGGGLTHHQRGASASRSFLDPSF--SRSPTNRKRGRPTIEDNLTSAKRTGRDKTKDAGAGAPARPSSSSRKNRVQRRAAGLGT---AP-RSSSPRIGEARASSRAAVSSSVSRAAESEAPPAPAVTPAAAIDAPPSWPFQQQQPQRQTRKRPVDPDKPMKVFIGEDSSSXXXXXXXXXXXNISSASNRSRAKNTSSEYRQAVQTLEAFAHGKNGCKEDASTTMVNGSTREGGDAAPSC--------------SSGSXXXXXXXXXXXXXXXXXXXXGAVLPAKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXPESSAKDNVICPQFRLHNLF--GNAAAGSGDMEGAPRSSGTGSSVASSLGSRRRRPVKTASRAASGAGSMAPPRRGASARGGGG-RETGFLEQTKDVLVRSTQAVLGSDYDMDDEDSAFLEQTNSXXXXXXXXXGSSPRGRSTKGGGSRAGEKGWGAISADLFEAMIERLERQESRARDTMVLVEASLRLKEEHEDAAERVDQFIKEGDAVLNFAAGITEDNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------DGEHQARIMRTRGPVTLTESFALPLLRSCVAA--SLSPPREGASSAAGRGXXXXXXRVRETSRAKGWKGKGKQPALRRGKNSGAEXXXXXXEEDRTGGVSEEQLLAVFRYWSKKREGYGGPMLRCFHPFIMRLWRRMEDPVREAEDQEEGRDPHASPEAFDTLKSFRQDLDKARLVVDCVKRREKLKRSVIRFANAYWKILDDTMDAPRSRAPKSSQPKPAAAAPXTLXXSA------RXSTRMAARATTNGRTKNGAS----GXXXXXXXXXXXXXXXXXXXXXXXXLATAEALEMEDQYDEVVAGHGEEXXXXXXXXXXXXXXXXXXXAAKSKGKAAGLMEQEQGWNAFAQLPSRDGDGAIIPXXXXXXXXXXXXXXXXXXXXXXXKKEDRQRGAIDATNPMRGLFVHRGVLPGDGGGGSSDNYQQGLGSSWASGAQAGVAGKEIPKSSQHRRSANAPRK----APAAQEVKKTXXXXXXXXXXXXXXXXXXXXXXXXFNAASTAALAQQQPKLKQAVSSRHRGRP-----------RLRKPKSEEVEGGXXXXXXXXXXXXXXXSGRPAGSGRGVGRPRGRPRRVCEPDQPESEDKEPEQSKPNRTNAATRRRRNDSRPEDAVQEEAGHTN-TKRRKTTARGSRNPPGRGGTKRGRLEENSNLENAALRSGRQ 1265
            +RGRR+ARG SPSA    RK SSEPV++  SSRKRTRG     HQ+GA   R F D SF  S SP +RKRGR   E+ + ++    R+             SS+++   VQ+     G    AP R SS R+ E+R SSR A + S   ++    P   AV+   A    P+WPF +Q+PQRQTR+RPVDPDK +KV +                 N+SS SN SR +N S+++ QAVQ      HG+   K  AS+ +   S++  G +  S               SS  XXXXXXXXXXXXXXXXXXXX        XXXXXXX                      E++  DNVICPQFRLHNLF  GN    + D +       +G      LG RR+RPVKT + A     SMAPPRR ASA GGGG ++ GFL+QTKD LVRSTQAV GSDYDMDD+D AFL+Q N           S+  G     GG   GEKGW A+SA+LFE MIERLERQESRARDTMVLVEASLRLKEEH DA++RVDQFIKEGDAVLNFAAG+TED+D                                       XXXXXXX                                DGE  ARIMR+RGPVTLT++FALPLLRS V A  S S  R GA++    G      R   + R+KGWKGKGKQPA R G++SG  XXXXXX       VS++QLL VFRYW+KKRE YGGPMLRCFHPFIM+LWRRMEDPVREAEDQEEG+DPHASPEAFDTLKSFRQDLDKARLVVDCVKRREKLKRS IRFANAYWKI DDTMDAPR RAP+ SQPK   A+    XX        R STR AAR TT+G   NG +    G  XXXXXXXXXXXXXXXXXXXXXXLATAE++E E  YD  V    EE      XXXXXXXXXXXX  AK  GKA GL EQEQGWN FAQLP+R      IP                       + E R+R     TNP RGLFVHRGV   D    + D   +   S+     +     + IP + QH+RS N+ +     APA    +K                         FN+AS+AALAQQQ   +                      RLR P+SE V+                    P  +GR   R     R      +      EPE+    R+N   +RR+    PEDA +E       TK RK  ARGS        TKR RL+EN++++N AL + RQ
Sbjct:   27 DRGRRSARGGSPSAP---RKNSSEPVINHSSSRKRTRGS-TRSHQKGAPTPRIFQDRSFQVSPSPRHRKRGRLHKEERIMASSTKTREXXXXXXXRTRGSSSSTAQHGWVQQVTPSSGDVTLAPSRPSSSRMRESRPSSRRAAAGSAPDSSSVVRPGPSAVSETTAAYVAPAWPFLEQKPQRQTRQRPVDPDKLIKVCVERSDGGGD---------NMSS-SNSSRGRNNSAQHNQAVQN-PILDHGE---KYLASSVVNASSSKASGGSGISSRPHSNGIANGTLTSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAQVSATTATGEGGARGEGRETEAAKTDNVICPQFRLHNLFDAGNTITTTADNDDTQSCQTSGKPT---LGPRRKRPVKTEAGATREGRSMAPPRRSASACGGGGEKQVGFLDQTKDALVRSTQAVFGSDYDMDDDDFAFLQQLNGGK--------STGGGSKVATGGDCTGEKGW-AVSANLFEGMIERLERQESRARDTMVLVEASLRLKEEHADASKRVDQFIKEGDAVLNFAAGVTEDDDFSARRGRSGSNGVDGSGGGGAARDVSGGSNSDGHMSDAHXXXXXXXGLRHGCGSTSSTVGRRRKKHTGYVQEEDSDSDDGERHARIMRSRGPVTLTQTFALPLLRSYVTAFKSASDSRRGATNV---GNGLAGARETASRRSKGWKGKGKQPASRSGRSSGXXXXXXXXXXXXX--VSDDQLLDVFRYWAKKREAYGGPMLRCFHPFIMKLWRRMEDPVREAEDQEEGKDPHASPEAFDTLKSFRQDLDKARLVVDCVKRREKLKRSAIRFANAYWKIFDDTMDAPRPRAPRPSQPKVTTASAAXXXXXXXXXXXXRPSTRRAAR-TTSGAVSNGVNVYGGGASXXXXXXXXXXXXXXXXXXXXXXLATAESME-EGDYDAGV----EEQERGGEXXXXXXXXXXXXLPAKLNGKAEGLAEQEQGWNTFAQLPTR---AVAIPTSVRPPRQKKKGPGVQRE-----RNEVRERALQAVTNPARGLFVHRGVAVDDV---AVDRRHERPNST---AVELVERDEGIPGAPQHQRSTNSSKPPGKVAPAVNAEQKIDERARRRER---------------FNSASSAALAQQQASRRXXXXXXXXXXXXXXXXXXXRMHRLRGPQSEVVQADEEQDESAEVQDVEA----PIAAGRASRRGGAGLRDGVAGRRGVGGANEPEKVNEARSNTTKKRRKAAFGPEDAEEESNKFDGATKGRKVMARGSER------TKRRRLDENTSVDNGALSNVRQ 1271          
BLAST of mRNA_C-linearis_contig107.1044.1 vs. uniprot
Match: D7FMY3_ECTSI (Bromodomain and PHD finger containing, 3, isoform CRA_c n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMY3_ECTSI)

HSP 1 Score: 377 bits (967), Expect = 3.150e-109
Identity = 399/981 (40.67%), Postives = 453/981 (46.18%), Query Frame = 0
Query:  337 ESSAKDNVICPQFRLHNLF--GNAAAGSGDMEGAPRSSGTGSSVASSLGSRRRRPVKTASRAASGAGSMAPPRRGASA-RGGGGRETGFLEQTKDVLVRSTQAVLGSDYDMDDEDSAFLEQTNSXXXXXXXXXGSSPRGRSTKGGGSRA------GEKGWGAISADLFEAMIERLERQESRARDTMVLVEASLRLKEEHEDAAERVDQFIKEGDAVLNFAAGITEDNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGEHQARIMRTRGPVTLTESFALPLLRSCVAASLSPPREGASSAAGRGXXXXXXRVRETSRAKGWKGKGKQPALRRGKNSGAEXXXXXXEEDRTGGVSEEQLLAVFRYWSKKREGYGGPMLRCFHPFIMRLWRRMEDPVREAEDQEEGRDPHASPEAFDTLKSFRQDLDKARLVVDCVKRREKLKRSVIRFANAYWKILDDTMDAPRSRAPKSSQPK----PAAAAPXTLXXSARXSTRMA------ARATTNGRTKNGASGXXXXXXXXXXXXXXXXXXXXXXXXLATAEALEMEDQYDEVVAGHGEEXXXXXXXXXXXXXXXXXXXAAKSKGKAAGLMEQEQGWNAFAQLPSRDGDGAIIPXXXXXXXXXXXXXXXXXXXXXXXKKEDRQRGAIDATNPMRGLFVHRGVLPGDGGGGSSDNYQQGLGSSWASGAQAGVAGKEIPKSSQHRRSANAPRKA-PAAQEVKKTXXXXXXXXXXXXXXXXXXXXXXXXFNAASTAALAQQQPKLKQAVSSRHRGRP--------------------------RLRKPKSEEVEGGXXXXXXXXXXXXXXXSG-----RPAGSGRGVGRPRGRPRRVCEPDQPESEDKEPEQSKPNRTNAATRRRRNDSRPEDAVQEEAGHTN-TKRRKTTARGSRNPPGRGGTKRGRLEENSNLENAALRSGRQ 1265
            E++  DNVICPQFRLHNLF  G A             SG  +S   +LG RR+RPVKT + A     SMAPPRR ASA  GGGG++ GFL+QTKD LVRSTQAV GSDYDMDD+D AFLEQ N               GRS  GG   A      GEKGW A+SA+LFE MIERLERQESRARDT           + H  A                                                                                                                     V + L+  RE AS                  R+KGWKGKGKQPA R G++SG  XXXXXX       VS++QLL VFRYW+KKRE YGGPMLRCFHPFIM+LWRRMEDPVREAEDQEEG+DPHASPEAFDTLKSFRQDLDKARLVVDCVKRREKLKRS IRFANAYWKI DDTMDAPR R P+ SQPK    PAA   X  XX   X           + A +NG   +G  GXXXXXXXXXXXXXXXXXXXXXXXX         ED YD  V    EE                    AK  GKA GL EQEQGWN FAQLP+R      IP                       + E R+R      NP RGLFVHRGV  GD    + D   + L S     A+   A   IP + QH+RS N+ + A  AA  V                           FN+AS+AALAQQQ   +                                     RLR+P+SE V+                 +      R  G+G   G    R  R            EPE+    R N   +RR+    PEDA +E       TK R+ TARGS        TKR RL+EN+N+EN AL + RQ
Sbjct:   54 EAAKTDNVICPQFRLHNLFCTGTATTXXXXXXXXDNQSGQ-TSGKPTLGPRRKRPVKTEAGATREGRSMAPPRRSASACGGGGGKQVGFLDQTKDALVRSTQAVFGSDYDMDDDDFAFLEQLNG--------------GRSAGGGSKMATGGVFPGEKGW-AVSANLFEGMIERLERQESRARDTY---------SDTHRGATN-------------------------------------------------------------------------------------------------------------------VGSGLAGARETASR-----------------RSKGWKGKGKQPASRSGRSSGXXXXXXXXXXXXA--VSDDQLLDVFRYWAKKREAYGGPMLRCFHPFIMKLWRRMEDPVREAEDQEEGKDPHASPEAFDTLKSFRQDLDKARLVVDCVKRREKLKRSAIRFANAYWKIFDDTMDAPRPRTPRPSQPKVTTTPAAXXXXXXXXXXXXXXXXXXXXXXXSGAVSNGVNVDG--GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDDYDAGV----EEQEHGGEGEREEEVPLPPPLPAKLNGKAGGLAEQEQGWNTFAQLPTR---AVAIPTSVRPSRQKKKGPGVQRG-----RNEVRERALQAVANPARGLFVHRGVAGGDV---AVDRRHERLNSRAVELAEKDEA---IPGAPQHQRSTNSSKPAGEAAPPVN------------AEEKIDERARRRERFNSASSAALAQQQASRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRLREPQSEVVQADEEQDDSAEVQDLKAPTAAGRVSRRGGAGLRDGVAGRRGVRGAN---------EPEKVNEARNNKTKKRRKAAFGPEDAEEESNNFDGATKGRQVTARGSER------TKRRRLDENTNVENGALSNVRQ 828          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig107.1044.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JUY5_9PHAE3.900e-18846.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FMY3_ECTSI3.150e-10940.67Bromodomain and PHD finger containing, 3, isoform ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 519..539
NoneNo IPR availableCOILSCoilCoilcoord: 492..512
IPR019542Enhancer of polycomb-like, N-terminalPFAMPF10513EPL1coord: 291..504
e-value: 3.5E-7
score: 30.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig107contigC-linearis_contig107:381007..387341 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig107.1044.1mRNA_C-linearis_contig107.1044.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig107 381007..387341 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig107.1044.1 ID=prot_C-linearis_contig107.1044.1|Name=mRNA_C-linearis_contig107.1044.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1358bp
MKATRDRERGRRAARGASPSAQLEQRKKSSEPVVDRPSSRKRTRGGGLTH
HQRGASASRSFLDPSFSRSPTNRKRGRPTIEDNLTSAKRTGRDKTKDAGA
GAPARPSSSSRKNRVQRRAAGLGTAPRSSSPRIGEARASSRAAVSSSVSR
AAESEAPPAPAVTPAAAIDAPPSWPFQQQQPQRQTRKRPVDPDKPMKVFI
GEDSSSSGGRGSGAGSNNISSASNRSRAKNTSSEYRQAVQTLEAFAHGKN
GCKEDASTTMVNGSTREGGDAAPSCSSGSATSSSARRHGARCGGARARGG
AVLPAKAASSDTTTSQQAPKATVSAGGGGGGGSSAPESSAKDNVICPQFR
LHNLFGNAAAGSGDMEGAPRSSGTGSSVASSLGSRRRRPVKTASRAASGA
GSMAPPRRGASARGGGGRETGFLEQTKDVLVRSTQAVLGSDYDMDDEDSA
FLEQTNSSGGGGGGGAGSSPRGRSTKGGGSRAGEKGWGAISADLFEAMIE
RLERQESRARDTMVLVEASLRLKEEHEDAAERVDQFIKEGDAVLNFAAGI
TEDNDSSSGGGGSGSSSSTADGPKSSGNTGGHGDGSGSGSGGGSTSSSNR
RRKKQTGYAQEDDSDSDDGEHQARIMRTRGPVTLTESFALPLLRSCVAAS
LSPPREGASSAAGRGAGAGGARVRETSRAKGWKGKGKQPALRRGKNSGAE
EEEEEVEEDRTGGVSEEQLLAVFRYWSKKREGYGGPMLRCFHPFIMRLWR
RMEDPVREAEDQEEGRDPHASPEAFDTLKSFRQDLDKARLVVDCVKRREK
LKRSVIRFANAYWKILDDTMDAPRSRAPKSSQPKPAAAAPATLPPSARPS
TRMAARATTNGRTKNGASGAAAAAAGRSSGRAAAAAARAAVAALATAEAL
EMEDQYDEVVAGHGEEEGEEEETEDVPPPPPPSQQAAKSKGKAAGLMEQE
QGWNAFAQLPSRDGDGAIIPPPGAAALPARQRKKGAAAAARRGKKEDRQR
GAIDATNPMRGLFVHRGVLPGDGGGGSSDNYQQGLGSSWASGAQAGVAGK
EIPKSSQHRRSANAPRKAPAAQEVKKTAAAEADAAALLAKKNNERARRRE
RFNAASTAALAQQQPKLKQAVSSRHRGRPRLRKPKSEEVEGGEGDVGEVA
APAAPGRSGRPAGSGRGVGRPRGRPRRVCEPDQPESEDKEPEQSKPNRTN
AATRRRRNDSRPEDAVQEEAGHTNTKRRKTTARGSRNPPGRGGTKRGRLE
ENSNLENAALRSGRQREDDDDAAPSSPAASSHTAAVVSKRFKTRASRAAA
AAVVVVDEAPTPPKSALVPPVPGRKGGSGKTATAGGRKSSRFAGDGSSGN
RALACLS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019542Enhancer_polycomb-like_N