prot_C-linearis_contig107.1021.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig107.1021.1
Unique Nameprot_C-linearis_contig107.1021.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length255
Homology
BLAST of mRNA_C-linearis_contig107.1021.1 vs. uniprot
Match: D7FMZ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMZ7_ECTSI)

HSP 1 Score: 410 bits (1054), Expect = 4.210e-143
Identity = 204/254 (80.31%), Postives = 226/254 (88.98%), Query Frame = 0
Query:    1 MDIAVDTEKLEIFGTIITEVKMEGRVPASSHLVYDCSHGEWLLAQMAYDRKIRLFSSRSVRQLGSVSSWLPDNSRFIFSGALVPKQIKRLLKMRGLSAVVARDAESVQTMDEALDVERKRLAAKGLSRISQSRERYLLEKGGGDKGENSQGPVANLVSGLRAFVRLEDGHSVDEVAEMVQTIGETCRNISVVGLWAGDIDPDKSLRMLEAVRAKTGISNLRVAMEHFGPTSAQWFKNTSAPRRGPIMWTFNYEL 254
            +D+ VDTEKLE+FGTIITEVKMEGRVPASSHLVYDCSHGEWLLAQMAYDRKIRLFSSRSVRQL S+SS LPDNSRFIFSGAL+PKQIKR+LKM+GLSAVVARDAESV  M+E++D ERKRLAAKGLSRISQSRERYLLEKGGG+ G N +GPV +LVSGLR FVR+++G SVD+VAE+V TI +TCRNISVVGLW GD+DP+  L MLEAVR K+GISNLRVAMEH GP SA WF      RRGPIMWTFNYEL
Sbjct:   11 IDMEVDTEKLEVFGTIITEVKMEGRVPASSHLVYDCSHGEWLLAQMAYDRKIRLFSSRSVRQLLSISSSLPDNSRFIFSGALIPKQIKRILKMKGLSAVVARDAESVVAMEESIDAERKRLAAKGLSRISQSRERYLLEKGGGENGANQRGPVGSLVSGLRTFVRIQEGQSVDDVAEIVNTIEQTCRNISVVGLWGGDMDPETCLNMLEAVRTKSGISNLRVAMEHLGPKSAGWFTGLRGARRGPIMWTFNYEL 264          
BLAST of mRNA_C-linearis_contig107.1021.1 vs. uniprot
Match: A0A836CMK3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMK3_9STRA)

HSP 1 Score: 183 bits (465), Expect = 2.100e-53
Identity = 98/254 (38.58%), Postives = 155/254 (61.02%), Query Frame = 0
Query:    2 DIAVDTEKLEIFGTIITEVKMEGRVPASSHLVYDCSHGEWLLAQMAYDRKIRLFSSRSVRQLGSVSSWLPDNSRFIFSGALVPKQIKRLLKMRGLSAVVARDAESVQTMDEALDVERKRLAAKGLSRISQSRERYLLEKGGGDKGENSQGPVANLVSGLRAFVRL--EDGHSVDEVAEMVQTIGETCRNISVVGLWAGDIDPDKSLRMLEAVRAKTGISNLRVAMEHFGPTSAQWFKNTSAPRRGPIMWTFNYE 253
            D+  D ++L+   T IT+VK +G VPASS++VYDC+HG+WLL Q+AYDRKI+LF+SRS   +  +++ +PD+++ +F+GA +PK  KRLLK+R L +VV  DA + + + +A+  ER RLAAKGLS++S++RERYL   GG         P   ++  +R F++L  E   +   VA  +  + E C  + V+GLW    +   +  +L+ V+A      L+V + + G   +  +       RG I+WTF +E
Sbjct:   46 DVDFDIDRLDAMNTYITDVKQKGYVPASSNIVYDCTHGQWLLMQVAYDRKIKLFASRSAAGVADLAAIVPDDAQVLFTGAFLPKHAKRLLKLRNLHSVVVPDAAAARALSDAMADERARLAAKGLSKVSRARERYLTAGGGAQLAP----PDTAVLERIRVFLKLPEEGSTTAAAVAATLAEVREGCPGVEVMGLWG---EGRGAYALLQEVKAAVNAPKLKVTLPYRGVEESFKWNQGLGEGRGSIIWTFEFE 292          
BLAST of mRNA_C-linearis_contig107.1021.1 vs. uniprot
Match: A0A6V1VHY5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1VHY5_HETAK)

HSP 1 Score: 72.4 bits (176), Expect = 4.060e-11
Identity = 51/207 (24.64%), Postives = 102/207 (49.28%), Query Frame = 0
Query:    5 VDTEKLEIFGTIITEVKMEGRVPASSHLVYDCSHGEWLLAQMAYDRKIRLFSSRSVRQLGSVSSWLPD--NSRFIFSGALVPKQIKRLLKMRGLSAVVARDAESVQTMDEALDVERKRLAAKGLSRISQSRERYLLEKGGGDKGENSQGPVANLVSGLRAFVRLEDGHSVDEVAEMVQTIGETCRNISVVGLWAGDIDPDKSLRMLE 209
            +D + + +F   IT +K   +   ++ +  +C+  EW+ AQ+A DR I  F SRS   L   +   PD  ++  + +G ++ KQ+KRL K   ++ +   + E    + + L  E  R   K  S++S SR++YL  K G  + +      AN +  LR     +D  +  ++ + ++ I + C N++  G+    ++  ++ R ++
Sbjct:   86 IDGDAINLFNERITTLK---KALPTARICLECTGLEWIFAQIAQDRGIDAFYSRSATALRKYAETAPDVADATLLLTGKVLEKQVKRLAKFPEVNCIAVSNKEEADILSQGLAAEIARAMKKRRSKVSASRDKYLDAKTGDSRAKGYL-ESANYI--LRISSEQQD-KAGQQLLDDIEAIEKDCENLNFHGVILDSVESIETYRAIK 285          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig107.1021.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FMZ7_ECTSI4.210e-14380.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CMK3_9STRA2.100e-5338.58Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6V1VHY5_HETAK4.060e-1124.64Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig107contigC-linearis_contig107:95810..98060 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig107.1021.1mRNA_C-linearis_contig107.1021.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig107 95792..98060 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig107.1021.1 ID=prot_C-linearis_contig107.1021.1|Name=mRNA_C-linearis_contig107.1021.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=255bp
MDIAVDTEKLEIFGTIITEVKMEGRVPASSHLVYDCSHGEWLLAQMAYDR
KIRLFSSRSVRQLGSVSSWLPDNSRFIFSGALVPKQIKRLLKMRGLSAVV
ARDAESVQTMDEALDVERKRLAAKGLSRISQSRERYLLEKGGGDKGENSQ
GPVANLVSGLRAFVRLEDGHSVDEVAEMVQTIGETCRNISVVGLWAGDID
PDKSLRMLEAVRAKTGISNLRVAMEHFGPTSAQWFKNTSAPRRGPIMWTF
NYEL*
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