prot_C-linearis_contig107.1029.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig107.1029.1
Unique Nameprot_C-linearis_contig107.1029.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length222
Homology
BLAST of mRNA_C-linearis_contig107.1029.1 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI)

HSP 1 Score: 97.1 bits (240), Expect = 6.750e-20
Identity = 73/221 (33.03%), Postives = 113/221 (51.13%), Query Frame = 0
Query:    1 MIPLEVASSLGHFEIVMELVQWYGIARCGGPSGGLTSLCLASKKKCCATMTVLLDAGVVDDGCVLRLAINQSNVRSVKLLLEHRTFGSVNPLARVLMKPHEMRKYLSFNPLVGDPTQTPLFFCFHPEKVTPTSCKIMRLLLDHGADTSQQNLVVDVRGVGITVRNILQYAHFLLFRRGGEYDHTDAEKLRLYGLRGLYRLLMQEEAVHADSWLWPDGAGAG 221
            ++PL+ A+  G+  ++ EL+Q  GI  CGG S G  +L +A + +  A M +L  AGVVD G  L ++       SVK LL++       P A V      +R      PL+       ++ C   E+   +  ++ RLL++ GADT+ +    +  GV +     L+    +L  +  + D T   K RL+ L G+ RLL+Q EAVHA+SWLWP  +G G
Sbjct:  170 LLPLDSAARNGNLLVMRELIQRVGIEGCGGQSRGEVALLMAGEGRRVAAMALLTHAGVVDTGQALTISAGLGREASVKYLLQNHA-KHYGPGAYV-----NVRDRNGTTPLLSS-----IYVCGVDEQ--SSFPRVARLLVEAGADTTTELRRTNSMGVVLFSCTPLKLTVHIL--QDKKVDGTYISKQRLWRLEGIRRLLLQVEAVHAESWLWPSSSGDG 375          
BLAST of mRNA_C-linearis_contig107.1029.1 vs. uniprot
Match: D7FY91_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY91_ECTSI)

HSP 1 Score: 95.5 bits (236), Expect = 3.580e-19
Identity = 75/218 (34.40%), Postives = 108/218 (49.54%), Query Frame = 0
Query:    2 IPLEVASSLGHFEIVMELVQWYGIARCGGPSGGLTSLCLASKKKCCATMTVLLDAGVVDDGCVLRLAINQSNVRSVKLLL-EHRTFGSVNPLARVLMKPHEMRKYLSFNPLVGDPTQTPLFFCFHPEKVTPTSCKIMRLLLDHGADTSQQNLVVDVRGVGITVRNILQYAHFLLFRRGGEYDHTDAEKLRLYGLRGLYRLLMQEEAVHADSWLWPDGA 218
            +PL+VA       +V EL+Q  GI RCGG S G+ +LCLA   +    + +L  AGVVD G  L  A  Q    SVK LL +H    S +  A V    +++ ++    PL+ + T      C H       S +I+RLL+D GADT+    +   +G  +     L     LL  +  + D T  E    + L+  +RLL+Q EA HA SW+WP G+
Sbjct:  189 LPLDVAXXXXXSAVVRELLQRLGIERCGGESRGVDALCLAVTGRHVGIVAMLAHAGVVDQGSALAAAAAQGYEASVKFLLRQHEGKHSASRSAYV----NKLNRF-GLTPLLENIT------CGH------CSARIVRLLVDAGADTTAAYRLTGKKGQAMAATTHLTAMGCLLLEKKAKGD-TGEEP---HNLQATFRLLLQVEAAHAISWVWPTGS 385          
BLAST of mRNA_C-linearis_contig107.1029.1 vs. uniprot
Match: A0A6H5K037_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K037_9PHAE)

HSP 1 Score: 93.2 bits (230), Expect = 1.520e-18
Identity = 79/216 (36.57%), Postives = 109/216 (50.46%), Query Frame = 0
Query:    2 IPLEVASSLGHFEIVMELVQWYGIARCGGPSGGLTSLCLASKKKCCATMTVLLDAGVVDDGCVLRLAINQSNVRSVKLLLEHRTFGSVNPLARVLMKPHEMRKYLSFNPLVGDPT-QTPLFFCFHPEKVTPTSCKIMRLLLDHGADTSQQNLVVDVRGVGITVRNI-LQYA-HFLLFRRGGEYDHTDAEKLRLYGLRGLYRLLMQEEAVHADSWLW 214
            +PL+VA   GH E+V EL    G+  CGG SGG+ SL LA+ ++    M +L   GVVD G  L +A   S   SVK LL+H+  G    +   L                 DP  +TPL      E    +S +I R L+D  ADT +  ++V   G   T R+  L +A H L   + G  + T+ E+LR   L+ ++RLL Q +AVHA SWLW
Sbjct:  172 VPLDVAVQHGHSEVVRELTHQLGVRGCGGVSGGVESLRLATTEQDVDIMGILTVGGVVDTGRALVVAAENSREESVKFLLQHQAGGGAWYVNNTL-----------------DPFGRTPLVCTI--EACGSSSPRIARFLIDAEADT-KSTVLVTKSGQWTTSRDTPLGFATHSLRQNKVGRKNATE-EQLR--SLKAIHRLLSQVDAVHAVSWLW 364          
BLAST of mRNA_C-linearis_contig107.1029.1 vs. uniprot
Match: A0A6H5JHQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHQ8_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 4.670e-15
Identity = 75/227 (33.04%), Postives = 103/227 (45.37%), Query Frame = 0
Query:    2 IPLEVASSLGHFEIVMELVQWYGIARCGGPSGGLTSLCLASKKKCCATMTVLLDAGVVD-DGCVLRLAINQSNVRSVKLLLEHRTFGSVNPLARVLMKPHEMRKYLSFNPLVGDPTQTPLFFCFHPEKVTPTSCKIMRLLLDHGADTSQ--------QNLVVDVRGVGITVRNILQYAHFLLFRRGGEYDHTDAEKLRLYGLRGLYRLLMQEEAVHADSWLWPDGAG 219
            +PL  A   GH ++V ELV WYG  RC    GG+ +L  A+ +K    +T L DAGVVD +G  L  AI   +   V LLL  R  G++N   R  +         +++  V    +TPL   F+         +  RLLL+ GAD +              D   +G  +     Y     FRR   +      +  + GL+G+ RLL QEEAVHA SW WP   G
Sbjct:  162 LPLGTAVYNGHLKVVSELVHWYGTDRCTN-DGGVLALATAASRKHVDIVTFLCDAGVVDTEGVALCAAIEGCSEACVYLLLR-RQGGNINVSTRAYVNMAHGTLPETYDDFVFQ--ETPLVSTFNLGSFHAP--RFARLLLEAGADATSGVRFPCDSDEGEEDEDFIGTPLELATSY-----FRR---FSPMRVHREMVRGLKGVIRLLRQEEAVHAVSWTWPIDTG 374          
BLAST of mRNA_C-linearis_contig107.1029.1 vs. uniprot
Match: A0A6H5JL58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL58_9PHAE)

HSP 1 Score: 77.8 bits (190), Expect = 5.910e-13
Identity = 70/222 (31.53%), Postives = 96/222 (43.24%), Query Frame = 0
Query:    2 IPLEVASSLGHFEIVMELVQWYGIARCGGPSGGLTSLCLASKKKCCATMTVLLDAGVVD-DGCVLRLAINQSNVRSVKLLLEHRTFGSVNPLARVLMKPHEMRKYLSFNPLVGDPTQTPLFFCFHPEKVTPTSCKIMRLLLDHGADTSQQNLVVDVRGVGITVRNILQYAHFLLFRRGGEYDHTDAEKLRLYGLRGLYRLLMQEEAVHADSWLWPDGAGAGA 222
            +PL +A   GH E+V ELV WYG  RC    GG  +L  A+ +K    +  L +AGVVD +G  L  AI   +   V LLL  R  G+ N   R  +         ++   V    +TPL   F+         +  RLLL+ GAD +           G      +     L       +      +  + GL+G+ RLL QEEAVH+ SW WP   G  A
Sbjct:  583 LPLGMAVYHGHLEVVRELVHWYGTDRCTS-DGGALALATAASRKHVDIVAFLCNAGVVDTEGVALCAAIEGCSEACVYLLLR-RQGGNANTGTRAYVNMDHGTLPETYEEFVFQ--ETPLVSTFNLGSFHAP--RFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYVRRFSTMKVHREMVRGLKGVIRLLQQEEAVHSVSWTWPIDTGRSA 798          
BLAST of mRNA_C-linearis_contig107.1029.1 vs. uniprot
Match: A0A6H5KVC2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVC2_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 4.830e-10
Identity = 37/81 (45.68%), Postives = 51/81 (62.96%), Query Frame = 0
Query:    2 IPLEVASSLGHFEIVMELVQWYGIARCGGPSGGLTSLCLASKKKCCATMTVLLDAGVVDDGCVLRLAINQSNVRSVKLLLE 82
            +PL+ A+  GHF +V+EL+Q +GI  CGG SGG+T+L LA+ K     M  L  AGVVD G  L  A +  ++  VK LL+
Sbjct:  204 LPLDTAAQNGHFGVVLELLQRFGIRGCGGASGGVTALQLAAMKSHIDVMIALTTAGVVDTGIALVKATSFDHMDVVKFLLQ 284          
BLAST of mRNA_C-linearis_contig107.1029.1 vs. uniprot
Match: A0A6H5K1W5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1W5_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 1.560e-6
Identity = 64/218 (29.36%), Postives = 90/218 (41.28%), Query Frame = 0
Query:   18 ELVQWYGIARCGGPSGGLTSLCLASKKKCCATMTVLLDAGVVD-DGCVLRLAINQSNVRSVKLLLEHRTFGSVNPLARVLMKPHEMRKYLSFNPLVGDPTQTPLFFCFHPEKVTPT-------SCKIMRLLLDHGADTSQ--------QNLVVDVRGVGITVRNILQYAHFLLFRRGGEYDHTDAEKLRLYGLRGLYRLLMQEEAVHADSWLWPDGAG 219
            ELV WYG   C    GG  +L  A+ +     +T L DAGVVD +G  L  AI   +   V LLL  +   +            + R Y++ +   G   +T   F F    +  T       + +  RLLL+ GAD +              D   +G  +     Y     FRR   +      +  + GL+G+ RLL QEEAVH+ SW WP   G
Sbjct:  568 ELVYWYGTDGCTS-DGGALALATAASRNQVDIVTFLCDAGVVDTEGVALCAAIEGCSEACVYLLLRRQGRKAST----------DSRAYVNMDH--GSLPETYDEFVFQEPPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSY-----FRR---FSPMRVHREMVRGLKGVIRLLRQEEAVHSVSWTWPIDTG 764          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig107.1029.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D8LJF9_ECTSI6.750e-2033.03EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7FY91_ECTSI3.580e-1934.40EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY... [more]
A0A6H5K037_9PHAE1.520e-1836.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHQ8_9PHAE4.670e-1533.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JL58_9PHAE5.910e-1331.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KVC2_9PHAE4.830e-1045.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K1W5_9PHAE1.560e-629.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..172
e-value: 1.8E-10
score: 42.3
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 2..151

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig107contigC-linearis_contig107:172277..172942 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig107.1029.1mRNA_C-linearis_contig107.1029.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig107 170503..172942 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig107.1029.1 ID=prot_C-linearis_contig107.1029.1|Name=mRNA_C-linearis_contig107.1029.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=222bp
MIPLEVASSLGHFEIVMELVQWYGIARCGGPSGGLTSLCLASKKKCCATM
TVLLDAGVVDDGCVLRLAINQSNVRSVKLLLEHRTFGSVNPLARVLMKPH
EMRKYLSFNPLVGDPTQTPLFFCFHPEKVTPTSCKIMRLLLDHGADTSQQ
NLVVDVRGVGITVRNILQYAHFLLFRRGGEYDHTDAEKLRLYGLRGLYRL
LMQEEAVHADSWLWPDGAGAGA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf